prot_P-lacustris_contig934.15756.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-lacustris_contig934.15756.1
Unique Name	prot_P-lacustris_contig934.15756.1
Type	polypeptide
Organism	Pleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length	141

Homology

[Close]

BLAST of mRNA_P-lacustris_contig934.15756.1 vs. uniprot
Match: A0A6H5L318_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L318_9PHAE)

HSP 1 Score: 249 bits (637), Expect = 1.110e-82
Identity = 122/140 (87.14%), Postives = 131/140 (93.57%), Query Frame = 0

Query:    1 MGVVGRLQASSRRAYPTSMRRARGGALCMDARSCAPEITDDTFEAEVLDENRPVLVFFRAPWCGPCRMVGPIVDEVIAEHGAKLKVLELCTDENPKTVAEFKIRNIPTLMLFNERKSVMTVVGAVPKSALVSSIKKHMDL 140
            +G +GRLQASS+ AYP   RR RG  LCMDA SCAPEITDD+FEAEVLDE+RPVLVFFRAPWCGPCRMVGPIVDEVIA+HG+KLKVLELCTDENPKTVAEFKIRNIPTLMLF++RKSVMTVVGAVPKSALVSSIKKHMDL
Sbjct:   52 VGRIGRLQASSKGAYPPPSRRLRGRGLCMDASSCAPEITDDSFEAEVLDEDRPVLVFFRAPWCGPCRMVGPIVDEVIADHGSKLKVLELCTDENPKTVAEFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMDL 191

[Close]

BLAST of mRNA_P-lacustris_contig934.15756.1 vs. uniprot
Match: D7G7W3_ECTSI (Thioredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W3_ECTSI)

HSP 1 Score: 218 bits (554), Expect = 3.580e-71
Identity = 105/112 (93.75%), Postives = 110/112 (98.21%), Query Frame = 0

Query:   29 MDARSCAPEITDDTFEAEVLDENRPVLVFFRAPWCGPCRMVGPIVDEVIAEHGAKLKVLELCTDENPKTVAEFKIRNIPTLMLFNERKSVMTVVGAVPKSALVSSIKKHMDL 140
            MDARSCAPEITDD+FEAEVLDE+RPVLVFFRA WCGPCRMVGPIVDEVIA+HG KLKVLELCTDENPKTVAEFKIRNIPTLMLF++RKSVMTVVGAVPKSALVSSIKKHMDL
Sbjct:    1 MDARSCAPEITDDSFEAEVLDEDRPVLVFFRAAWCGPCRMVGPIVDEVIADHGGKLKVLELCTDENPKTVAEFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMDL 112

[Close]

BLAST of mRNA_P-lacustris_contig934.15756.1 vs. uniprot
Match: B1X5G8_PAUCH (Thioredoxin n=1 Tax=Paulinella chromatophora TaxID=39717 RepID=B1X5G8_PAUCH)

HSP 1 Score: 132 bits (332), Expect = 2.210e-37
Identity = 64/110 (58.18%), Postives = 81/110 (73.64%), Query Frame = 0

Query:   29 MDARSCAPEITDDTFEAEVLDENRPVLVFFRAPWCGPCRMVGPIVDEVIAEHGAKLKVLELCTDENPKTVAEFKIRNIPTLMLFNERKSVMTVVGAVPKSALVSSIKKHM 138
            M+  S A ++TD +FE E+L  N PVLV F APWCGPCRM+ PIVDE+  E   KLKV +L TDENP   +++ IR+IPTLM+FNE + V TVVGAVPKS L  +I+KH+
Sbjct:    1 MEKMSSAADVTDASFETEILMSNIPVLVDFWAPWCGPCRMLAPIVDEIAKEFEGKLKVFKLNTDENPTIASQYGIRSIPTLMIFNEGQKVDTVVGAVPKSTLSVTIEKHV 110

[Close]

