prot_P-lacustris_contig943.15833.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-lacustris_contig943.15833.1
Unique Name	prot_P-lacustris_contig943.15833.1
Type	polypeptide
Organism	Pleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length	159

Homology

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BLAST of mRNA_P-lacustris_contig943.15833.1 vs. uniprot
Match: D8LS01_ECTSI (UBC core domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS01_ECTSI)

HSP 1 Score: 275 bits (702), Expect = 1.620e-92
Identity = 138/145 (95.17%), Postives = 139/145 (95.86%), Query Frame = 0

Query:    1 MAASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYERGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQASNHALLSAPNPDDPLANDVAEIWKTNEGQALQT 145
            MAASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYE GSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA    LLSAPNPDDPLANDVAE+WKTNE QALQT
Sbjct:    1 MAASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYEHGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA----LLSAPNPDDPLANDVAEMWKTNEAQALQT 141

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BLAST of mRNA_P-lacustris_contig943.15833.1 vs. uniprot
Match: A0A024GCI7_9STRA (UBC core domain-containing protein n=3 Tax=Oomycota TaxID=4762 RepID=A0A024GCI7_9STRA)

HSP 1 Score: 258 bits (660), Expect = 1.930e-86
Identity = 127/152 (83.55%), Postives = 138/152 (90.79%), Query Frame = 0

Query:    3 ASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYERGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQASNHALLSAPNPDDPLANDVAEIWKTNEGQALQTAREWTQRLA 154
            ASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYF VVI GP+ SPYE G FKLELFLP+DYPM+PPKVRFLT++YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA    LLSAPNPDDPLANDVAE WK++E  A++TA +WT+R A
Sbjct:    5 ASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFQVVIAGPQTSPYENGIFKLELFLPADYPMSPPKVRFLTRLYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA----LLSAPNPDDPLANDVAEHWKSDEAGAVRTAADWTRRFA 152

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BLAST of mRNA_P-lacustris_contig943.15833.1 vs. uniprot
Match: H3G9K8_PHYRM (UBC core domain-containing protein n=24 Tax=Oomycota TaxID=4762 RepID=H3G9K8_PHYRM)

HSP 1 Score: 256 bits (654), Expect = 1.430e-85
Identity = 129/152 (84.87%), Postives = 135/152 (88.82%), Query Frame = 0

Query:    3 ASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYERGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQASNHALLSAPNPDDPLANDVAEIWKTNEGQALQTAREWTQRLA 154
            AS LPRRIVKETQRLLAEPV GISATPYEDNLRYF VVI GP+ SPYE G FKLELFLPSDYPMAPPKVRFLT+IYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA    LLSAPNPDDPLANDVA+ WKT+E  A+Q A EWT+R A
Sbjct:    2 ASALPRRIVKETQRLLAEPVAGISATPYEDNLRYFQVVIAGPQSSPYENGIFKLELFLPSDYPMAPPKVRFLTRIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA----LLSAPNPDDPLANDVADHWKTDEAGAVQMAAEWTRRYA 149

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BLAST of mRNA_P-lacustris_contig943.15833.1 vs. uniprot
Match: A0A484ED03_BRELC (UBC core domain-containing protein n=13 Tax=Oomycota TaxID=4762 RepID=A0A484ED03_BRELC)

HSP 1 Score: 253 bits (645), Expect = 3.370e-84
Identity = 127/152 (83.55%), Postives = 134/152 (88.16%), Query Frame = 0

Query:    3 ASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYERGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQASNHALLSAPNPDDPLANDVAEIWKTNEGQALQTAREWTQRLA 154
            A+ LPRRIVKETQRLLAEPV GISATPYEDNLRYF VVI GP+ SPYE G FKLELFLP DYPMAPPKVRFLT+IYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA    LLSAPNPDDPLANDVA+ WKT+E  A+ TA EWT+R A
Sbjct:    2 ATTLPRRIVKETQRLLAEPVAGISATPYEDNLRYFQVVIAGPQSSPYENGIFKLELFLPVDYPMAPPKVRFLTRIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA----LLSAPNPDDPLANDVADHWKTDEVGAVHTAAEWTRRYA 149

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BLAST of mRNA_P-lacustris_contig943.15833.1 vs. uniprot
Match: A0A7S3RBI3_9SPIT (Hypothetical protein (Fragment) n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3RBI3_9SPIT)

HSP 1 Score: 251 bits (642), Expect = 1.350e-83
Identity = 124/152 (81.58%), Postives = 135/152 (88.82%), Query Frame = 0

