prot_P-lacustris_contig925.15680.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig925.15680.1
Unique Nameprot_P-lacustris_contig925.15680.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length492
Homology
BLAST of mRNA_P-lacustris_contig925.15680.1 vs. uniprot
Match: A0A6H5JN30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN30_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 3.580e-40
Identity = 216/527 (40.99%), Postives = 251/527 (47.63%), Query Frame = 0
Query:    2 LSPQSGGGDGSTQKKMRPSVDGGERSFGGNIGGGVIQQQ--------VSRSSSSERRLVHTVADADADIAWSRGVAASGTPPPDEVKGV--DVLARELAESERELLSSRVAVDLAKARYEEASRTHDAKREQVRAAXXXXXXXXXXXXXXXXXXXXXRNDEL--------------HSLARSFEATAGASSLANRAMSGGRDAGGGGRARVADGSGVVNSGVSGDRPSCDVAAIRRASPPPCRSS---SMRTSRSAEDVRLPSPSNDVL----ALPKDR-SSSCSPSASASEATVRADEMREVELEAALLYGIGRTPVASGRIIPTSGSPSAAXXXXXXXXXXXXXXXXXXKIVSLXXXXXSSPTSVGHKAFDAARXXXXXXXXXXXXXXXXXXXXXXRAPHSPLAPPAWKSGHLSMTHQAERAAAGTAGRHHHIPRSAVGQMPDSPLVSGETDSDHSSDSMGCTAVDDSSMAISQQQHQLRPPLW----GWSWSGR-NWGEYRGRGRGGDDRHAPPLAKLTADVLV 491
             S  +GGGD    K+ R SVD G+  FGG     V+QQ         V   S+S  RL H   +A    +W+RG +  G PPP     V  DVLAREL ESERELLSSRVAVDLA+ARYEEASRTH AKREQV   XXXXXXXXXXXXXXXXXXXXX                   HSLARS E  A  S+   RA +G   AG G     A   G  +    G     D A   R S P  R S   S R+ R +E     SPS + L    A P  + SSS SPSA+       ADEM EV+LEAALL G+GR PV+S R+    GS +A                   +IVSL     +                                       HSPL    WK  H                      RSA+GQ P SP   GETDSDHSSD  GC AV+D + +  QQ H+L+ P+     G   +GR +W +Y   G GG DR A PLAK TADVLV
Sbjct:  593 FSSLAGGGD-PAAKRRRSSVDEGDLPFGG-----VMQQXXXXXXXXXVRGRSTSNERLPHGNGNA---ASWTRGASGLGMPPPPATALVRDDVLARELEESERELLSSRVAVDLAQARYEEASRTHHAKREQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATLKGGASRHSLARSSEVAAETSAPNARATAG---AGTGDSRHSAANDGRGSGSEEGRNGDADAAFHHRNSLPLGRRSPAASGRSERPSESYGR-SPSLEALGAGPASPVGKVSSSPSPSAAGQAQPDCADEMMEVKLEAALLCGMGRAPVSSRRL----GSAAAGAAVTPSPKAVTAGAEKGLEIVSLA----AXXXXXXXXXXXXXDGNVGVPPRSSSSSPGGIRRDLSERTHSPLPSLPWKGHHNXXXXXXXX-------------RSAMGQAPGSPSACGETDSDHSSD-RGCAAVEDLAWSKKQQHHELQGPVVPRAVGRGGAGRLSWADY---GDGGGDRRALPLAKRTADVLV 1081          
BLAST of mRNA_P-lacustris_contig925.15680.1 vs. uniprot
Match: D7G2W4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2W4_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 1.510e-33
Identity = 204/500 (40.80%), Postives = 234/500 (46.80%), Query Frame = 0
