prot_P-lacustris_contig930.15733.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig930.15733.1
Unique Nameprot_P-lacustris_contig930.15733.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length193
Homology
BLAST of mRNA_P-lacustris_contig930.15733.1 vs. uniprot
Match: A0A6H5JBE3_9PHAE (PSII_Pbs31 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JBE3_9PHAE)

HSP 1 Score: 297 bits (760), Expect = 1.710e-100
Identity = 168/192 (87.50%), Postives = 180/192 (93.75%), Query Frame = 0
Query:    1 MKTACVALALLGSSSAFVVPMPNVRTCSSSSTSLAMSSEPMSRSQAISHIFGATAALAAAASVPSVAFADGAKSLATQARARGIYGSRIAALKGAVDKGDSAAILEQQNAFRLFNSGVYSTDKSKFAKAEELAKSVVSAASKGDAKALKDSYAEYMKYTEKKSGYDGAGDGQGFGSEFDYKNRTPQGTVYQR 192
            MKTACVALALLGSSSAFVVPM NVRT SSSSTSLAMSSEPM+RSQA+S++FGATAA+AAAA+VP VAFADGAKS ATQARARGIYG+RIAALKGAVDKGD+AAIL +QN FRLFNSGVYSTDK+KFA+AE LAKSVV AA  GDAKALKDSYA YMKYTEKKSGY+GAGDGQGFGSEFDYKNRTP GTVYQR
Sbjct:    1 MKTACVALALLGSSSAFVVPMANVRTTSSSSTSLAMSSEPMTRSQALSNLFGATAAVAAAAAVPGVAFADGAKSPATQARARGIYGNRIAALKGAVDKGDTAAILAEQNCFRLFNSGVYSTDKAKFAEAEALAKSVVQAAGAGDAKALKDSYAAYMKYTEKKSGYNGAGDGQGFGSEFDYKNRTPLGTVYQR 192          
BLAST of mRNA_P-lacustris_contig930.15733.1 vs. uniprot
Match: B8CC14_THAPS (PSII_Pbs31 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CC14_THAPS)

HSP 1 Score: 103 bits (256), Expect = 2.390e-24
Identity = 83/187 (44.39%), Postives = 113/187 (60.43%), Query Frame = 0
Query:    6 VALALLGSSSAFVVPMPNVRTCSSSSTSLAMSSEPMSRSQAISHIFGATAALAAAASVPSVAFADGAKSLATQARARGIYGSRIAALKGAVDKGDSAAILEQQNAFRLFNSGVYSTDKSKFAKAEELAKSVVSAASKGDAKALKDSYAEYMKYTEKKSGYDGAGDGQGFGSEFDYKNRTPQGTVYQR 192
            +AL L+ S++AF  P P  R    +STSL      M R  A + I  + A LA    +PS+A ADGAKS ATQ+RARGIYG RIAAL+ AV+ GD  A+  ++NAF LFNSG  + DKSK ++A +   ++ +A    DA ALK +YA Y    + K        GQG+ +++D+K RT  GT+Y R
Sbjct:    4 IALCLVASAAAFA-PAPVER----ASTSL-----NMDRRMATAQIATSAAVLAG---LPSLALADGAKSAATQSRARGIYGQRIAALESAVNAGDFGAVAAEKNAFILFNSGAIA-DKSKKSEAVKQTNAIFAAIRAKDAGALKSAYATYKGANDIKVIVADKESGQGYSNDYDFKARTTLGTIYVR 176          
BLAST of mRNA_P-lacustris_contig930.15733.1 vs. uniprot
Match: B6ZHE7_9STRA (Extrinsic protein in photosystem II n=1 Tax=Chaetoceros gracilis TaxID=184592 RepID=B6ZHE7_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 6.230e-22
Identity = 64/133 (48.12%), Postives = 82/133 (61.65%), Query Frame = 0
Query:   61 ASVPSVAFADGAKSLATQARARGIYGSRIAALKGAVDKGDSAAILEQQNAFRLFNSGVYSTDKSKFAKAEELAKSVVSAASKGDAKALKDSYAEYMKYTEKKSGYD-GAGDGQGFGSEFDYKNRTPQGTVYQR 192
            A +PS+A ADGA S AT  RARG+YG RIAALK AV  GD  AI E++NAF LFNSG Y T+K+K   A      +  A   GD  A+K +Y  YM   E +   +  +  GQG+ SEFD+++RT  G +Y R
