prot_P-lacustris_contig937.15783.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig937.15783.1
Unique Nameprot_P-lacustris_contig937.15783.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length328
Homology
BLAST of mRNA_P-lacustris_contig937.15783.1 vs. uniprot
Match: A0A6H5JZT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZT1_9PHAE)

HSP 1 Score: 485 bits (1248), Expect = 2.410e-170
Identity = 243/319 (76.18%), Postives = 282/319 (88.40%), Query Frame = 0
Query:   13 FLAAPVHGFIVP-CPRDVLRTSSSCGNGFLAGDPHA-SEITGSWSHTKGIRAITMTKPSFTQILGTVLIVGSTVGVSALPFLSLGPPE-TRGPTSVRVVDEDGNSFERGVLTAMTRPEIQKKLSQVPVFFLRDDIGAVHVENGEGLFFMSPGDAKEKLQELKGVVGTKVAATTIDDVWFPLIKKKGLNKKPVAAGASGLSDLSASYKIIPRSSQIAQAVETEGWDAVGDAGGVPVWAADTLAFRGSGNSMKMPIFTNVDDLLTSWDRLEKEAGSEEKSPTIRVSSIGAIVDIMQRGG-DNRKLEFFADNEAIEQAEKLL 327
            FL A VHGF+ P C R  LR SSSCGNGFLAG   A   +T S +  +G+R+++MTKP+FT+ LGTVLIVGST+GVSA+PFLSLGP + ++GP +VRVVDEDGN+ ERG+LTAMTRPEIQKKLSQ+PVFFLRD+ GAVHVENGEGLFFMSPGDAKEKLQ+LKG  GTKVAATT+DD+W+PLIKKKGLNKKPVAAGASGLSDLS  Y+IIPRS+Q+AQA+ET+GW+AV DAGGVPVWAA+TLAFRG+GN MK+P+FTNVDDL+TSWDRLE E GSE KSPTI+VSSIGAI+D+MQRGG D R LEFFAD +AIEQAEKLL
Sbjct:   13 FLVASVHGFVAPSCARSALRASSSCGNGFLAGTHEAYGRVTESRNPARGVRSLSMTKPNFTKTLGTVLIVGSTIGVSAIPFLSLGPQQQSKGPKTVRVVDEDGNTSERGILTAMTRPEIQKKLSQIPVFFLRDESGAVHVENGEGLFFMSPGDAKEKLQDLKGAEGTKVAATTLDDIWYPLIKKKGLNKKPVAAGASGLSDLSCRYRIIPRSNQVAQALETQGWNAVADAGGVPVWAAETLAFRGAGNKMKLPLFTNVDDLMTSWDRLETEGGSEAKSPTIQVSSIGAIIDMMQRGGGDQRNLEFFADMDAIEQAEKLL 331          
BLAST of mRNA_P-lacustris_contig937.15783.1 vs. uniprot
Match: D7G9I2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I2_ECTSI)

HSP 1 Score: 404 bits (1038), Expect = 2.240e-129
Identity = 217/319 (68.03%), Postives = 256/319 (80.25%), Query Frame = 0
Query:   13 FLAAPVHGFIVP-CPRDVLRTSSSCGNGFLA-GDPHA-SEITGSWSHTKGIRAITMTKPSFTQILGTVLIVGSTVGVSALPFLSLGPPETRGPTSVRVVDEDGNSFERGVLTAMTRPEIQKKLSQVPVFFLRDDIGAVHVENGEGLFFMSPGDAKEKLQELKGVVGTKVAATTIDDVWFPLIKKKGLNKKPVAAGASGLSDLSASYKIIPRSSQIAQAVETEGWDAVGDAGGVPVWAADTLAFRGSGNSMKMPIFTNVDDLLTSWDRLEKEAGSEEKSPTIRVSSIGAIVDIMQRGG-DNRKLEFFADNEAIEQAEKLL 327
            FL A VHGFI   C R  LR SS+ GNGFLA G   A   +T S +H +G+R ++MTKP+FT+ LGTVLIVGST+GVSA+PFLSLGP +     ++R+       +     T +T P+      ++PVFFLRD+ GAVHVENGEGLFFMSPGDAKEKLQ+LKG  GTKVAATT+DDVW+PLIKKKGLNK  VAAGASGLSDLSA Y+IIPRS+Q+AQA+ET+GW+AV DAGGVPVWAA+TLAFRG+GN MK+P+FTNVDDL+TSWDRLE E GSE KSPTI+VSSIGAI+D+MQRGG D R LEFFAD +AIEQAEKLL