BLAST of mRNA_P-lacustris_contig934.15756.1 vs. uniprot
Match: A0A1C9CAY7_9FLOR (Thioredoxin n=2 Tax=Ahnfeltia TaxID=28022 RepID=A0A1C9CAY7_9FLOR)

HSP 1 Score: 130 bits (327), Expect = 1.090e-36
Identity = 54/100 (54.00%), Postives = 79/100 (79.00%), Query Frame = 0

Query:   40 DDTFEAEVLDENRPVLVFFRAPWCGPCRMVGPIVDEVIAEHGAKLKVLELCTDENPKTVAEFKIRNIPTLMLFNERKSVMTVVGAVPKSALVSSIKKHMD 139
            D +F+ EV++ N+PVLV F APWCGPCRM+ P++DE+  E+G  +KV+++ TD+NP T  E+ IR+IPTLM+FN+ K V TV+GAVPKS L S++ K+++
Sbjct:    2 DSSFQQEVIESNKPVLVDFWAPWCGPCRMIAPVIDEIADEYGQSIKVVKINTDDNPSTATEYGIRSIPTLMIFNDGKRVDTVIGAVPKSTLASTLNKYLN 101

[Close]

BLAST of mRNA_P-lacustris_contig934.15756.1 vs. uniprot
Match: A0A1B7W1G5_APHFL (Thioredoxin n=5 Tax=Nostocales TaxID=1161 RepID=A0A1B7W1G5_APHFL)

HSP 1 Score: 130 bits (327), Expect = 1.230e-36
Identity = 59/106 (55.66%), Postives = 82/106 (77.36%), Query Frame = 0

Query:   33 SCAPEITDDTFEAEVLDENRPVLVFFRAPWCGPCRMVGPIVDEVIAEHGAKLKVLELCTDENPKTVAEFKIRNIPTLMLFNERKSVMTVVGAVPKSALVSSIKKHM 138
            S A  +TD TF+ EVLD   PVLV F APWCGPCRMVGP+VDE+  ++G KLKV+++ TDENP+  +++ IR+IPTLM+F + + V  VVGAVPK+ L ++++KH+
Sbjct:    2 SAAAPVTDSTFKEEVLDSIVPVLVDFWAPWCGPCRMVGPVVDEIADQYGEKLKVVKVNTDENPQIASQYGIRSIPTLMIFKDGQKVDMVVGAVPKTTLSTTVEKHL 107

[Close]

BLAST of mRNA_P-lacustris_contig934.15756.1 vs. uniprot
Match: A0A524RKQ5_9CYAN (Thioredoxin n=2 Tax=Aphanocapsa feldmannii TaxID=192050 RepID=A0A524RKQ5_9CYAN)

HSP 1 Score: 130 bits (326), Expect = 1.600e-36
Identity = 61/106 (57.55%), Postives = 79/106 (74.53%), Query Frame = 0

Query:   33 SCAPEITDDTFEAEVLDENRPVLVFFRAPWCGPCRMVGPIVDEVIAEHGAKLKVLELCTDENPKTVAEFKIRNIPTLMLFNERKSVMTVVGAVPKSALVSSIKKHM 138
            S A  +TDD+FE EVL  + PVL+ F APWCGPCRMV PIVDE+ +E   ++KV++L TDENP   +++ IR+IPTLMLF   + V TVVGAVPK+ L S+I KH+
Sbjct:    2 SSAAAVTDDSFEVEVLKSDIPVLIDFWAPWCGPCRMVAPIVDEIASEFAGRIKVVKLNTDENPNVASQYGIRSIPTLMLFKAGQRVDTVVGAVPKNTLSSTITKHL 107

[Close]

BLAST of mRNA_P-lacustris_contig934.15756.1 vs. uniprot
Match: A0A1G4NTQ2_9FLOR (Thioredoxin n=13 Tax=Nemaliales TaxID=2807 RepID=A0A1G4NTQ2_9FLOR)