Sbjct:   47 AGIPSIASADGAVSSATINRARGLYGDRIAALKDAVAAGDFKAIAEEKNAFILFNSGAYPTNKAKKNAAIAQTNEIFKAIRSGDKAAVKSAYDAYMAANEIRPLPEINSNVGQGYSSEFDFRSRTKAGAIYVR 179          
BLAST of mRNA_P-lacustris_contig930.15733.1 vs. uniprot
Match: A0A7S2C001_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C001_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 7.690e-22
Identity = 83/197 (42.13%), Postives = 120/197 (60.91%), Query Frame = 0
Query:    1 MKTACVALALLGSSSAFVVPMPNVRTCSSSSTSLAMSSEPMSRSQAISHIFGATAALAAAASVPSVAFADGAKSLATQARARGIYGSRIAALKGAVDKGDSAAILEQQNAFRLFNSGVYSTDKSKFAKAEELAK--SVVSAASKGDAKALKDSYAEYMKYTEKKS-GYDG--AGDGQGFGSEFDYKNRTPQGTVYQR 192
            M++  VALALL S+SAF   +   R      ++++MS+E + R   I+   G    + A A     A ADGA SLAT AR+RGIYG+R+A L GAV+KGD  A+L ++NAF LFN+   +  K+K  K     K  +V++AA+KGD  ALK +YA+Y+K     +  Y G  A   QG+ +++D+K RT +GT+Y R
Sbjct:   16 MRSFIVALALLASASAFSPTILRAR------STVSMSAENVDRRGMITKTAGVLGGVFAGAQA---ANADGAVSLATMARSRGIYGTRVADLAGAVEKGDFEAVLAEKNAFVLFNNS-NNRPKNKEEKKINAVKQEAVLAAAAKGDKAALKAAYADYIKTASLPNPAYKGRDADYSQGYSNDYDWKARTNRGTIYVR 202          
BLAST of mRNA_P-lacustris_contig930.15733.1 vs. uniprot
Match: A0A7S2S7V4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7V4_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.130e-21
Identity = 75/167 (44.91%), Postives = 101/167 (60.48%), Query Frame = 0
Query:   33 SLAMSSEPMSRSQAISHIFGATAALAAAASVPSVAFADGAKSLATQARARGIYGSRIAALKGAVDKGDSAAILEQQNAFRLFNSGVYS----TDKSKFAKAEELAKSVVSAASKGDAKALKDSYAEYMKYTEKKSGYDGAGDG--QGFGSEFDYKNRTPQ-GTVYQR 192
            S+ MS+E  SR   +  + GA  AL    S  S AFADGA SLAT ARARG+YG RIAAL  +V+KGD  A+  ++NAF LFNSGVY+     D+     A     S+  A SKGD   +K +YAE+MK  + + GY G      QG+ +E+D+K + P+ G++Y R
Sbjct:   41 SVVMSAEGESRRDML--VKGA-GALGVVFSGASAAFADGAVSLATVARARGLYGGRIAALSDSVNKGDLEAVEAEKNAFILFNSGVYARNGPVDRKNKKVAVAATNSLFDAVSKGDKAGVKSAYAEFMKVADIQPGYSGKDKDFTQGYSTEYDWKYKDPKKGSIYIR 204          
BLAST of mRNA_P-lacustris_contig930.15733.1 vs. uniprot
Match: A0A7S2FV99_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FV99_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 6.500e-21
Identity = 82/198 (41.41%), Postives = 116/198 (58.59%), Query Frame = 0
Query:    4 ACVALALLGSSSAFVVPMPNVRTCSSSSTSLAMSSEPMSRSQAISHIFGATAALAAAASVPSVAFADGAKSLATQARARGIYGSRIAALKGAVDKGDSAAILEQQNAFRLFNSGVYSTDKSKFAKAEELAK--SVVSAASKGDAKALKDSYAEYMK-------YTEKKSGYDGAGDGQGFGSEFDYKNRTPQGTVYQR 192
            A +AL L  S+SAF  P+ N      + +++ MS+E  SR   +  + GA  A+  A+S    A ADGA+S++T+ R++GIYG+RI AL  AV  GD AA+ EQ+NAF LF SG ++T   K    E  A   ++ +A S  D  ALK SYAE++K       Y EK   Y      QG+ +E+D+K  TP+GT+YQR
