prot_P-lacustris_contig93.15712.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-lacustris_contig93.15712.1
Unique Name	prot_P-lacustris_contig93.15712.1
Type	polypeptide
Organism	Pleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length	122

Homology

[Close]

BLAST of mRNA_P-lacustris_contig93.15712.1 vs. uniprot
Match: D7G185_ECTSI (Rad60-SLD_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G185_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 5.850e-59
Identity = 89/111 (80.18%), Postives = 99/111 (89.19%), Query Frame = 0

Query:   10 AATTSWGGAGASGPAPLRLKFIFANHDGVVVELETDPTTLIKDLKVALVGKWPTAVEPVADLSHVRLICMGFGILPDTKSLTECRVPHFDAHPTPVNVAIRPRHIQVPQAG 120
            A  T+ G A  +G A LRLKFIFANHDGVVVE ET+PTTL+KDLKVAL+G+WPT VEPV DLSHVRL+CMGFGILPD KSLTECRVPHFDAHPTPVNVAIRP++IQVPQ+G
Sbjct:    5 AGATTLGTAAGAGGAALRLKFIFANHDGVVVEFETEPTTLVKDLKVALMGRWPTGVEPVQDLSHVRLVCMGFGILPDAKSLTECRVPHFDAHPTPVNVAIRPKNIQVPQSG 115

[Close]

BLAST of mRNA_P-lacustris_contig93.15712.1 vs. uniprot
Match: A0A6H5K5G8_9PHAE (Rad60-SLD_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5G8_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 5.590e-57
Identity = 88/108 (81.48%), Postives = 96/108 (88.89%), Query Frame = 0

Query:   10 AATTSWGGAGASGPAPLRLKFIFANHDGVVVELETDPTTLIKDLKVALVGKWPTAVEPVADLSHVRLICMGFGILPDTKSLTECRVPHFDAHPTPVNVAIRPRHIQVP 117
            A  T+ G A  +G A LRLKFIFANHDGVVVE ET+PTTL+KDLKVAL+G+WPT VEPV DLSHVRLICMGFGILPD KSLTECRVPHFDAHPTPVNVAIRP++IQVP
Sbjct:    5 AGATTLGTAAGAGGAALRLKFIFANHDGVVVEFETEPTTLVKDLKVALMGQWPTGVEPVQDLSHVRLICMGFGILPDAKSLTECRVPHFDAHPTPVNVAIRPKNIQVP 112

[Close]

BLAST of mRNA_P-lacustris_contig93.15712.1 vs. uniprot
Match: A0A024U2J5_9STRA (Rad60-SLD_2 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U2J5_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 4.020e-22
Identity = 41/87 (47.13%), Postives = 58/87 (66.67%), Query Frame = 0

Query:   25 PLRLKFIFANHDGVVVELETDPTTLIKDLKVALVGKWPTAVEPVADLSHVRLICMGFGILPDTKSLTECRVPHFDAHPTPVNVAIRP 111
            P++LKF+FAN +GV + L T     + ++K  L+  WP  +     ++ +RLICMG G+L DTK+L EC+VP F  HPTPVNV+I P
Sbjct:    3 PVQLKFLFANKEGVKITLATTRDQHVSEVKTQLLALWPPGLAKPEAITSIRLICMGLGVLQDTKTLVECKVPIFPGHPTPVNVSILP 89

[Close]

BLAST of mRNA_P-lacustris_contig93.15712.1 vs. uniprot
Match: W4G6F0_9STRA (Rad60-SLD_2 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G6F0_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 5.860e-22
Identity = 42/87 (48.28%), Postives = 57/87 (65.52%), Query Frame = 0

Query:   25 PLRLKFIFANHDGVVVELETDPTTLIKDLKVALVGKWPTAVEPVADLSHVRLICMGFGILPDTKSLTECRVPHFDAHPTPVNVAIRP 111
            P+ LKF+FAN +GV + L +     + D+K  L+  WP  +     L+ +RLICMG G+L DTK+L EC+VP F  HPTPVNV+I P
Sbjct:    3 PVTLKFLFANKEGVKITLASTRDKHVSDVKQQLLAVWPADLAKPESLTSIRLICMGLGVLQDTKTLVECKVPIFPGHPTPVNVSILP 89

