prot_P-lacustris_contig94.15808.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-lacustris_contig94.15808.1
Unique Name	prot_P-lacustris_contig94.15808.1
Type	polypeptide
Organism	Pleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length	219

Homology

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BLAST of mRNA_P-lacustris_contig94.15808.1 vs. uniprot
Match: A0A6H5L4Y3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y3_9PHAE)

HSP 1 Score: 378 bits (971), Expect = 8.570e-132
Identity = 180/218 (82.57%), Postives = 202/218 (92.66%), Query Frame = 0

Query:    1 MRKRGVDLPIASGGRSPTPPRRQLNMPDATPANVFSFTWVMCGVALLLLGYSHCSRNAEESRLHCAEDVCRFSRDSPGNRSVMEFQFLRESLIKAEVAHINKKGEIVRGKRASRRDKKGMAQTYTVTWKDAETQDETTLPIANYGLGRKAPRVQVARIMKYVQRQIDDLDVKEGRWFTGLGVVCFVFGATLIVLRAAIGSIIPQPPSRRDLSQRKLFK 218
            MRKRGVDLP+ASGGRSPTPPRRQLNMPDATPANVFSFTWV+CG AL+ +GY HCSR++E+SRL+CAEDVCRFSRDS  NRS  EFQFLRESL+KAEVAH++K GE+VRGKRASRR K+GMAQTYTVTWKDAETQDETTLPIA+YGLGRK PR +VARIM+YVQRQIDDLDVKEGRWFTG+G+VCFVFG  LI+LR  +GSI PQPPSRRDLS+R+LFK
Sbjct:    1 MRKRGVDLPMASGGRSPTPPRRQLNMPDATPANVFSFTWVLCGFALICIGYGHCSRHSEQSRLYCAEDVCRFSRDSMENRSRKEFQFLRESLVKAEVAHLDKNGELVRGKRASRRQKRGMAQTYTVTWKDAETQDETTLPIASYGLGRKVPRAKVARIMQYVQRQIDDLDVKEGRWFTGIGIVCFVFGGVLILLRVVVGSIFPQPPSRRDLSRRQLFK 218

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BLAST of mRNA_P-lacustris_contig94.15808.1 vs. uniprot
Match: D7FT18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT18_ECTSI)

HSP 1 Score: 290 bits (743), Expect = 8.620e-98
Identity = 138/170 (81.18%), Postives = 158/170 (92.94%), Query Frame = 0

Query:   49 LGYSHCSRNAEESRLHCAEDVCRFSRDSPGNRSVMEFQFLRESLIKAEVAHINKKGEIVRGKRASRRDKKGMAQTYTVTWKDAETQDETTLPIANYGLGRKAPRVQVARIMKYVQRQIDDLDVKEGRWFTGLGVVCFVFGATLIVLRAAIGSIIPQPPSRRDLSQRKLFK 218
            +GY HCSR++E+SRL+CAEDVCRFSRDS  NRS +EFQFLRESL+KAEVAH++KKGE+VRGKRASRR K+GMAQTYTVTWKDAETQDETTLPIA+YGLGRK PR +VARIM+YVQRQIDDLDVKEGRWFTG+G+VCFVFG  LI+LR  +GSI PQPPSRRDLS+R+LFK
Sbjct:    1 MGYGHCSRHSEQSRLYCAEDVCRFSRDSTENRSRIEFQFLRESLVKAEVAHLDKKGELVRGKRASRRQKRGMAQTYTVTWKDAETQDETTLPIASYGLGRKVPRAKVARIMQYVQRQIDDLDVKEGRWFTGIGIVCFVFGGVLILLRVVVGSIFPQPPSRRDLSRRQLFK 170

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BLAST of mRNA_P-lacustris_contig94.15808.1 vs. uniprot
Match: A0A835YLB3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLB3_9STRA)

HSP 1 Score: 117 bits (292), Expect = 4.860e-29
Identity = 61/176 (34.66%), Postives = 106/176 (60.23%), Query Frame = 0

Query:   26 MPDATPANVFSFTWVMCGVALLLLGYSHCSRNAEESRLHCAEDVCRFSRDSPGNRSVMEFQFLRESLIKAEVAHINKKGEIVRGKRASRRDKKGMAQTYTVTWKDAETQDETTLPIANYGLGRKAPRVQVARIMKYVQRQIDDLDVKEGRWFTGLGVVCFVFGATLIVLRAAIGSI 201
            +P  TP  + S+ W + G+ L + G+  C  N+E SR+ C    C  +    G   + E  F R +L+ AE+  + + GEIV     SR+ ++  A +Y + W DA+ Q     P+++ GLGR+ PR +V  IMKY++R+I ++DV + R+ +G+G++C +FG  L+++RAA+G++
Sbjct:    4 LPKVTPLKLLSWCWTLFGLFLSVFGFLKCRSNSESSRIACDSTDCVVTMVR-GGAVIEETAFPRVNLMSAELVRLYQ-GEIVDPTSLSRQKRRTTASSYAIKWLDAQRQTHMR-PMSSRGLGRQVPRSRVQEIMKYIKREIHEVDVSQARYTSGVGLICCIFGVLLLLMRAAVGNL 176

The following BLAST results are available for this feature:

BLAST of mRNA_P-lacustris_contig94.15808.1 vs. uniprot

BLAST of mRNA_P-lacustris_contig94.15808.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5L4Y3_9PHAE	8.570e-132	82.57	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FT18_ECTSI	8.620e-98	81.18	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A835YLB3_9STRA	4.860e-29	34.66	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 176..202
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 34..52
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 203..218
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..33
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 53..175
None	No IPR available	TMHMM	TMhelix		coord: 176..198
None	No IPR available	TMHMM	TMhelix		coord: 29..51

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-lacustris_contig94	contig	P-lacustris_contig94:175056..178758 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_93	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-lacustris_contig94.15808.1	mRNA_P-lacustris_contig94.15808.1	Pleurocladia lacustris SAG_25_93	mRNA	P-lacustris_contig94 174170..178804 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-lacustris_contig94.15808.1 ID=prot_P-lacustris_contig94.15808.1|Name=mRNA_P-lacustris_contig94.15808.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=219bp
MRKRGVDLPIASGGRSPTPPRRQLNMPDATPANVFSFTWVMCGVALLLLG
YSHCSRNAEESRLHCAEDVCRFSRDSPGNRSVMEFQFLRESLIKAEVAHI
NKKGEIVRGKRASRRDKKGMAQTYTVTWKDAETQDETTLPIANYGLGRKA
PRVQVARIMKYVQRQIDDLDVKEGRWFTGLGVVCFVFGATLIVLRAAIGS
IIPQPPSRRDLSQRKLFK*