HSP 1 Score: 128 bits (321), Expect = 1.010e-35
Identity = 57/103 (55.34%), Postives = 77/103 (74.76%), Query Frame = 0

Query:   37 EITDDTFEAEVLDENRPVLVFFRAPWCGPCRMVGPIVDEVIAEHGAKLKVLELCTDENPKTVAEFKIRNIPTLMLFNERKSVMTVVGAVPKSALVSSIKKHMD 139
            ++ D TF  EVL+ ++PVLV F APWCGPCRMV P+VDE+  E+   +KV++L TDENP T  E+ IR+IPTLM+F +   V TV+GAVPKS L S++ K++D
Sbjct:    5 QVMDSTFNEEVLNHDQPVLVDFWAPWCGPCRMVAPVVDEIAHEYSESIKVVKLNTDENPSTATEYGIRSIPTLMIFKDGGRVDTVIGAVPKSTLASTLNKYLD 107

[Close]

BLAST of mRNA_P-lacustris_contig934.15756.1 vs. uniprot
Match: A0A0C5DCS2_GRALE (Thioredoxin n=5 Tax=Gracilariopsis TaxID=2781 RepID=A0A0C5DCS2_GRALE)

HSP 1 Score: 128 bits (321), Expect = 1.040e-35
Identity = 58/104 (55.77%), Postives = 78/104 (75.00%), Query Frame = 0

Query:   36 PEITDDTFEAEVLDENRPVLVFFRAPWCGPCRMVGPIVDEVIAEHGAKLKVLELCTDENPKTVAEFKIRNIPTLMLFNERKSVMTVVGAVPKSALVSSIKKHMD 139
            P++ D +F  EV+  + PVLV F APWCGPCRMV P+VDE+  E+  KLKV+++ TDENP T  E+ IR+IPTLM+F E K V TV+GAVPKS L  ++KK+++
Sbjct:    4 PQVLDTSFHEEVIKSSCPVLVDFWAPWCGPCRMVAPVVDEIANEYKDKLKVVKINTDENPSTATEYAIRSIPTLMIFIEGKKVDTVIGAVPKSTLAKTLKKYIN 107

[Close]

BLAST of mRNA_P-lacustris_contig934.15756.1 vs. uniprot
Match: A0A4D6BL56_9FLOR (Thioredoxin n=1 Tax=Balbiania investiens TaxID=111861 RepID=A0A4D6BL56_9FLOR)

HSP 1 Score: 127 bits (320), Expect = 1.610e-35
Identity = 56/103 (54.37%), Postives = 76/103 (73.79%), Query Frame = 0

Query:   37 EITDDTFEAEVLDENRPVLVFFRAPWCGPCRMVGPIVDEVIAEHGAKLKVLELCTDENPKTVAEFKIRNIPTLMLFNERKSVMTVVGAVPKSALVSSIKKHMD 139
            ++ D TF+ EVL+   PVLV F APWCGPCRMV P+VDE+  E+   +KV+ + TDENP T  E+ IR+IPTLM+F + K V TV+GAVPKS L +++ K++D
Sbjct:    5 QVIDSTFQEEVLNHKLPVLVDFWAPWCGPCRMVAPVVDEIANEYNGSIKVVTINTDENPSTATEYGIRSIPTLMIFKDGKRVDTVIGAVPKSTLATALNKYLD 107

[Close]

BLAST of mRNA_P-lacustris_contig934.15756.1 vs. uniprot
Match: A0A0T7BS16_9CYAN (Thioredoxin n=6 Tax=Nostocales TaxID=1161 RepID=A0A0T7BS16_9CYAN)

HSP 1 Score: 127 bits (319), Expect = 1.850e-35
Identity = 56/106 (52.83%), Postives = 81/106 (76.42%), Query Frame = 0

