prot_P-lacustris_contig94.15804.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig94.15804.1
Unique Nameprot_P-lacustris_contig94.15804.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length439
Homology
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BLAST of mRNA_P-lacustris_contig94.15804.1 vs. uniprot
Match: D7G502_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G502_ECTSI)

HSP 1 Score: 402 bits (1032), Expect = 1.310e-135
Identity = 234/360 (65.00%), Postives = 264/360 (73.33%), Query Frame = 0 
Query:    4 TCLL--LVLFLG-ADGFVGSMPRL-SADFITGQGRCIVPRLALTPPRKPNSGAGAGSAAAGGDDTLGADDMLKTTQRITRAPLRITPNFQPQEKRRPKTNVDRDITYRAFLTEESFDIAAMAWGEFSDFVRRTVERNVNGAQFEFDIRQWSSSIRKWWSRAVELDVQAKADLFLLYDSSVGQRDAWGHQALKVDARVEDEWGSIYVECHDSTDADYKDWSFDCSSSSDELNSDMCGSFGIVSGGVEGATSGTDVGDSRSSRSPTQSASADLSAHLPNNGGRWRTSSGGPSXXXXXXXXXXXMDSCQXXXXXXXXXXXXXXVGGDSNSKGFDEEEIIDCAIRGRWTFPNDDDPVRGRCFVA 359
            TCLL   +LFLG A GF+ S+PRL + D     GRC VPRLALTPPRKPN+GAGAGSAAAGGDD  GA+D+LK+T  ITRAPLRITPNFQPQEKRRPK NVD+D+TY AFLTEESFDIAAMAW EFSDF+RRTVERN+NGAQF+FD RQWSSSIRKWWSRAVE+DVQAKADLF LYDSSVGQRDA G+QALKVDARVEDEW SIYV+C D  D D++DWSFD S                +SGGVEGA +G+DV   RSS S +++    L + L   GG W  S G  S           MD+ Q  XXXXXXXX        + S+GFD+EEIIDCAIRGRWTF N+DDP    CF A
Sbjct:    3 TCLLSAALLFLGGAQGFITSLPRLPTRDITPTPGRCRVPRLALTPPRKPNTGAGAGSAAAGGDDNGGANDVLKSTSGITRAPLRITPNFQPQEKRRPKFNVDKDVTYGAFLTEESFDIAAMAWEEFSDFLRRTVERNLNGAQFDFDTRQWSSSIRKWWSRAVEMDVQAKADLFRLYDSSVGQRDARGNQALKVDARVEDEWDSIYVDCQDVADVDFQDWSFDSS----------------ISGGVEGAATGSDVTGWRSSESSSEA----LPSSLRKEGGGWGASPGSASTGGSRSALMAAMDAFQEEXXXXXXXXEG------TGSEGFDDEEIIDCAIRGRWTFTNNDDP---GCFEA 333
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BLAST of mRNA_P-lacustris_contig94.15804.1 vs. uniprot
Match: A0A836CHX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHX3_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 4.030e-11
Identity = 41/104 (39.42%), Postives = 57/104 (54.81%), Query Frame = 0 
Query:   81 PLRITPNFQPQEKRRPK---TNVDRDI-TYRAFLTEESFDI-----AAMAWGEFSDFVRRTVERNVNGAQFEFDIRQWSSSIRKWWSRAVELDVQAKADLFLLY 175
            PLRI  N  P+    P+      +R+  TY+   T +  ++     AAMA  EF D+V RT+ RN+ G  FEFD RQW +S+ KWW RA+E D  A+ +    Y
Sbjct:   67 PLRIMANLSPRSSGGPRGMRNMQEREFSTYQNAATVDRLNLHFEPMAAMACAEFKDWVARTLARNLEGHAFEFDTRQWQTSVAKWWGRALEADETARLEFARQY 170
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig94.15804.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G502_ECTSI1.310e-13565.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CHX3_9STRA4.030e-1139.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..438
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.773

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig94contigP-lacustris_contig94:133377..139188 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig94.15804.1mRNA_P-lacustris_contig94.15804.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig94 133348..139373 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig94.15804.1 ID=prot_P-lacustris_contig94.15804.1|Name=mRNA_P-lacustris_contig94.15804.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=439bp
MRTTCLLLVLFLGADGFVGSMPRLSADFITGQGRCIVPRLALTPPRKPNS
GAGAGSAAAGGDDTLGADDMLKTTQRITRAPLRITPNFQPQEKRRPKTNV
DRDITYRAFLTEESFDIAAMAWGEFSDFVRRTVERNVNGAQFEFDIRQWS
SSIRKWWSRAVELDVQAKADLFLLYDSSVGQRDAWGHQALKVDARVEDEW
GSIYVECHDSTDADYKDWSFDCSSSSDELNSDMCGSFGIVSGGVEGATSG
TDVGDSRSSRSPTQSASADLSAHLPNNGGRWRTSSGGPSSAGSASALMAA
MDSCQAEDDVKEEEEEEEDVGGDSNSKGFDEEEIIDCAIRGRWTFPNDDD
PVRGRCFVAVFFRGTNLSLGFCLSFFSIQFVRRATRTNSFVLLGVHAQVA
AKYLPGHFASWHVPSNGNEVLSTMCLSSTRYYFAPDAD*
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