prot_P-lacustris_contig934.15757.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig934.15757.1
Unique Nameprot_P-lacustris_contig934.15757.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length304
Homology
BLAST of mRNA_P-lacustris_contig934.15757.1 vs. uniprot
Match: D7G7W2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W2_ECTSI)

HSP 1 Score: 231 bits (590), Expect = 1.730e-71
Identity = 169/318 (53.14%), Postives = 195/318 (61.32%), Query Frame = 0
Query:    1 MSSTRKRGACVLFEETLENPLFSRLPFEVESIDIVESVEKRSRIFSATAAATATAVTPD-HSDQDLLHANTRENEDVK-WCTREVLQEAHGREEDN-----------GVDRERRFWFGAWQERQQGGREATGGAR-SQEGKGKGELEVIAEKEAVPTAATGAAGELRSTLVQLKIDAIFAAPGPSPELPTRPKPPLERSCQHGTAGPPERERPACPGASKSALDRAMNVDVDVGGVELMESGEREGGPSCYACRGALGTEGGDILCSFCDRAACRGCWQRCVACEVPHCSLCLAADYSSQFECYFCPPCYQD-RLDSC 303
            MS+TRKRGA  +FE+    PL SRLPFEVE +D     +KR+RI +          +P  H D D+   NT EN + K W TRE LQE H                 G D ER  W G     ++G R+   G R S E   KGE E + ++EAV TAATG AG  R TLVQLKIDA+FA PG    LP  P  P E S ++  A   + E   C G + S  D AM+VDV VG  E  E    EGGP+CYACRGALGT GGDILCSFCDRAAC+ CWQRC ACEVPHCSLCLAADY+SQFECYFCPPCYQD RL+SC
Sbjct:    3 MSTTRKRGAFFVFEK----PLVSRLPFEVE-VDGGVLAKKRARIAATXXXXXXXXXSPPAHEDLDV---NTSENFETKQWWTREALQERHRXXXXXXXXXXXAIAAVGADVERGCWSGGIWGAREGRRDTRAGTRPSLE---KGERECL-DEEAVSTAATGGAGAGR-TLVQLKIDAMFAVPG----LPCTP--PSECSGRNPDAELCDGE---CAGTT-SRGDGAMDVDVGVG-AEPRE----EGGPACYACRGALGTAGGDILCSFCDRAACQACWQRCSACEVPHCSLCLAADYNSQFECYFCPPCYQDERLESC 292          
BLAST of mRNA_P-lacustris_contig934.15757.1 vs. uniprot
Match: A0A6H5LJI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJI1_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 1.780e-71
Identity = 163/318 (51.26%), Postives = 186/318 (58.49%), Query Frame = 0
Query:    1 MSSTRKRGACVLFEETLENPLFSRLPFEVESIDIVESVEKRSRIFSATAAATATAVTPD-HSDQDLLHANTRENEDVK-WCTREVLQEAH-GREEDN----------GVDRERRFWFGA-WQERQQGGREATGGARSQEGKGKGELEVIAEKEAVPTAATGAAGELRSTLVQLKIDAIFAAPGPSPELPTRPKPPLERSCQHGTAGPPERERPACPGASKSALDRAMNVDVDVGGVELMESGEREGGPSCYACRGALGTEGGDILCSFCDRAACRGCWQRCVACEVPHCSLCLAADYSSQFECYFCPPCYQD-RLDSC 303
            MS+TRKRGA  +FE+    PL SRLPFE E +D      KR RI + T   T    +P  H D D+   NT EN + + W TRE LQE H G E D+          G D  R  W G  W  R+  GR+  GG R    + + E     +K+AV TAATG AG  R TLVQLKIDA+FA PG    LP  P         +      E  R  C G      D AM+VDV VG     E GE EGGP+CYACRGALGT GGDILCSFCDRAAC+ CWQRC AC VPHCSLCLAADY+SQFECYFCP CYQD RL+ C
Sbjct:    3 MSTTRKRGAFYVFEK----PLVSRLPFEAE-VDAGGLARKRVRIAATTTTETTRPPSPPAHEDLDV---NTSENVETQHWWTREALQERHRGEEADSCSSSSAIAPVGADVGRGCWLGGRWGAREGSGRDTRGGTRPSMERVEPECP---DKQAVSTAATGGAGPGR-TLVQLKIDAMFAVPG----LPCTPPSECSGRIANAELCDGECARTTCRG------DGAMDVDVGVGA----EPGE-EGGPACYACRGALGTAGGDILCSFCDRAACQACWQRCSACGVPHCSLCLAADYNSQFECYFCPSCYQDKRLECC 293          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig934.15757.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7W2_ECTSI1.730e-7153.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LJI1_9PHAE1.780e-7151.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022773SivaPFAMPF05458Sivacoord: 231..295
e-value: 2.5E-7
score: 30.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig934contigP-lacustris_contig934:24916..26333 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig934.15757.1mRNA_P-lacustris_contig934.15757.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig934 24910..26951 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig934.15757.1 ID=prot_P-lacustris_contig934.15757.1|Name=mRNA_P-lacustris_contig934.15757.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=304bp
MSSTRKRGACVLFEETLENPLFSRLPFEVESIDIVESVEKRSRIFSATAA
ATATAVTPDHSDQDLLHANTRENEDVKWCTREVLQEAHGREEDNGVDRER
RFWFGAWQERQQGGREATGGARSQEGKGKGELEVIAEKEAVPTAATGAAG
ELRSTLVQLKIDAIFAAPGPSPELPTRPKPPLERSCQHGTAGPPERERPA
CPGASKSALDRAMNVDVDVGGVELMESGEREGGPSCYACRGALGTEGGDI
LCSFCDRAACRGCWQRCVACEVPHCSLCLAADYSSQFECYFCPPCYQDRL
DSC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022773Siva