Query:   33 SCAPEITDDTFEAEVLDENRPVLVFFRAPWCGPCRMVGPIVDEVIAEHGAKLKVLELCTDENPKTVAEFKIRNIPTLMLFNERKSVMTVVGAVPKSALVSSIKKHM 138
            S A ++TD TF+ EVLD   PVLV F APWCGPCRMV P+VDE+  ++G +LKV+++ TDENP   +++ IR+IPTLM+F + + V  VVGAVPK+ L ++++K++
Sbjct:    2 SAAEQVTDSTFKQEVLDSQVPVLVDFWAPWCGPCRMVAPVVDEISQQYGEQLKVVKVNTDENPNVASQYGIRSIPTLMIFKDGQKVDMVVGAVPKTTLANTVEKYL 107

The following BLAST results are available for this feature:

BLAST of mRNA_P-lacustris_contig934.15756.1 vs. uniprot

BLAST of mRNA_P-lacustris_contig934.15756.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L318_9PHAE	1.110e-82	87.14	Thioredoxin domain-containing protein n=1 Tax=Ecto...	[more]
D7G7W3_ECTSI	3.580e-71	93.75	Thioredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2...	[more]
B1X5G8_PAUCH	2.210e-37	58.18	Thioredoxin n=1 Tax=Paulinella chromatophora TaxID...	[more]
A0A1C9CAY7_9FLOR	1.090e-36	54.00	Thioredoxin n=2 Tax=Ahnfeltia TaxID=28022 RepID=A0...	[more]
A0A1B7W1G5_APHFL	1.230e-36	55.66	Thioredoxin n=5 Tax=Nostocales TaxID=1161 RepID=A0...	[more]
A0A524RKQ5_9CYAN	1.600e-36	57.55	Thioredoxin n=2 Tax=Aphanocapsa feldmannii TaxID=1...	[more]
A0A1G4NTQ2_9FLOR	1.010e-35	55.34	Thioredoxin n=13 Tax=Nemaliales TaxID=2807 RepID=A...	[more]
A0A0C5DCS2_GRALE	1.040e-35	55.77	Thioredoxin n=5 Tax=Gracilariopsis TaxID=2781 RepI...	[more]
A0A4D6BL56_9FLOR	1.610e-35	54.37	Thioredoxin n=1 Tax=Balbiania investiens TaxID=111...	[more]
A0A0T7BS16_9CYAN	1.850e-35	52.83	Thioredoxin n=6 Tax=Nostocales TaxID=1161 RepID=A0...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 102..113 score: 36.06 coord: 54..62 score: 58.83 coord: 62..71 score: 59.22
None	No IPR available	GENE3D	3.40.30.10		coord: 36..139 e-value: 5.5E-29 score: 102.3
None	No IPR available	PANTHER	PTHR45663	FAMILY NOT NAMED	coord: 33..139
None	No IPR available	PANTHER	PTHR45663:SF1		coord: 33..139
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 37..136 e-value: 1.2E-24 score: 86.3
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 29..139 score: 11.582
IPR005746	Thioredoxin	PIRSF	PIRSF000077	Thioredoxin	coord: 32..138 e-value: 5.8E-33 score: 111.0
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 35..139

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-lacustris_contig934	contig	P-lacustris_contig934:22093..24548 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_93	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-lacustris_contig934.15756.1	mRNA_P-lacustris_contig934.15756.1	Pleurocladia lacustris SAG_25_93	mRNA	P-lacustris_contig934 20001..24687 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-lacustris_contig934.15756.1 ID=prot_P-lacustris_contig934.15756.1|Name=mRNA_P-lacustris_contig934.15756.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=141bp
MGVVGRLQASSRRAYPTSMRRARGGALCMDARSCAPEITDDTFEAEVLDE
NRPVLVFFRAPWCGPCRMVGPIVDEVIAEHGAKLKVLELCTDENPKTVAE
FKIRNIPTLMLFNERKSVMTVVGAVPKSALVSSIKKHMDL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013766	Thioredoxin_domain
IPR005746	Thioredoxin
IPR036249	Thioredoxin-like_sf