Query:    3 ASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYERGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQASNHALLSAPNPDDPLANDVAEIWKTNEGQALQTAREWTQRLA 154
            AS LPRRIVKETQRLL+EP PGISATPY DNLRYFNV+I GP+ SPYE G FKLELFLP +YPMAPPKVRFLTK++HPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA    LLSAPNPDDPLANDVAE+WK NE +AL+ A+ WTQ+ A
Sbjct:    9 ASALPRRIVKETQRLLSEPAPGISATPYTDNLRYFNVIIQGPQGSPYEGGIFKLELFLPEEYPMAPPKVRFLTKMFHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA----LLSAPNPDDPLANDVAELWKRNEPKALEEAKTWTQQYA 156

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BLAST of mRNA_P-lacustris_contig943.15833.1 vs. uniprot
Match: A0A139B0U7_GONPJ (Ubiquitin-conjugating enzyme n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139B0U7_GONPJ)

HSP 1 Score: 250 bits (639), Expect = 2.860e-83
Identity = 124/151 (82.12%), Postives = 133/151 (88.08%), Query Frame = 0

Query:    5 NLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYERGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQASNHALLSAPNPDDPLANDVAEIWKTNEGQALQTAREWTQRLAR 155
            NLP+RIVKET+RLLAEP PGISA P+EDNLRYF+VVI GP  SPY+ G FKLELFLP DYPMAPPKVRFLT+IYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA    LLSAPNPDDPLANDVA+ WK NE  ALQTAREWT + A+
Sbjct:    4 NLPKRIVKETERLLAEPAPGISAQPHEDNLRYFDVVIAGPTHSPYDGGMFKLELFLPDDYPMAPPKVRFLTRIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA----LLSAPNPDDPLANDVAQQWKENEKLALQTAREWTGKFAK 150

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BLAST of mRNA_P-lacustris_contig943.15833.1 vs. uniprot
Match: A0A7S3LB23_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LB23_9STRA)

HSP 1 Score: 250 bits (639), Expect = 4.440e-83
Identity = 124/154 (80.52%), Postives = 136/154 (88.31%), Query Frame = 0

Query:    1 MAASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYERGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQASNHALLSAPNPDDPLANDVAEIWKTNEGQALQTAREWTQRLA 154
            MA S LPRRIVKETQRL+AEPV GISATPY+DNLRYF V I GPE SPYERG F+LELFLP+DYPMAPPKVRFLTKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQA    LLSAPNPDDPL N+VAEIWK +E +A++ A+E+TQ  A
Sbjct:    1 MATSQLPRRIVKETQRLIAEPVAGISATPYQDNLRYFAVAIEGPEDSPYERGVFQLELFLPADYPMAPPKVRFLTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQA----LLSAPNPDDPLDNNVAEIWKKDEAEAIRRAKEFTQNFA 150

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BLAST of mRNA_P-lacustris_contig943.15833.1 vs. uniprot
Match: A0A388KXK6_CHABU (UBC core domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KXK6_CHABU)

HSP 1 Score: 249 bits (637), Expect = 7.070e-83
Identity = 123/151 (81.46%), Postives = 134/151 (88.74%), Query Frame = 0

Query:    4 SNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYERGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQASNHALLSAPNPDDPLANDVAEIWKTNEGQALQTAREWTQRLA 154
            SNLPRRI+KETQRLL+EP PGISA+P E+NLRYFNV+I GP QSPYE G FKLELFLP DYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA    LLSAPNPDDPLA ++A+ WKTNE +A+ TAREWT+  A
Sbjct:    7 SNLPRRIIKETQRLLSEPAPGISASPSEENLRYFNVMILGPNQSPYEGGLFKLELFLPEDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA----LLSAPNPDDPLAENIAKHWKTNETEAVATAREWTRMYA 153

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BLAST of mRNA_P-lacustris_contig943.15833.1 vs. uniprot
Match: A0A7D9IZW1_PARCT (Ubiquitin-conjugating enzyme E2 N n=3 Tax=Alcyonacea TaxID=40677 RepID=A0A7D9IZW1_PARCT)

HSP 1 Score: 248 bits (634), Expect = 1.830e-82
Identity = 119/152 (78.29%), Postives = 135/152 (88.82%), Query Frame = 0