Sbjct:   24 ALIALCLAASASAFT-PVFN-----RAQSTVVMSAEQSSRRGFVQTV-GAFGAMVGASSA---ALADGAQSMSTRQRSKGIYGARIVALDQAVAAGDFAAVEEQKNAFVLFVSGGFTTPSGKVIAKELKADYANIFAAVSNKDQAALKSSYAEFVKKADIRPLYDEKTKAYT-----QGYSTEYDWKAYTPKGTIYQR 206          
BLAST of mRNA_P-lacustris_contig930.15733.1 vs. uniprot
Match: A0A1E7FAF2_9STRA (Extrinsic protein in photosystem II n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAF2_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 5.070e-18
Identity = 62/137 (45.26%), Postives = 88/137 (64.23%), Query Frame = 0
Query:   60 AASVPSVAFADGAKSLATQARARGIYGSRIAALKGAVDKGDSAAILEQQNAFRLFNSGVYSTDKSKFAKAEEL--AKSVVSAASKGDAKALKDSYAEYMKYTEKKSGYDG--AGDGQGFGSEFDYKNRTPQGTVYQR 192
            A ++P  A ADGA S AT  R++  +GSRIAALKGAV KGD AA+  ++NAF L+NSG Y   K+K AK + +    ++  A    DAKAL+ +YA Y+K T   S Y+   A +GQG+ S++DY+ +T Q  ++ R
Sbjct:   50 ATTMPGAAVADGAISKATIQRSKFKFGSRIAALKGAVAKGDFAAVAAEKNAFVLYNSGAYPGAKNKEAKKQAIIATNAIFGAIRAKDAKALQTAYAGYIKATNM-SDYEAISAEEGQGYSSDWDYRVKTNQAVLWVR 185          
BLAST of mRNA_P-lacustris_contig930.15733.1 vs. uniprot
Match: A0A448ZDN4_9STRA (PSII_Pbs31 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZDN4_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 4.210e-15
Identity = 58/128 (45.31%), Postives = 77/128 (60.16%), Query Frame = 0
Query:   69 ADGAKSLATQARARGIYGSRIAALKGAVDKGDSAAILEQQNAFRLFNSGVYSTDKSKFAKAEEL--AKSVVSAASKGDAKALKDSYAEYMKYTEKKSGYDG--AGDGQGFGSEFDYKNRTPQGTVYQR 192
            ADGA S AT  RA+  YGSRIAALK AV KGD  A+  ++NAF L+NSG +   K+K  KA  +    ++ +A    DA ALK +YA Y K  E  S Y    A  GQG+ S++DY+ +T Q  ++ R
Sbjct:   57 ADGAVSAATIQRAKFQYGSRIAALKDAVSKGDFGAVAAEKNAFILYNSGAFPGTKNKDKKAAAIQGTNAIFAAIRSKDAGALKTAYAAYTKTVEL-SDYAAISADQGQGYSSDYDYRVKTSQAAIWVR 183          
BLAST of mRNA_P-lacustris_contig930.15733.1 vs. uniprot
Match: A0A7S3PVM6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PVM6_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.100e-12
Identity = 61/155 (39.35%), Postives = 84/155 (54.19%), Query Frame = 0
Query:   41 MSRSQAISHIFGATAALAAAASVPSVAFADGAKSLATQARARGIYGSRIAALKGAVDKGDSAAILEQQNAFRLFNSGVYSTDKSKFAKAEELAKSVVSAASKGDAKALKDSYAEYMKYTEKKSGY---DGAGDGQGFGSEFDYKNRTPQGTVYQR 192
            M R  A   I  A A LA    VP++A AD A  +    RARG+YGSRIA L GAV  GD +AI  +++AF LFNSG Y  +K     A     ++ +A   GD  A+K +Y  Y+  T  K        + +GQG+ S+FD++ R+  G +Y R
Sbjct:   30 MDRRSAFGQIATAGAVLAG---VPAIASADVAAQIN---RARGLYGSRIANLAGAVAAGDYSAIAAEKSAFILFNSGAYPNNKPAQKNAVSQTNAIFAAIRSGDKAAVKSAYETYV--TTNKINILPTVDSNEGQGYCSDFDFRVRSSAGAIYVR 176          
BLAST of mRNA_P-lacustris_contig930.15733.1 vs. uniprot