Sbjct:  777 FLVASVHGFIASSCARSALRASSTRGNGFLAVGTQEAYGRVTESRNHARGVRPLSMTKPNFTKTLGTVLIVGSTIGVSAIPFLSLGPQQQ----ALRL-------YALSTKT-VTLPK------EIPVFFLRDESGAVHVENGEGLFFMSPGDAKEKLQDLKGAEGTKVAATTLDDVWYPLIKKKGLNKNSVAAGASGLSDLSARYRIIPRSNQVAQALETQGWNAVADAGGVPVWAAETLAFRGTGNKMKLPLFTNVDDLMTSWDRLETEGGSEAKSPTIQVSSIGAIIDMMQRGGGDQRNLEFFADMDAIEQAEKLL 1077          
BLAST of mRNA_P-lacustris_contig937.15783.1 vs. uniprot
Match: K0RUB9_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RUB9_THAOC)

HSP 1 Score: 85.9 bits (211), Expect = 1.090e-15
Identity = 83/279 (29.75%), Postives = 133/279 (47.67%), Query Frame = 0
Query:   59 GIRAITMTKPSFTQILGTVLIVGSTVGVSALPFLSLGPPETRGPTSVRVVDEDGNSFER--GVLTAMTRPEIQKKLSQVPVFFLRDDIGAVHVENGEGLFFMSPGDAKEKLQELKGVVGTKVAATTIDDVWFPLIKKKG--LNKKPVAAGASGLSDL-----SASYKIIPRSSQIAQAVETEGWDAVGDAGGVPVWAADTLAFRGSGNSMKMPIFTNVDDLLTSWDRLEKEAGSEEKSPTIRVSSIGAIVDIMQRGGDNR--KLEFFADNEAIEQAEKL 326
            G+  +T    SF  +  +V  +   VG       S+    T G  S  VV     S E+      A++   IQ+KL  +PVF+L D  G +     E LF +S  DA     EL   VG  V ATT+D V +PLI KK   +N K +    S +        S  YK++P  + I  A    G + V     +P++  D LAF  S    ++P+FT   D +TS+ RL++ + +    P ++ +S+  +V+ M+ G      +L F+A+ + +++A+KL
Sbjct:    8 GLGTVTAIFASFVLLYFSVSALAPLVG-------SIATQTTTGDLSSSVVTRQDASKEKRQSKFDAVSTQRIQQKLRNIPVFYLSD--GTITATLDERLF-LSYHDA-----ELSRNVGEIVRATTMDQVLYPLILKKEEVVNIKSLGDTPSEVLKAIEARDSKQYKLLPSKAAIEDA---RGTNTVLQPNDLPLFKVDRLAFA-SNEGPQVPLFTERQDAITSYKRLQEGSSTLPPEPVVKSTSLFDVVESMELGSRPGVGQLAFYANADDVQEADKL 267          
BLAST of mRNA_P-lacustris_contig937.15783.1 vs. uniprot
Match: A0A835YYZ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYZ9_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 2.910e-14
Identity = 68/208 (32.69%), Postives = 95/208 (45.67%), Query Frame = 0
Query:   21 FIVP-CPRDVLRTSSSCGN--GFLAGDPHASEITGSWSHTKGIRAITMT----KPSFTQILGTVLIVGSTVGVSALPFLSLGPPETRGPTS----VRVVDEDGNSFERGVLTA------------------MTRPEIQKKLSQVPVFFLRDDIGAVHVE-NGEGLFFMSPGDAKEKLQELKGVVGTK---VAATTIDDVWFPLIKKKG 195
            F+VP   R VL  S++     G      H + +    SH  G  A T+     K S   +   ++ +   VG S +  L+  PP      +    V+V  E G   +RG LT+                  +TR EIQKKLSQ+PVF++ +  G  +V  +G G F+MS  DA   L  L          VAATT+DDVW+PLI +KG
Sbjct:   20 FVVPPTARPVLHRSTTSNGLQGCFVQRIHEAPVASRASHRAGAAARTLRMAEGKASGASVAFVLVALALFVGASVMTLLNAPPPAATSSYAPQGTVKVTTESGRVVQRGALTSVCYFTNTTPGACCHGRRSLTRGEIQKKLSQLPVFYISNAQGGAYVGGDGIGRFYMSADDAAADLAALSDAAAPSELSVAATTLDDVWYPLIARKG 227          
