prot_P-lacustris_contig928.15700.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig928.15700.1
Unique Nameprot_P-lacustris_contig928.15700.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length92
Homology
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BLAST of mRNA_P-lacustris_contig928.15700.1 vs. uniprot
Match: D7G1Z1_ECTSI (C2H2 and CCCH zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Z1_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 7.700e-34
Identity = 59/80 (73.75%), Postives = 66/80 (82.50%), Query Frame = 0 
Query:    1 MADACRPDPGGLYLGPVRRPLNSDSEFFDDGNTNRALLCKINVFAIITGGAECMDFHEHQQQTFECMFKGCNATFSSLKR 80
            M DA R   GGLYLGPV RPL+SDSEFFD+GNTNRALLCK+NVFAI++ GA+ MD HE Q Q FECMF+ C ATFSSLKR
Sbjct:    1 MVDADRRSTGGLYLGPVLRPLSSDSEFFDEGNTNRALLCKLNVFAIMSEGADAMDLHEDQHQ-FECMFQDCTATFSSLKR 79
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig928.15700.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1Z1_ECTSI7.700e-3473.75C2H2 and CCCH zinc finger protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig928contigP-lacustris_contig928:32635..33335 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig928.15700.1mRNA_P-lacustris_contig928.15700.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig928 32635..33551 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig928.15700.1 ID=prot_P-lacustris_contig928.15700.1|Name=mRNA_P-lacustris_contig928.15700.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=92bp
MADACRPDPGGLYLGPVRRPLNSDSEFFDDGNTNRALLCKINVFAIITGG
AECMDFHEHQQQTFECMFKGCNATFSSLKRPTAGLRSIDFHA
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