Match: A0A7S2P618_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P618_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.990e-12
Identity = 47/113 (41.59%), Postives = 67/113 (59.29%), Query Frame = 0
Query:   83 GIYGSRIAALKGAVDKGDSAAILEQQNAFRLFNSGVYSTDKSKFAKAEELAKS--VVSAASKGDAKALKDSYAEYMKYTEKKSGYDGAG-DGQGFGSEFDYKNRTPQGTVYQR 192
            GIYG RIAALKGAV  GD  A+  ++NAF LFNSG Y   K+K  KA  +A +  + +A   GD  AL  +Y +Y+   +     + +  +GQG+  ++DYK R+  G +Y R
Sbjct:    1 GIYGDRIAALKGAVAAGDFGAVAAEKNAFILFNSGAYPGAKTKDKKAAAIASTNDIFAAIRAGDKAALSSAYTKYVADNDITGLPEVSNSNGQGYSGDYDYKARSSAGAIYVR 113          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig930.15733.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5JBE3_9PHAE1.710e-10087.50PSII_Pbs31 domain-containing protein n=2 Tax=Ectoc... [more]
B8CC14_THAPS2.390e-2444.39PSII_Pbs31 domain-containing protein n=1 Tax=Thala... [more]
B6ZHE7_9STRA6.230e-2248.12Extrinsic protein in photosystem II n=1 Tax=Chaeto... [more]
A0A7S2C001_9STRA7.690e-2242.13Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2S7V4_9STRA1.130e-2144.91Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2FV99_9STRA6.500e-2141.41Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1E7FAF2_9STRA5.070e-1845.26Extrinsic protein in photosystem II n=1 Tax=Fragil... [more]
A0A448ZDN4_9STRA4.210e-1545.31PSII_Pbs31 domain-containing protein n=1 Tax=Pseud... [more]
A0A7S3PVM6_9STRA1.100e-1239.35Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2P618_9STRA1.990e-1241.59Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.120.1740coord: 70..192
e-value: 2.8E-43
score: 149.2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..192
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.768
IPR040933Photosystem II Psb31 proteinPFAMPF18240PSII_Pbs31coord: 72..162
e-value: 1.8E-34
score: 118.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig930contigP-lacustris_contig930:30387..33861 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig930.15733.1mRNA_P-lacustris_contig930.15733.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig930 29243..33861 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig930.15733.1 ID=prot_P-lacustris_contig930.15733.1|Name=mRNA_P-lacustris_contig930.15733.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=193bp
MKTACVALALLGSSSAFVVPMPNVRTCSSSSTSLAMSSEPMSRSQAISHI
FGATAALAAAASVPSVAFADGAKSLATQARARGIYGSRIAALKGAVDKGD
SAAILEQQNAFRLFNSGVYSTDKSKFAKAEELAKSVVSAASKGDAKALKD
SYAEYMKYTEKKSGYDGAGDGQGFGSEFDYKNRTPQGTVYQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040933PSII_Pbs31