prot_P-lacustris_contig925.15681.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig925.15681.1
Unique Nameprot_P-lacustris_contig925.15681.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length330
Homology
BLAST of mRNA_P-lacustris_contig925.15681.1 vs. uniprot
Match: D7G2W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2W5_ECTSI)

HSP 1 Score: 300 bits (768), Expect = 2.480e-94
Identity = 185/300 (61.67%), Postives = 216/300 (72.00%), Query Frame = 0
Query:   43 GGLLLPEARAAVAQAKFEAEHVQIFADSRSRLELFLARGGLRENAGGRTNFDVDF-AASSASDEFGGIADVASSDSSL------SRETVPDLKADGTTALREGGGGGVALPSQACVEDAADDVDGGMVSQATNWFLGSMDFLVAWAHYLSSVSMPWGGGVGEISCVSAIYLAMLVRILVAAVFAAVRVVLGLPAFPPYPSSASSSTKPGMGMVFNMILAAVPTLGKLLAWGNILKSIFADTNLVVAGTVLTLALCLALEDGAGPSRLAGSISGALGLF-PSFHPSE-----AGGGGLKEL 329
            GGLLLPEARAAVAQAKFEAEH+Q FADSRSRLELFLA  G  E   GR   D  F A S+A+DEFG + D  SS S        + ++  D K DG   + EG G    L +    E+  D    GM+S+AT+WFL  +D +V WAHYLS+VSMPWGGGVGEISCVSAIYLA+ VR++VA  F+ VRV+LGLPAFP    +A+ ++KPGM  V  M+LA VPTLGK+LAWGN++KSIF+DTNLVVAGTVLTLAL LA E+GAGP RLAGSISGALGLF PSF  SE      GGG LKEL
Sbjct:  286 GGLLLPEARAAVAQAKFEAEHMQGFADSRSRLELFLAGDGGSE---GRNALDEGFDAGSTAADEFGDVGDAYSSSSGSFESAENTEDSEEDAKVDG---VAEGRGDEAVLAATMGEEEGGDVGHDGMLSEATDWFLNFVDMVVGWAHYLSAVSMPWGGGVGEISCVSAIYLAIFVRLVVAVAFSGVRVMLGLPAFP----AANPTSKPGM--VMGMVLATVPTLGKVLAWGNVVKSIFSDTNLVVAGTVLTLALNLAFEEGAGPRRLAGSISGALGLFSPSFQGSEEGDYSGGGGDLKEL 573          
BLAST of mRNA_P-lacustris_contig925.15681.1 vs. uniprot
Match: A0A6H5JKL1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKL1_9PHAE)

HSP 1 Score: 286 bits (733), Expect = 5.080e-92
Identity = 181/306 (59.15%), Postives = 210/306 (68.63%), Query Frame = 0
Query:   43 GGLLLPEARAAVAQAKFEAEHVQIFADSRSRLELFLARGGLRENAGGRTNFDVDF-AASSASDEFGGIADVASSDSSLSRETVP----------DLKADGTTALREGGGGGVALPSQACVEDAADDVDGGMVSQATNWFLGSMDFLVAWAHYLSSVSMPWGGGVGEISCVSAIYLAMLVRILVAAVFAAVRVVLGLPAFPPYPSSASSSTKPGMGMVFNMILAAVPTLGKLLAWGNILKSIFADTNLVVAGTVLTLALCLALEDGAGPSRLAGSISGALGLF-PSFHPSE-------AGGGGLKEL 329
            GGLLLPEARAAVAQAKFEA+H+Q FADSRSRLE FLA  G+ E   GR   DV F A S+A+DEFG + D                        D K D     R   G    L +    E+A DD   G++S+AT+WFL  +D +V WAHYLS+VSMPW GGVGEISCVSAI+LA+ VR++VA  F+ VRVVLGLPAFP    +A S++KPGM  V  M+LA VPTLGK+LAWGN++KSIF+DTNLVVAGTVLTLAL LA E+GAGP RLAGSISGALGLF PSF  SE        GGGGLKEL
Sbjct:   50 GGLLLPEARAAVAQAKFEADHMQGFADSRSRLEFFLAGDGVSE---GRKALDVGFDAGSTAADEFGDVVDXXXXXXXXXXXXXXXXXXXXXXEEDAKVDDVAERR---GDEAVLAATMGEEEAGDD---GLLSEATDWFLNFVDLVVGWAHYLSAVSMPWRGGVGEISCVSAIHLALFVRLVVAVAFSGVRVVLGLPAFP----AAQSTSKPGM--VMGMVLATVPTLGKVLAWGNVVKSIFSDTNLVVAGTVLTLALNLAFEEGAGPRRLAGSISGALGLFSPSFQGSEEGDYSTGGGGGGLKEL 340          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig925.15681.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2W5_ECTSI2.480e-9461.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKL1_9PHAE5.080e-9259.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 166..183
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 294..329
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 226..245
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 184..202
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 267..271
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 246..266
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 272..293
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 203..225
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..165
NoneNo IPR availableTMHMMTMhelixcoord: 209..231
NoneNo IPR availableTMHMMTMhelixcoord: 246..268

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig925contigP-lacustris_contig925:25398..43829 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig925.15681.1mRNA_P-lacustris_contig925.15681.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig925 24546..47504 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig925.15681.1 ID=prot_P-lacustris_contig925.15681.1|Name=mRNA_P-lacustris_contig925.15681.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=330bp
MDRKGHRRPRPRPQTPARRRAVLDWAGGGNEDGVAAAGWGRGGGLLLPEA
RAAVAQAKFEAEHVQIFADSRSRLELFLARGGLRENAGGRTNFDVDFAAS
SASDEFGGIADVASSDSSLSRETVPDLKADGTTALREGGGGGVALPSQAC
VEDAADDVDGGMVSQATNWFLGSMDFLVAWAHYLSSVSMPWGGGVGEISC
VSAIYLAMLVRILVAAVFAAVRVVLGLPAFPPYPSSASSSTKPGMGMVFN
MILAAVPTLGKLLAWGNILKSIFADTNLVVAGTVLTLALCLALEDGAGPS
RLAGSISGALGLFPSFHPSEAGGGGLKEL*
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