Query:    8 GGDGSTQKKMRPSVDGGERSFGGNIGGGVIQQQVSRSSSSERRLVHTVADADADIAWSRGVAASGTPPPDEVKGV--DVLARELAESERELLSSRVAVDLAKARYEEASRTHDAKREQVRAAXXXXXXXXXXXXXXXXXXXXXRND--------ELHSLARSFEATAGASSLANRAMSGGRDAGGGGRARVADGSGVVNS-GVSGDRPSCDVAAIRRASPPPCRSSSMRTSRSAEDVRLPSPSNDVLALPKDRSSSCSPSASASEATVRADEMREVELEAALLYGIGRTPVASGRIIPTSGSPSAAXXXXXXXXXXXXXXXXXXKIVSLXXXXXSSPTSVGHKAFDAARXXXXXXXXXXXXXXXXXXXXXXRAPHSPLAPPAWKSGHLSMTHQAERAAAGTAGRHHHIPRSAVGQMPDSPLVSGETDSDHSSDSMGCTAVDDSSMAISQQQHQLRPPLW----GWSWSGR-NWGEYRGRGRGGDDRHAPPLAKLTADVLV 491
            GGDG   K+ RPSVDGG+R  GG I        V   S+S  RL H    A    +W  G + SGTP P     V  DVLARE  ESERELLSSRVAVDLA+AR+EEASRTH AKREQV   XXXXXXXXXXXXXXXXXXXXX            +HS ARS E  A  S+   RA + G   G              NS   +      D A + R SP                                                 ADEM EV+LEAALL G+GR PV+S ++     S +A                   +IVSL XXXX               XXXXXXXXXXX              HSPL    WK GH                      RSA+GQ P SP   GETDSDHSSD  GC A++D + +  QQ H+L+ P+     G   +GR +W +Y   G  G DR APPLAKLTADVLV
Sbjct:  352 GGDGPATKRRRPSVDGGDRPLGGVIQQXXXXXXVRGRSTSNERLTHGNGSA---ASWPSGASGSGTPLPPAAALVYDDVLAREFEESERELLSSRVAVDLAQARFEEASRTHHAKREQVLXXXXXXXXXXXXXXXXXXXXXXXXXXTPTLKGGASVHSPARSSEVAAETSAPTGRAAAAGGRHGXXXXXXXXXXXXXHNSDSTAAFHHRRDSAPLGRRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDCADEMMEVKLEAALLCGMGRAPVSSRQLA----SAAAGAAVTPSPKAVSAGAEKGLEIVSLAXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXRGGIRRDLSERT--HSPLPSLPWKGGHNHXXXX-------XXXXXXXXXRSAMGQAPGSPSACGETDSDHSSD-RGCAAIEDLAGSKKQQHHELQRPVVPRAVGRGGAGRLSWTDY---GDAGGDRRAPPLAKLTADVLV 831          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig925.15680.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JN30_9PHAE3.580e-4040.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2W4_ECTSI1.510e-3340.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 103..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig925contigP-lacustris_contig925:11049..13837 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig925.15680.1mRNA_P-lacustris_contig925.15680.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig925 11049..23284 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig925.15680.1 ID=prot_P-lacustris_contig925.15680.1|Name=mRNA_P-lacustris_contig925.15680.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=492bp
MLSPQSGGGDGSTQKKMRPSVDGGERSFGGNIGGGVIQQQVSRSSSSERR
LVHTVADADADIAWSRGVAASGTPPPDEVKGVDVLARELAESERELLSSR
VAVDLAKARYEEASRTHDAKREQVRAAAAATAAAAAAAEQQQQQQRRQRN
DELHSLARSFEATAGASSLANRAMSGGRDAGGGGRARVADGSGVVNSGVS
GDRPSCDVAAIRRASPPPCRSSSMRTSRSAEDVRLPSPSNDVLALPKDRS
SSCSPSASASEATVRADEMREVELEAALLYGIGRTPVASGRIIPTSGSPS
AAATAPPPSDAGAAGAGKGLKIVSLAAAAASSPTSVGHKAFDAARRSSSS
SPDAIRRGGGGCSGGGGRAPHSPLAPPAWKSGHLSMTHQAERAAAGTAGR
HHHIPRSAVGQMPDSPLVSGETDSDHSSDSMGCTAVDDSSMAISQQQHQL
RPPLWGWSWSGRNWGEYRGRGRGGDDRHAPPLAKLTADVLV*
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