[Close]

BLAST of mRNA_P-lacustris_contig93.15712.1 vs. uniprot
Match: A0A3F2RU18_9STRA (Rad60-SLD_2 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RU18_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.860e-21
Identity = 43/84 (51.19%), Postives = 54/84 (64.29%), Query Frame = 0

Query:   26 LRLKFIFANHDGVVVELETDPTTLIKDLKVALVGKWPTAVEPVADLSHVRLICMGFGILPDTKSLTECRVPHFDAHPTPVNVAI 109
            LRLKF+FANHDG  VEL     T ++ +K  L+  WP  V P  +   VRLICMG GIL D+ +L    VP F+ HPTPVNV++
Sbjct:    9 LRLKFLFANHDGAHVELMFPKATTVEKVKAQLMQSWPQTVPPAENAKAVRLICMGRGILQDSHTLVSAGVPAFETHPTPVNVSV 92

[Close]

BLAST of mRNA_P-lacustris_contig93.15712.1 vs. uniprot
Match: A0A6A4Z850_9STRA (Rad60-SLD_2 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z850_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 2.340e-21
Identity = 42/87 (48.28%), Postives = 57/87 (65.52%), Query Frame = 0

Query:   25 PLRLKFIFANHDGVVVELETDPTTLIKDLKVALVGKWPTAVEPVADLSHVRLICMGFGILPDTKSLTECRVPHFDAHPTPVNVAIRP 111
            P+ LKF+FAN +GV + L +     + D+K  L+  WP  +     L+ +RLICMG G+L DTK+L EC+VP F  HPTPVNV+I P
Sbjct:    3 PVTLKFLFANKEGVKITLASTRDKHVSDVKQQLLAVWPADLAKPESLTSIRLICMGLGVLQDTKTLVECKVPIFPGHPTPVNVSILP 89

[Close]

BLAST of mRNA_P-lacustris_contig93.15712.1 vs. uniprot
Match: A0A836CPK7_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPK7_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 3.630e-21
Identity = 44/88 (50.00%), Postives = 60/88 (68.18%), Query Frame = 0

Query:   26 LRLKFIFANHDGVVVELETDPTTLIKDLKVALVGKWPTAVEPVADLSHVRLICMGFGILPDTKSLTECRVPHFDAHPTPVNVAIRPRH 113
            L LKF+FAN + +VV L  +    +  LK AL+  WP  V P A+ + +RLICMG G+  D K+L E ++P FDA+PTP+NVAIRP+H
Sbjct:    2 LSLKFLFANAESLVVVLRFEKDETVGGLKEALLKSWPADVPP-AETAQIRLICMGRGLTDDAKTLEELQLPTFDAYPTPINVAIRPKH 88

[Close]

BLAST of mRNA_P-lacustris_contig93.15712.1 vs. uniprot
Match: G4YNG2_PHYSP (Rad60-SLD_2 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YNG2_PHYSP)

HSP 1 Score: 90.9 bits (224), Expect = 3.930e-21
Identity = 49/94 (52.13%), Postives = 58/94 (61.70%), Query Frame = 0

Query:   16 GGAGASGPAPLRLKFIFANHDGVVVELETDPTTLIKDLKVALVGKWPTAVEPVADLSHVRLICMGFGILPDTKSLTECRVPHFDAHPTPVNVAI 109
            G  G S  A LRLKF+FAN DGV VE+     T +  +K  L+  WP  V P  D   VRLICMG GIL D+ +L E  VP FD HPTPVNV++
Sbjct:    2 GSKGGSTAAELRLKFLFANQDGVRVEMGFPRATTVAQVKEQLMRSWPQNVPPAEDAKSVRLICMGRGILQDSHTL-ESAVPAFDTHPTPVNVSV 94

[Close]

BLAST of mRNA_P-lacustris_contig93.15712.1 vs. uniprot
Match: A0A485KRJ7_9STRA (Aste57867_10885 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KRJ7_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 8.400e-21
Identity = 41/87 (47.13%), Postives = 57/87 (65.52%), Query Frame = 0