BLAST of mRNA_P-lacustris_contig937.15783.1 vs. uniprot
Match: A0A7S4IB04_9STRA (Hypothetical protein n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IB04_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 4.560e-13
Identity = 80/279 (28.67%), Postives = 134/279 (48.03%), Query Frame = 0
Query:   73 ILGTVLIVGSTV---GVSALPFLSLGPPETRGPTSVRVVDEDGNSFERGVLTAM---------TRPEIQKKLSQVPVFFLRDDIGAVHVENGEGLFFMSPGDAKEKLQELKGVVGTKVAATTIDDVWFPLIKKKGLNK-----KPVAAGASGL----SDLSASYKIIPRSSQIAQAVETEGWDAVGDAGGVPVWAADTLAFRGSGNSMKMPIFTNVDDLLTSWDRLEKEAGSE-EKSPTIRVSSIGAIVDIMQRGGDN--RKLEFFADNEAIEQAEKLL 327
            I+ T+ + G  V   G S  PFL     +T    + ++ +      +   L  M         +R +IQ+KLS +P F+L D  G     +GE   + S  DAK   +    +V     ATT+D V +PL+ K+G  K     + V      +    S  S +YK+IP ++ +  A   +   A GD   VP++ AD +AF  S +  ++P+F   +D +TS+ RL +  G++  + P IR S++   +D M+RG      +L F+A    + QA++L+
Sbjct:  101 IVTTIALAGILVIFLGSSVAPFLDSFNSDTSDSVTSQLANTAVTRQDPDALKQMQYQSKYDRLSRTKIQEKLSGMPAFYLVD--GTTGEMSGE--IYTSYADAKAASEASSSMV----KATTLDQVMYPLVLKRGRTKMAPPPQEVKRAEEAIERHGSAGSKTYKLIPSAAAVEGAAGMKMELANGD---VPLFIADRVAFASS-SGPQVPLFLEKEDAVTSYRRLREAGGNKLPEEPNIRSSTLLEEIDSMERGTRPGVSQLAFYAPERDLIQADELM 367          
BLAST of mRNA_P-lacustris_contig937.15783.1 vs. uniprot
Match: A0A1E7FKF1_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKF1_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 2.990e-9
Identity = 63/216 (29.17%), Postives = 104/216 (48.15%), Query Frame = 0
Query:  122 AMTRPEIQKKLSQVPVFFLRDDIGAVHVENGEGLFFMSPGDAKEKLQELKGVVGTKVAATTIDDVWFPLIKKKGLNK------KPVAAGASGLSDLSASYKIIPRSSQIAQAVETEGWDAVGDAG--GVPVWAADTLAFRGSGNSMKMPIFTNVDDLLTSWDRLEKEAGSEEKSPTIRVSSIGAIVDIMQRG---GDNRKLEFFADNEAIEQAEKL 326
            +++R  IQ+KL+ +PVF++          N     ++S  DA           G+ V  TT+D V +PL+ K+G  +      +   A  + LS+   SY +IP +  I Q  E      VGD     +P++ AD LAF  S    ++P+F +  D + S+ RL     S  + PTIR SS+   +  M++G   G N+ L F+A  + + +  +L
Sbjct:   90 SLSRSAIQEKLNAIPVFYITTSDN----NNMSTDIYLSYEDANNV-----AAGGSIVKGTTLDQVMYPLVLKRGRMRMAPPPSEVELAEKNLLSNNEKSYFLIPSTKAIDQYKEFN----VGDLSKSDIPLFVADRLAFA-SPKGPQLPLFLDKSDCIASYKRLRNGKSSLPEEPTIRTSSLLETLITMEKGTRPGVNQ-LAFYATEQDLTKVAEL 290          
BLAST of mRNA_P-lacustris_contig937.15783.1 vs. uniprot
Match: A0A7S2RCC3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RCC3_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 7.420e-5