Query:    3 ASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYERGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQASNHALLSAPNPDDPLANDVAEIWKTNEGQALQTAREWTQRLA 154
            +  LPRRIVKETQRLLAEPVPGI ATP+E+N RYF+V + GP++SP+E+G FKLELFLP +YPM+PPKVRF TKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA    LLSAPNPDDPLANDVAE+WKTNE +A++TAR+WT   A
Sbjct:    2 SGGLPRRIVKETQRLLAEPVPGIKATPHEENARYFDVFVDGPKESPFEKGCFKLELFLPEEYPMSPPKVRFNTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA----LLSAPNPDDPLANDVAELWKTNEAKAIETARQWTHMYA 149

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BLAST of mRNA_P-lacustris_contig943.15833.1 vs. uniprot
Match: A0A7S0LHS8_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LHS8_9EUKA)

HSP 1 Score: 249 bits (635), Expect = 2.280e-82
Identity = 122/153 (79.74%), Postives = 136/153 (88.89%), Query Frame = 0

Query:    3 ASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYERGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQASNHALLSAPNPDDPLANDVAEIWKTNEGQALQTAREWTQRLAR 155
            A  LPRRI+KETQRLL+EPV GISATPY+DNLR+FNV+I+GP  SPYE G FKLELFLP +YPMAPPKVRF+TKIYHPNID+LGRICLDILKDKWSPALQIRTVLLSIQA    LLSAPNPDDPLANDVAE WK +E +A++TA+EWTQ  AR
Sbjct:   13 ADLLPRRIIKETQRLLSEPVTGISATPYQDNLRHFNVIISGPGSSPYEGGIFKLELFLPEEYPMAPPKVRFMTKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQA----LLSAPNPDDPLANDVAEHWKRDEPEAIKTAKEWTQHYAR 161

The following BLAST results are available for this feature:

BLAST of mRNA_P-lacustris_contig943.15833.1 vs. uniprot

BLAST of mRNA_P-lacustris_contig943.15833.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LS01_ECTSI	1.620e-92	95.17	UBC core domain-containing protein n=1 Tax=Ectocar...	[more]
A0A024GCI7_9STRA	1.930e-86	83.55	UBC core domain-containing protein n=3 Tax=Oomycot...	[more]
H3G9K8_PHYRM	1.430e-85	84.87	UBC core domain-containing protein n=24 Tax=Oomyco...	[more]
A0A484ED03_BRELC	3.370e-84	83.55	UBC core domain-containing protein n=13 Tax=Oomyco...	[more]
A0A7S3RBI3_9SPIT	1.350e-83	81.58	Hypothetical protein (Fragment) n=2 Tax=Choreotric...	[more]
A0A139B0U7_GONPJ	2.860e-83	82.12	Ubiquitin-conjugating enzyme n=1 Tax=Gonapodya pro...	[more]
A0A7S3LB23_9STRA	4.440e-83	80.52	Hypothetical protein n=1 Tax=Amphora coffeiformis ...	[more]
A0A388KXK6_CHABU	7.070e-83	81.46	UBC core domain-containing protein n=1 Tax=Chara b...	[more]
A0A7D9IZW1_PARCT	1.830e-82	78.29	Ubiquitin-conjugating enzyme E2 N n=3 Tax=Alcyonac...	[more]
A0A7S0LHS8_9EUKA	2.280e-82	79.74	Hypothetical protein n=1 Tax=Coccolithus braarudii...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 8..155 e-value: 5.9E-62 score: 221.8
None	No IPR available	PANTHER	PTHR24068	FAMILY NOT NAMED	coord: 2..155
None	No IPR available	PANTHER	PTHR24068:SF263		coord: 2..155
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 9..148 e-value: 3.8E-45 score: 153.0
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBIQUITIN_CONJUGAT_2	coord: 8..144 score: 39.836
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10		coord: 1..157 e-value: 3.0E-64 score: 217.3
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 7..154
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBIQUITIN_CONJUGAT_1	coord: 78..93

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-lacustris_contig943	contig	P-lacustris_contig943:65936..72316 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_93	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-lacustris_contig943.15833.1	mRNA_P-lacustris_contig943.15833.1	Pleurocladia lacustris SAG_25_93	mRNA	P-lacustris_contig943 65854..73565 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-lacustris_contig943.15833.1 ID=prot_P-lacustris_contig943.15833.1|Name=mRNA_P-lacustris_contig943.15833.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=159bp
MAASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYE
RGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPA
LQIRTVLLSIQASNHALLSAPNPDDPLANDVAEIWKTNEGQALQTAREWT
QRLARSSA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000608	UBQ-conjugat_E2
IPR016135	UBQ-conjugating_enzyme/RWD
IPR023313	UBQ-conjugating_AS