Query:   25 PLRLKFIFANHDGVVVELETDPTTLIKDLKVALVGKWPTAVEPVADLSHVRLICMGFGILPDTKSLTECRVPHFDAHPTPVNVAIRP 111
            P+ LKF+FAN +GV + L +     + D+K  L+  WP  +     L+ +RLICMG G+L DTK+L E +VP F  HPTPVNV+I+P
Sbjct:   66 PITLKFLFANKEGVKITLSSSRDKHVSDIKHQLLDVWPAGLPKPESLTSIRLICMGLGVLQDTKTLAESKVPVFPGHPTPVNVSIQP 152

[Close]

BLAST of mRNA_P-lacustris_contig93.15712.1 vs. uniprot
Match: H3GTH8_PHYRM (Rad60-SLD_2 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTH8_PHYRM)

HSP 1 Score: 88.6 bits (218), Expect = 3.260e-20
Identity = 42/84 (50.00%), Postives = 52/84 (61.90%), Query Frame = 0

Query:   26 LRLKFIFANHDGVVVELETDPTTLIKDLKVALVGKWPTAVEPVADLSHVRLICMGFGILPDTKSLTECRVPHFDAHPTPVNVAI 109
            LRL+F+FAN DGV VE+       +  +K  L+  WP  V P  D   VRLICMG GIL D+ +L    VP FD HPTPVNV++
Sbjct:   12 LRLRFLFANQDGVHVEMGFPKEATVAQVKAQLMHSWPQNVPPAEDAKSVRLICMGRGILQDSHTLVSAGVPAFDTHPTPVNVSV 95

The following BLAST results are available for this feature:

BLAST of mRNA_P-lacustris_contig93.15712.1 vs. uniprot

BLAST of mRNA_P-lacustris_contig93.15712.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G185_ECTSI	5.850e-59	80.18	Rad60-SLD_2 domain-containing protein n=1 Tax=Ecto...	[more]
A0A6H5K5G8_9PHAE	5.590e-57	81.48	Rad60-SLD_2 domain-containing protein n=1 Tax=Ecto...	[more]
A0A024U2J5_9STRA	4.020e-22	47.13	Rad60-SLD_2 domain-containing protein n=1 Tax=Apha...	[more]
W4G6F0_9STRA	5.860e-22	48.28	Rad60-SLD_2 domain-containing protein n=1 Tax=Apha...	[more]
A0A3F2RU18_9STRA	1.860e-21	51.19	Rad60-SLD_2 domain-containing protein n=3 Tax=Phyt...	[more]
A0A6A4Z850_9STRA	2.340e-21	48.28	Rad60-SLD_2 domain-containing protein n=1 Tax=Apha...	[more]
A0A836CPK7_9STRA	3.630e-21	50.00	Ubiquitin-like domain-containing protein n=1 Tax=T...	[more]
G4YNG2_PHYSP	3.930e-21	52.13	Rad60-SLD_2 domain-containing protein n=4 Tax=Phyt...	[more]
A0A485KRJ7_9STRA	8.400e-21	47.13	Aste57867_10885 protein n=1 Tax=Aphanomyces stella...	[more]
H3GTH8_PHYRM	3.260e-20	50.00	Rad60-SLD_2 domain-containing protein n=1 Tax=Phyt...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039540	UBL3-like, ubiquitin domain	PFAM	PF13881	Rad60-SLD_2	coord: 26..104 e-value: 9.1E-12 score: 45.1
None	No IPR available	GENE3D	3.10.20.90		coord: 19..115 e-value: 2.9E-12 score: 48.3
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 33..109

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-lacustris_contig93	contig	P-lacustris_contig93:68244..72270 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_93	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-lacustris_contig93.15712.1	mRNA_P-lacustris_contig93.15712.1	Pleurocladia lacustris SAG_25_93	mRNA	P-lacustris_contig93 68244..72270 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-lacustris_contig93.15712.1 ID=prot_P-lacustris_contig93.15712.1|Name=mRNA_P-lacustris_contig93.15712.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=122bp
MATSQASASAATTSWGGAGASGPAPLRLKFIFANHDGVVVELETDPTTLI
KDLKVALVGKWPTAVEPVADLSHVRLICMGFGILPDTKSLTECRVPHFDA
HPTPVNVAIRPRHIQVPQAGV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR039540	UBL3-like_ubiquitin_dom
IPR029071	Ubiquitin-like_domsf