prot_P-lacustris_contig942.15828.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig942.15828.1
Unique Nameprot_P-lacustris_contig942.15828.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length666
Homology
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BLAST of mRNA_P-lacustris_contig942.15828.1 vs. uniprot
Match: D8LQ54_ECTSI (Similar to leucine rich repeat containing 44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ54_ECTSI)

HSP 1 Score: 710 bits (1832), Expect = 1.030e-236
Identity = 422/650 (64.92%), Postives = 494/650 (76.00%), Query Frame = 0 
Query:   12 VGMLRRAAAGVPGQALPILRAPAHGYQRGDAVEVSVLRPSEGGGGAWFPAVVDQRNGHGRTYKVTLETGLVEHQAPEDSIRPHDWTGKERALVEMSHIPSRWQPNARSRRTPADRLELELLRRSLPTTTLAKPLLRNKPVELLSDNPRMEAGERIAAEDLRGVIGLEGRGIIPVEPR-VSPGSPVGHVGARRTGVSPPRWAGSQTMSAARTAHGLGAKALEEMVRAAAAADEAAASTTWVPGNRFRVGLEKLVHMTAHDNQDAAEKAELSARRDNVSRARQAERAEPSPRDQVERLKAVEVSIFRRESDEINNRAALEKMMHGHRLKHNAAEARKYMRDGRMLVAEAMEAKLAIHMPIVTKREIEVEEERRRNLNKRTADLHAAKERIAQGRKARGKQGLYLAESSAFTANASQLARHISKHAAISYKAKNASGIRRWVKGQKHHKDDMRRRMLRRVQELQEQKRSEGTRLRRVLAARGRARVAMDEAVVRHRVGQNTPMGS-VLADDVMQVLRPNSRLEGARVEQACDA-RESDHTRIGALREEDDNVPCRPADDRGLEEQGSPDNSGNVDGSTSGRARLFPSKPAVARRS-RELPNRRLRPSGTGKTVVVLANVPTVTRETRSKRSLQGTAGGAALLDSASSRSLILP 657
            +GMLRRAAAG  GQALPIL+ PA G++RGDAVEVS+ R SEG GGAWFPAVVD+RNG+  TYKVTLETG VEH  PE S+RP D TG E ALVEMSHIPSRWQ NARS  TPADRLELELLRRSLPTTT+  P +  +P+ELLS NPR EA   +AAE+LR   GL GRG++  +PR +SPGSPVG    R  G SPPRWAGSQTM+AARTA GL A+ALE++ RAA AAD AAA++TWVPGNRFRVGLEKLV M AH+ QDAA++ ELSARRD VSRARQ ER EPSPRD+VE+LKA EV+IFRRE+DEIN RAALE+ +H H LK NAAEAR+YMRDG+ L AE+++A L     I+ KRE +VEEER+RNL+KR AD+ +AK R+AQ RK   KQ L  AES+AFTANASQLARH+ KHAA+SY+A+N  G+RRW KG K+ ++D RRRMLRRVQELQEQKR EGT+LRRVLAAR RARVAMDEAVVRHRVGQ   MG  VLA+ VM VLRP+   +G + EQ   A  E D +R+G+    D     R     G   +  PDN+  +  S + R   +PSKP   R   RE  +RRLR + TGKTVVVLA+VPTVTRE R+ R LQGT GGAALL S SS S+I P
Sbjct:  893 LGMLRRAAAGEQGQALPILKTPAQGFRRGDAVEVSLFRLSEGRGGAWFPAVVDRRNGYSTTYKVTLETGYVEHHVPEGSMRPRDCTGVEPALVEMSHIPSRWQWNARSLLTPADRLELELLRRSLPTTTMTTPSVGERPLELLSANPRREADACVAAEELRRFNGLGGRGLVLGDPRPISPGSPVGRADPRAMGPSPPRWAGSQTMAAARTAGGLAARALEKVARAAVAADAAAATSTWVPGNRFRVGLEKLVQMAAHEAQDAAKEVELSARRDTVSRARQTERIEPSPRDRVEKLKAAEVAIFRREADEINRRAALERAIHDHELKVNAAEAREYMRDGKRLTAESVKADLENQKCIIKKRESDVEEERQRNLDKRNADVDSAKARVAQRRKDHAKQELRRAESNAFTANASQLARHVRKHAAVSYRAQNTRGMRRWAKGNKNDEEDGRRRMLRRVQELQEQKRKEGTKLRRVLAARSRARVAMDEAVVRHRVGQTVSMGDGVLAETVMHVLRPSGGAQGPKGEQVDVAMHEDDESRLGSFGTGDGGKDPRRV---GSLRERRPDNNVTISSSMATRGGPYPSKPETTRPPLREQTSRRLRANDTGKTVVVLASVPTVTREARASRPLQGT-GGAALLGSTSSHSMISP 1538
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig942.15828.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ54_ECTSI1.030e-23664.92Similar to leucine rich repeat containing 44 n=2 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 276..296

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig942contigP-lacustris_contig942:66646..69196 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig942.15828.1mRNA_P-lacustris_contig942.15828.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig942 60206..69243 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig942.15828.1 ID=prot_P-lacustris_contig942.15828.1|Name=mRNA_P-lacustris_contig942.15828.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=666bp
MAESTRCAADDVGMLRRAAAGVPGQALPILRAPAHGYQRGDAVEVSVLRP
SEGGGGAWFPAVVDQRNGHGRTYKVTLETGLVEHQAPEDSIRPHDWTGKE
RALVEMSHIPSRWQPNARSRRTPADRLELELLRRSLPTTTLAKPLLRNKP
VELLSDNPRMEAGERIAAEDLRGVIGLEGRGIIPVEPRVSPGSPVGHVGA
RRTGVSPPRWAGSQTMSAARTAHGLGAKALEEMVRAAAAADEAAASTTWV
PGNRFRVGLEKLVHMTAHDNQDAAEKAELSARRDNVSRARQAERAEPSPR
DQVERLKAVEVSIFRRESDEINNRAALEKMMHGHRLKHNAAEARKYMRDG
RMLVAEAMEAKLAIHMPIVTKREIEVEEERRRNLNKRTADLHAAKERIAQ
GRKARGKQGLYLAESSAFTANASQLARHISKHAAISYKAKNASGIRRWVK
GQKHHKDDMRRRMLRRVQELQEQKRSEGTRLRRVLAARGRARVAMDEAVV
RHRVGQNTPMGSVLADDVMQVLRPNSRLEGARVEQACDARESDHTRIGAL
REEDDNVPCRPADDRGLEEQGSPDNSGNVDGSTSGRARLFPSKPAVARRS
RELPNRRLRPSGTGKTVVVLANVPTVTRETRSKRSLQGTAGGAALLDSAS
SRSLILPAEMELRRK*
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