prot_P-lacustris_contig933.15752.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig933.15752.1
Unique Nameprot_P-lacustris_contig933.15752.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length187
Homology
BLAST of mRNA_P-lacustris_contig933.15752.1 vs. uniprot
Match: D8LKN9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKN9_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 4.860e-36
Identity = 86/234 (36.75%), Postives = 121/234 (51.71%), Query Frame = 0
Query:    2 LQALYSISIPIGCLTATHVVDIWVASLPSQL------------------------------------------------------LALNFVGFNITGMINKAKMNASTSASAFYRQAVRALWTQLAALSTAAAIWAAAAVALEPRLGGVGVGTPVIPLSVMVLDASIGFSLAVHFARVGPARVANSALPIPTGNQINTVASPRGGAGGLMSELRSQASDVKSLWAKAGRMSVVP 181
            L+AL SI+ P+ C+   H++D+W+ +LP+QL                                                      +  NFVG N+T +IN AK NA  S+ AFY QA+  L  Q+ AL+ A  +W    VALEP LGGVG  TPVIP ++M+LDA +GFSLAVHFA++GP    +       G Q+N+ ASP GGA  ++S++ ++AS+V S+ A      VVP
Sbjct:  126 LKALCSITFPLVCMAVAHMIDLWINTLPTQLVPADSVAIKVIKLAEKKNLCLWVGWLAIAGLTPFGLLTFFVLDVIKVVRAVNLVICFNFVGVNLTKIINGAKRNAGPSSIAFYEQAIHTLRIQVFALTVAGVVWIVMVVALEPYLGGVGARTPVIPFTIMLLDAFVGFSLAVHFAKIGPTSRQSFNPLNQLGTQMNSAASPWGGARAILSDVGAKASEVMSMLAAPTEKRVVP 359          
BLAST of mRNA_P-lacustris_contig933.15752.1 vs. uniprot
Match: D7FP23_ECTSI (DUF305 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP23_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 5.220e-25
Identity = 57/129 (44.19%), Postives = 85/129 (65.89%), Query Frame = 0
Query:    1 MLQALYSISIPIGCLTATHVVDIWVASLPSQLLALNFVGFNITGMINKAKMNASTSASAFYRQAVRALWTQLAALSTAAAIWAAAAVALEPRLGGVGVGTPVIPLSVMVLDASIGFSLAVHFARVGPAR 129
            +LQALY++S+P+        ++IWV +LP Q+  LN V  N+T +I++AK+NASTSA  FY +A+R LW ++  LS  AA+WAA+ V +E      G  TPV P++ M +DA++ F  A+HFAR+   R
Sbjct:  473 LLQALYAVSMPVVICGGATTIEIWVDALPKQIFLLNMVAVNLTSIISRAKLNASTSARFFYNRALRVLWAEVLTLSLLAAVWAASVVVME--FTQAGRDTPVYPVAAMTIDATVEFCTAIHFARIHATR 599          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig933.15752.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKN9_ECTSI4.860e-3636.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FP23_ECTSI5.220e-2544.19DUF305 domain-containing protein n=1 Tax=Ectocarpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..46
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 47..66
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 90..100
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 124..186
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..89
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 101..123
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
NoneNo IPR availableTMHMMTMhelixcoord: 99..121
NoneNo IPR availableTMHMMTMhelixcoord: 67..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig933contigP-lacustris_contig933:66756..72183 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig933.15752.1mRNA_P-lacustris_contig933.15752.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig933 66259..72255 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig933.15752.1 ID=prot_P-lacustris_contig933.15752.1|Name=mRNA_P-lacustris_contig933.15752.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=187bp
MLQALYSISIPIGCLTATHVVDIWVASLPSQLLALNFVGFNITGMINKAK
MNASTSASAFYRQAVRALWTQLAALSTAAAIWAAAAVALEPRLGGVGVGT
PVIPLSVMVLDASIGFSLAVHFARVGPARVANSALPIPTGNQINTVASPR
GGAGGLMSELRSQASDVKSLWAKAGRMSVVPTIEDG*
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