prot_P-lacustris_contig929.15707.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig929.15707.1
Unique Nameprot_P-lacustris_contig929.15707.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length429
Homology
BLAST of mRNA_P-lacustris_contig929.15707.1 vs. uniprot
Match: A0A6H5KCA8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCA8_9PHAE)

HSP 1 Score: 355 bits (910), Expect = 5.780e-116
Identity = 187/400 (46.75%), Postives = 252/400 (63.00%), Query Frame = 0
Query:   21 VISSLCVLLLSKAHGFFASVDFGWARGATGGSQQRQYQREDFSKRTSLGPRPPANERERRWAELPEYDPEEHLLYFVHILKTSGTSFSFVLHDIFGEKDVVPTSHASGYLDVKKLQGHNATWWAPYKVMYGHNGCGIIDALEIPPSKKMKLLLVVRNPLLHKASVYSETICRFGRHIHD-GVIDMEEATLARIDETPGRSAAQYTFCRDPELWVESSNFANSWRDIESRTYAYEGGEAHRCIR-----HRSWVSESAVGKGETPRGKEGCNSLKAMGHHTAILEEYYDRLADSAIRRMEDALWVGVTERSDEADCLLFLMLGKGSTDMGSSRHKEPRPITVWSQDAMSKATRYDQADWKLFNAANDMLDLRIWTARERLKNAGPEEREILGTHCVNVLNG 414
            V++ LC+  +     ++ SVD GW    + G+            R++   R PAN+ +RRW+E+P Y P + L++F HI KT GTS   +L ++F    +VPTSH S  L V  LQGH++ WW P+++M+ HN   + D + IPP+K  ++L+ +RNPLLHKAS++ E++CRFG+HI D G ID E ATLAR++   G    QY FCRDPE+WV S  F   +R+ E+R  +Y   E H CIR     +R  V ++ VG          C ++KA G    +   Y++R AD+AIRRME ALWVGVTER +E+ CLLFL LGK  ++M   R K PRPITVW + A  KA  YD+ADW++F AAND LDLR+WTARERLK+AG EER  LG HC  VL G
Sbjct:   45 VVAGLCLHRVI----WWTSVDSGWEEEQSLGTSYADSLETAGLNRSA---RAPANDVDRRWSEIPLYRPGQDLVFFSHIHKTGGTS---LLANVFPRTALVPTSHPSKGLRVNHLQGHDSEWWKPFQLMFSHNRANVTDTIGIPPTKTPRVLITIRNPLLHKASIFFESVCRFGQHISDNGTIDQEAATLARVNGK-GVETEQYNFCRDPEMWVGSKQFDKVYRNFEARWLSYGAAEGHPCIRPDPEFNRWRVDDTDVGG--------TCKAIKASGQDADVWAAYFERTADAAIRRMEGALWVGVTERMEESLCLLFLTLGKKESEMPQHRLKTPRPITVWHEKAKEKAASYDRADWRVFEAANDFLDLRLWTARERLKSAGEEERARLGDHCFQVLAG 425          
BLAST of mRNA_P-lacustris_contig929.15707.1 vs. uniprot
Match: D8LDK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDK9_ECTSI)

HSP 1 Score: 321 bits (823), Expect = 6.600e-105
Identity = 174/357 (48.74%), Postives = 203/357 (56.86%), Query Frame = 0
Query:   67 SLGPRPPAN---------ERERRWAELPEYDPEEHLLYFVHILKTSGTSFSFVLHDIFGEKDVVPTSHASGYLDVKKLQGHNATWWAPYKVMYGHNGCGIIDALEIPPSKKMKLLLVVRNPLLHKASVYSETICRFGRHIHDGVIDMEEATLARIDETPGRSAAQYTFCRDPELWVESSNFANSWRDIESRTYAYEGGEAHRCIRHRSWVSESAVGKGETPRGKEGCNSLKAMGHHTAILEEYYDRLADSAIRRMEDALWVGVTERSDEADCLLFLMLGKGSTDMGSSRHKEPRPITVWSQDAMSKATRYDQADWKLFNAANDMLDLRIWTARERLKNAGPEEREILGTHCVNVLNG 414
            S GPRPP+N         +RER+WAELPEY P+EHLL+F HI+KTSGTS SFVL DIFGE+ VVPTSH SGY+ + ++QGH+  WWAPY                                                                                                   E+ TYA+   + HRC+   +WV      KG     +E CNSLKA G H AILEEYYDR+A+SAI+R+ D LWVGVTERSDEADCLLFL LGKGST MGS RHKEPRPI+VW + AMSK T+YDQADWK+FNAAND+LDLRIWTARERLK+AG EE E LG HCVNV+NG
Sbjct:   32 SRGPRPPSNHLGLRWFKQDRERKWAELPEYHPDEHLLFFAHIIKTSGTSLSFVLRDIFGEEAVVPTSHESGYMKLGEVQGHDDNWWAPY---------------------------------------------------------------------------------------------------EAVTYAHNEEDKHRCVYGHAWVKPE---KGGDHHDEESCNSLKASGKHNAILEEYYDRMAESAIKRLGDGLWVGVTERSDEADCLLFLTLGKGSTGMGSYRHKEPRPISVWHEAAMSKVTQYDQADWKVFNAANDILDLRIWTARERLKHAGEEELERLGKHCVNVING 286          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig929.15707.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KCA8_9PHAE5.780e-11646.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LDK9_ECTSI6.600e-10548.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..428
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 31..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..30
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig929contigP-lacustris_contig929:65518..72689 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig929.15707.1mRNA_P-lacustris_contig929.15707.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig929 65367..73646 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig929.15707.1 ID=prot_P-lacustris_contig929.15707.1|Name=mRNA_P-lacustris_contig929.15707.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=429bp
MLDSPAPPVPKKRAVGILLLVISSLCVLLLSKAHGFFASVDFGWARGATG
GSQQRQYQREDFSKRTSLGPRPPANERERRWAELPEYDPEEHLLYFVHIL
KTSGTSFSFVLHDIFGEKDVVPTSHASGYLDVKKLQGHNATWWAPYKVMY
GHNGCGIIDALEIPPSKKMKLLLVVRNPLLHKASVYSETICRFGRHIHDG
VIDMEEATLARIDETPGRSAAQYTFCRDPELWVESSNFANSWRDIESRTY
AYEGGEAHRCIRHRSWVSESAVGKGETPRGKEGCNSLKAMGHHTAILEEY
YDRLADSAIRRMEDALWVGVTERSDEADCLLFLMLGKGSTDMGSSRHKEP
RPITVWSQDAMSKATRYDQADWKLFNAANDMLDLRIWTARERLKNAGPEE
REILGTHCVNVLNGLGVQNSSDSGGVNP*
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