Identity = 46/129 (35.66%), Postives = 68/129 (52.71%), Query Frame = 0
Query:  212 SASYKIIPRSSQIAQA---VETEGWD--AVGDAGGVPVWAADTLAF--RGSGNSMKMPIFTNVDDLLTSWDRLE---KEAGSEEKSPTIRVSSIGAIVDIMQRGG---DNRKLEFFADNEAIEQAEKLL 327
            SA ++I P  +Q  +A   +E  G    A  +AG VP++  + +AF  RGSG   K P+F    D L ++ RL    KE    E   +++V  +  ++  MQRG    D R LEF+A  EA+EQA + L
Sbjct:   24 SARFRIAPSPAQTKEAAAVLEERGPAPAAAWEAGDVPLYLINRVAFERRGSGGYEK-PLFLAQSDALDAYKRLREKRKEQQLPEDPTSVQVLGLSRVLAKMQRGELEVDIRGLEFYATQEAVEQAREQL 151          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig937.15783.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JZT1_9PHAE2.410e-17076.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G9I2_ECTSI2.240e-12968.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K0RUB9_THAOC1.090e-1529.75Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A835YYZ9_9STRA2.910e-1432.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4IB04_9STRA4.560e-1328.67Hypothetical protein n=3 Tax=Odontella aurita TaxI... [more]
A0A1E7FKF1_9STRA2.990e-929.17Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S2RCC3_9STRA7.420e-535.66Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.1350.100coord: 122..326
e-value: 1.5E-26
score: 95.0
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..327
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
IPR007378Tic22-likePFAMPF04278Tic22coord: 119..305
e-value: 2.3E-10
score: 40.3
IPR007378Tic22-likePANTHERPTHR33926FAMILY NOT NAMEDcoord: 118..312

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig937contigP-lacustris_contig937:63783..76757 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig937.15783.1mRNA_P-lacustris_contig937.15783.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig937 62926..76988 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig937.15783.1 ID=prot_P-lacustris_contig937.15783.1|Name=mRNA_P-lacustris_contig937.15783.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=328bp
MRSPCALHTPAGFLAAPVHGFIVPCPRDVLRTSSSCGNGFLAGDPHASEI
TGSWSHTKGIRAITMTKPSFTQILGTVLIVGSTVGVSALPFLSLGPPETR
GPTSVRVVDEDGNSFERGVLTAMTRPEIQKKLSQVPVFFLRDDIGAVHVE
NGEGLFFMSPGDAKEKLQELKGVVGTKVAATTIDDVWFPLIKKKGLNKKP
VAAGASGLSDLSASYKIIPRSSQIAQAVETEGWDAVGDAGGVPVWAADTL
AFRGSGNSMKMPIFTNVDDLLTSWDRLEKEAGSEEKSPTIRVSSIGAIVD
IMQRGGDNRKLEFFADNEAIEQAEKLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007378Tic22-like