prot_P-lacustris_contig933.15750.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig933.15750.1
Unique Nameprot_P-lacustris_contig933.15750.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length233
Homology
BLAST of mRNA_P-lacustris_contig933.15750.1 vs. uniprot
Match: D8LKP2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP2_ECTSI)

HSP 1 Score: 302 bits (773), Expect = 1.570e-99
Identity = 147/185 (79.46%), Postives = 164/185 (88.65%), Query Frame = 0
Query:   42 VLLEKDQGGDYLDEKACEPCAAGTFVFEEESTEAGLLYAADPLSCQACPDDNMSFGLDGQCSCKDGYTVLGASSLGPLRCVESSFVNAIASWTGSSASTVTYRSVITSAQAITASSETLTSLTFQHLHTWAGANCYSYTGTGGDGLRACQSLGNLCVLQLHNPSTMACSLFSDVLNNRLGTNHGQ 226
            VLLE  QGGDY+ EKAC+ CAAGTFVFEE STEAG+ YAADPLSCQACPDDNMSFGLDGQCSC DGYT++GAS+LGPLRCV +S V AIA+W GSSASTVTYRS+IT+ Q+    SETLTSLT +HL TWAGA+CYSYTG+GGDGL+ACQSLGNLC LQLH+PS+MACSLFS VLNNRLG NHGQ
Sbjct:    2 VLLETYQGGDYMTEKACQSCAAGTFVFEEASTEAGVSYAADPLSCQACPDDNMSFGLDGQCSCNDGYTIVGASALGPLRCVVTSHVTAIAAWRGSSASTVTYRSLITAVQSTLPPSETLTSLTLEHLFTWAGASCYSYTGSGGDGLQACQSLGNLCALQLHDPSSMACSLFSAVLNNRLGNNHGQ 186          
BLAST of mRNA_P-lacustris_contig933.15750.1 vs. uniprot
Match: A0A7S2BWC1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BWC1_9STRA)

HSP 1 Score: 105 bits (262), Expect = 6.180e-23
Identity = 64/180 (35.56%), Postives = 94/180 (52.22%), Query Frame = 0
Query:   42 VLLEKDQGGDYLDEKACEPCAAGTFVFEEESTEAGLLYAADPLSCQACPDDNMSFGLDGQ-CSCKDGYTVLGASSLGPLRCVESSFVNAIA-SWTGSSASTVTYRSVITSAQAITASSETLTSLTFQHLHTWAGANCYSYTGTGGDGLRACQSLGNLCVLQLHNPSTMACSLFSDVLNNR 219
            VL E D G  Y+  K C  C  GT V   +++ AG+ + A    CQ CPD +M+F   G  C+C D YT  G S  G   CV +   +AI  S+  +SASTV +  +    ++  +    + SL  +H    A  NC+ Y G   + +  CQ+L NLCV+Q++ P +  C LF D+L+ R
Sbjct:  212 VLTEVDDGLGYVINKTCTACTDGTAVITSDASIAGVNFYATDYQCQRCPDPHMTFDSAGTTCTCDDDYTKTGQSLYGQQSCVYTEHSDAIKQSYAETSASTVNFFKIQADQESSPSGELEMESLVMKHHFLNASTNCFYYNGP--ENIANCQTLANLCVMQMYWPDSEVCELFEDILDKR 389          
BLAST of mRNA_P-lacustris_contig933.15750.1 vs. uniprot
Match: T0S4L0_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S4L0_SAPDV)

HSP 1 Score: 83.6 bits (205), Expect = 8.390e-15
Identity = 65/188 (34.57%), Postives = 93/188 (49.47%), Query Frame = 0
Query:   42 VLLEKDQGGDYLDEKACEPCAAGTFVFEEESTEAGLLYAADPLSCQACPDDNMSFGLDGQCSCKDGYTVLGASSLGPLRCVESSFVNAI-ASWTGSSASTVTYRSVITSAQAITASSETLTSLTFQHLHTWAGANCYSYTGTGGDGLRACQSLGNLCVLQLHNPSTMACSLFSDVLNN-RLGTNHGQA 227
            VL+++      L  K C PC  G+               A    C  CP D +S G +G C C+ G+   G +++G LRCV+   V+AI A +   SA+ VT+             S T TS  F+H  T A   CY Y+    +G  ACQ+LGNLCVLQ+   S+ ACSL   + ++ RL T++G +
Sbjct:  122 VLVDRYANATLLAAKTCLPCNNGS-------------VDASGYVCTLCPVDMLS-GSNG-CVCRPGFVSTGIAAIGLLRCVDQGNVSAITAMYPLQSATQVTFADA----------SRTFTSAIFEHYFTSAAVGCYYYSNEDNNG--ACQTLGNLCVLQMFASSSAACSLLRQLASSSRLTTSNGMS 282          
BLAST of mRNA_P-lacustris_contig933.15750.1 vs. uniprot
Match: A0A067C9X5_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C9X5_SAPPC)

