prot_P-lacustris_contig933.15754.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig933.15754.1
Unique Nameprot_P-lacustris_contig933.15754.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length58
Homology
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BLAST of mRNA_P-lacustris_contig933.15754.1 vs. uniprot
Match: D7G0J2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J2_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 7.870e-17
Identity = 36/58 (62.07%), Postives = 49/58 (84.48%), Query Frame = 0 
Query:    1 VFQLKPDERKNGIMSAAIKELITNNTVKLAGVSVKADLTHVFNSYGVRGTQEVDVGQL 58
            +F LK +ER+ GI+  A+KEL+ N+T++LAGVSV+ DLTH+FNSYGV GT+ VD+GQL
Sbjct:  152 LFHLKYEERRRGILPTALKELLVNDTIQLAGVSVRGDLTHLFNSYGVHGTKPVDIGQL 209
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig933.15754.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0J2_ECTSI7.870e-1762.073'-5' exonuclease domain-containing protein n=1 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig933contigP-lacustris_contig933:79526..79837 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig933.15754.1mRNA_P-lacustris_contig933.15754.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig933 79526..79837 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig933.15754.1 ID=prot_P-lacustris_contig933.15754.1|Name=mRNA_P-lacustris_contig933.15754.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=58bp
VFQLKPDERKNGIMSAAIKELITNNTVKLAGVSVKADLTHVFNSYGVRGT
QEVDVGQL
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