prot_P-lacustris_contig94.15811.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-lacustris_contig94.15811.1
Unique Name	prot_P-lacustris_contig94.15811.1
Type	polypeptide
Organism	Pleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length	277

Homology

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BLAST of mRNA_P-lacustris_contig94.15811.1 vs. uniprot
Match: A0A6H5KRY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY1_9PHAE)

HSP 1 Score: 276 bits (705), Expect = 4.520e-86
Identity = 168/256 (65.62%), Postives = 184/256 (71.88%), Query Frame = 0

Query:   30 GGAAFRHSGEGEGGAREGGRRMRGRAAVAALSCAMVLL----IGILG-PPQQRQQAMGLTGVGHKYDSTGG---PRAVADAAASGDMGGVDAEEGSVLGMAASSSMWGVGAPATANWVVESSPVRYRRGLLFNRNNNLRG-AAPTTKSKPAVRRP-LGEPNMLNDFNKDPVDTLDLDDVMDGHLWIPVSLNKFDINTTDPLVKMCQVNYDKYSEAPWLLPMGGLLSIHSGCADIKRDTVQIMRMSTLKRILAESEV 275
            G AA RHSGEGE  AREGGRR +GRAA AALS A+++L    + IL  PPQ RQ AM   GV  K D+T     PR        GD  GV  EEGS +GMAASSSMWGV  PA AN   ES PVRYRRGLLFN N  LRG AA   K+K A  +P +GE  ML+DF K P+DTLDLDDV DGHLWIPVS+NKFD   TDPLVKMCQVNYD YS APWLLPMGGLLSI SGCAD+KRDTVQI+ MSTLKR+L ES V
Sbjct:   23 GAAAPRHSGEGEASAREGGRRTQGRAAAAALSGAVLVLLVAGVAILRVPPQNRQWAMSAVGVDRK-DATSSALDPR--------GDADGVGVEEGSGVGMAASSSMWGVAPPAVANDGSESMPVRYRRGLLFNGNAKLRGGAAAANKAKNAAAKPQVGEHGMLHDFTKTPLDTLDLDDVKDGHLWIPVSVNKFDNLETDPLVKMCQVNYDSYSAAPWLLPMGGLLSIASGCADLKRDTVQIVHMSTLKRLLEESTV 269

The following BLAST results are available for this feature:

BLAST of mRNA_P-lacustris_contig94.15811.1 vs. uniprot

BLAST of mRNA_P-lacustris_contig94.15811.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5KRY1_9PHAE	4.520e-86	65.63	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 73..276
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 55..72
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..54
None	No IPR available	TMHMM	TMhelix		coord: 55..72

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-lacustris_contig94	contig	P-lacustris_contig94:204650..214619 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_93	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-lacustris_contig94.15811.1	mRNA_P-lacustris_contig94.15811.1	Pleurocladia lacustris SAG_25_93	mRNA	P-lacustris_contig94 197366..214748 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-lacustris_contig94.15811.1 ID=prot_P-lacustris_contig94.15811.1|Name=mRNA_P-lacustris_contig94.15811.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=277bp
MAPPKDASSSVTESRCSMQDQQKNTKNAAGGAAFRHSGEGEGGAREGGRR
MRGRAAVAALSCAMVLLIGILGPPQQRQQAMGLTGVGHKYDSTGGPRAVA
DAAASGDMGGVDAEEGSVLGMAASSSMWGVGAPATANWVVESSPVRYRRG
LLFNRNNNLRGAAPTTKSKPAVRRPLGEPNMLNDFNKDPVDTLDLDDVMD
GHLWIPVSLNKFDINTTDPLVKMCQVNYDKYSEAPWLLPMGGLLSIHSGC
ADIKRDTVQIMRMSTLKRILAESEVR*