prot_P-lacustris_contig931.15740.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig931.15740.1
Unique Nameprot_P-lacustris_contig931.15740.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length323
Homology
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BLAST of mRNA_P-lacustris_contig931.15740.1 vs. uniprot
Match: D8LR43_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LR43_ECTSI)

HSP 1 Score: 276 bits (707), Expect = 2.520e-88
Identity = 208/311 (66.88%), Postives = 231/311 (74.28%), Query Frame = 0 
Query:   17 LGRGQSCCSQDSHCTDQMSTADIEYQSQFGKTLECDQGCPGKINCNMFGICEQCRGCFETCEGAIMFMEATSSPAEFINFCTGIGIADISECNDEM--SGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGGVSGKMLTSSTPFCAFSVPGATGSGIGSGSAGVSSDGXXXXXXXXXXXXXXRRFSSSGXXXXXXXXXXXXXXXXXXXS---RVADIPGCDCGTAELDPSFAAYFCENNKSMYCDLECVDDPDPADVLFPDMGGLWCQPGGWEGCRTCKFDCENYDGDGCVPCPADVQNWC 322
            LG  QSCCSQDS CT+ +S ADIE+ S F KT+ECDQ CPG INCNMFGICEQCRGCFETCEGA++FME T SPAE+I FC+GIGIAD+++C D++  SG+XXXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXX                                   V    XXXXXXXXXXXXXX   +S  XXXXXXXXXXXXXXXXXXX    RVA+I GCDCGTAEL+P+FAAYFCEN KSMYCDLECVD  DP DVLFP MGGLWCQP GWEGCR CKFDC +Y+GD CVPCP+ ++NWC
Sbjct:   21 LGSAQSCCSQDSDCTELLSPADIEHNSIFSKTVECDQDCPGLINCNMFGICEQCRGCFETCEGAMLFMEKTGSPAEYITFCSGIGIADMAQCEDDVYGSGAXXXXXXXXXXXXXXXXXXXGGSEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXTGIASXXXXXXXXXXXXXXXXXXXXXXXXXRVAEIEGCDCGTAELEPAFAAYFCENGKSMYCDLECVDGSDPDDVLFPSMGGLWCQPEGWEGCRMCKFDCTDYEGDFCVPCPSGLKNWC 331
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig931.15740.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LR43_ECTSI2.520e-8866.88Uncharacterized protein n=3 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..322
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.527

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig931contigP-lacustris_contig931:56240..63590 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig931.15740.1mRNA_P-lacustris_contig931.15740.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig931 55977..64814 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig931.15740.1 ID=prot_P-lacustris_contig931.15740.1|Name=mRNA_P-lacustris_contig931.15740.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=323bp
MKLALSAAAVAGYVVGLGRGQSCCSQDSHCTDQMSTADIEYQSQFGKTLE
CDQGCPGKINCNMFGICEQCRGCFETCEGAIMFMEATSSPAEFINFCTGI
GIADISECNDEMSGSGFGSGSTSSGSHGSGSGSGVGVGSGSRSSGSASGA
GSASGGVSGKMLTSSTPFCAFSVPGATGSGIGSGSAGVSSDGYASGAGSG
SGAISGRRFSSSGSGEGSGTGSMATASGSGDGSRVADIPGCDCGTAELDP
SFAAYFCENNKSMYCDLECVDDPDPADVLFPDMGGLWCQPGGWEGCRTCK
FDCENYDGDGCVPCPADVQNWC*
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