HSP 1 Score: 72.4 bits (176), Expect = 5.440e-11
Identity = 57/195 (29.23%), Postives = 90/195 (46.15%), Query Frame = 0
Query:   42 VLLEKDQGGDYLDEKACEPCAAGTFVFEEESTEAGLLYAADPLSCQACPDDNMSFGLDGQCSCKDGYTVLGASSLGPLRCVESSFVNAIASWTGSSASTV----------TYRSVITSAQAITASSETLTSLTFQHLHTWAGANCYSYTGTGGDGLRACQSLGNLCVLQLHNPSTMACSLFSDVLNN-RLGTNHG 225
            VL+++      L  K C PC  G+               A    C  CP D ++      C+C+ G+   G ++LGPL CV+   V+AI +     ++T+          T+ S     Q+ + +   +     +H  T A   CY Y+    +G  ACQ+LGNLCVLQ+   S+ ACSL   + ++ RL T++G
Sbjct:   76 VLVDRHANATPLAAKTCLPCTNGS-------------VDASGYVCTPCPVDMLATSQG--CACRPGFVNTGIAALGPLTCVDQGNVSAITAMYPLQSATLVSFPDASTPRTFTSGAIVEQSSSCAFNAVVVAILEHYFTSAAIGCYYYSNEDNNG--ACQTLGNLCVLQMFATSSAACSLLRQLASSSRLTTSNG 253          
BLAST of mRNA_P-lacustris_contig933.15750.1 vs. uniprot
Match: A0A1W0A6X7_9STRA (Transmembrane protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6X7_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 4.940e-9
Identity = 51/150 (34.00%), Postives = 73/150 (48.67%), Query Frame = 0
Query:   85 SCQACPDDNMSFGLDGQCSCKDGYTVLGASSLGPLRCVESSFVNAIASWTGSSAST-VTYRSVITSAQAITASSETLTSLTFQHLHTWAGANCYSYTGTGGDGLRACQSLGNLCVLQLHNPSTMACSLFSDVL-NNRLGTNHGQASARDT 232
            +C  C  + ++   D  C C  GY   G S+ GP  C+  +   AI S      ST VTY+    S       + T TS   +H    +  NCY Y+    D   ACQ LGNLCVLQ+ +P+T AC+L   +  ++RL T +G +   +T
Sbjct:  102 ACLPCGANMVAGSTD--CHCITGYMSTGVSTFGPSSCISQANQTAITSIYPLQKSTQVTYQDFSNSL------TMTFTSALMEHYFLSSAINCYYYSNE--DSNTACQVLGNLCVLQMFDPTTSACALLQQLAASSRLTTTNGMSGWSNT 241          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig933.15750.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LKP2_ECTSI1.570e-9979.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2BWC1_9STRA6.180e-2335.56Hypothetical protein (Fragment) n=2 Tax=Florenciel... [more]
T0S4L0_SAPDV8.390e-1534.57Uncharacterized protein n=2 Tax=Saprolegnia diclin... [more]
A0A067C9X5_SAPPC5.440e-1129.23Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A1W0A6X7_9STRA4.940e-934.00Transmembrane protein n=1 Tax=Thraustotheca clavat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019170MeckelinPFAMPF09773Meckelincoord: 100..217
e-value: 3.6E-8
score: 32.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig933contigP-lacustris_contig933:40305..43537 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig933.15750.1mRNA_P-lacustris_contig933.15750.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig933 40305..43537 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig933.15750.1 ID=prot_P-lacustris_contig933.15750.1|Name=mRNA_P-lacustris_contig933.15750.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=233bp
VLFAPLARSPPKRRFPTAPHAWHADRARPGLEERNADGFTEVLLEKDQGG
DYLDEKACEPCAAGTFVFEEESTEAGLLYAADPLSCQACPDDNMSFGLDG
QCSCKDGYTVLGASSLGPLRCVESSFVNAIASWTGSSASTVTYRSVITSA
QAITASSETLTSLTFQHLHTWAGANCYSYTGTGGDGLRACQSLGNLCVLQ
LHNPSTMACSLFSDVLNNRLGTNHGQASARDT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019170Meckelin