prot_P-lacustris_contig941.15819.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig941.15819.1
Unique Nameprot_P-lacustris_contig941.15819.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length118
Homology
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BLAST of mRNA_P-lacustris_contig941.15819.1 vs. uniprot
Match: D8LHU8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHU8_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 1.280e-38
Identity = 85/117 (72.65%), Postives = 91/117 (77.78%), Query Frame = 0 
Query:    1 MGNCCDCFGKNDSTESYIGKTWRRRWWRGGHRLGTAAEYQEXXXXXXXXXXXXXXXVQEEPERIVDPNLTDTERQRQRELRAKAIEDRVQPKKPKVPTSKQEFRNPHNDPNMLQWSV 117
            MGNCCDCFGKND T SY+     R    GG RLGTAA    XXXXXXXXXXXX   VQ+EPERI D NLTD+ERQRQRELRA+A+E R QPKKPK P S QEFRNP+NDPNMLQWSV
Sbjct:    1 MGNCCDCFGKNDGTGSYLHSP--RGGSGGGQRLGTAAXXXXXXXXXXXXXXXXRAAVQDEPERIFDHNLTDSERQRQRELRAQAVEKRSQPKKPKAPASSQEFRNPNNDPNMLQWSV 115
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig941.15819.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHU8_ECTSI1.280e-3872.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig941contigP-lacustris_contig941:33479..38790 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig941.15819.1mRNA_P-lacustris_contig941.15819.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig941 32113..38790 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig941.15819.1 ID=prot_P-lacustris_contig941.15819.1|Name=mRNA_P-lacustris_contig941.15819.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=118bp
MGNCCDCFGKNDSTESYIGKTWRRRWWRGGHRLGTAAEYQEERQRRAEAA
AAARAAVQEEPERIVDPNLTDTERQRQRELRAKAIEDRVQPKKPKVPTSK
QEFRNPHNDPNMLQWSV*
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