prot_P-lacustris_contig924.15676.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig924.15676.1
Unique Nameprot_P-lacustris_contig924.15676.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length595
Homology
BLAST of mRNA_P-lacustris_contig924.15676.1 vs. uniprot
Match: A0A6H5L0S8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S8_9PHAE)

HSP 1 Score: 292 bits (748), Expect = 1.230e-82
Identity = 254/575 (44.17%), Postives = 308/575 (53.57%), Query Frame = 0
Query:   14 ESEAWDSDDNDDNGQGVDSPDE-PSNNAGGNVGG--------NAIRGGGNELEHSRESAAECFTDSSSEFCFYGNLNQSSPKRPIEEGSDWDGS-ASQSGDDVENETGRRLPLS-ANSDLQWSKVAAGDRRGGDSPSPRLSPSITQE----------RYRQTSPSSRR----------------------------LSTQSGVPVIEAVSVTQG-DTIQRSREDCKPNQTQIRGAD-EAETQKMFPSITTGP-AGAEEAGILHVLRAELSDLREYILRSERKQEAQLRDLGTRLEAQERRSGPSATDTDRKGAAPHTVPGEGEIATAQASFAIDEAAEAGTCQGNGGSRGGTPHGAAVRNPFAGTGGGAATTPRDHFPAFEDALLDRGDADENGTTPRGTGGEEGGCRKEGGEREGSRSDIHNDPFDFSIDTLSHINNHTDFGTDAPRTAGLPVAAAATSPNFGRDGKGVKGQRGKTRPRWVMAGPSEADAGEHLKRGRGGEEDEVFDAKDTAAEEAFFSDACATASLQTPVKHMLASAVSDLGVAVRRGKR-------DAKTITPARRKLHARS 529
            ESEAWDS+++D  GQGV SP   P+++ GG + G        +AI G     E SR+  +     S +E    G+L  SSPKRP EE SDWDG  A +S +D  ++  R+L  S    +L WSKV A       SPSP LSPS +            R    +P                                LSTQS     E + V +G  T++R+R     +    RG D E  TQ  F +  TG  AG  +A  +  LRAELS LRE++LRSE+K+EAQLR+LGTRL  QERRSGP  + +            EG  A   A+  + EA E  T +  GG R  TP GA VRNPFAGTGGGAATTPRDHFPAFEDALLD G+++    TP G+G EEGG R + GE EGS+S I+N+ FDFSIDTLSHINNHTDFGTDAP T     A AA SP  GR      G  G+ R  WV  G + +                         EEAFFSDACATASL+TPVKHMLA+A  DLGVAVRRG+R        +    P RRK  A S
Sbjct:   92 ESEAWDSEEDD--GQGVASPGRAPNSSHGGALAGVTGGTGRFSAIGGSRVAREESRKKPSSSSESSPAEL--EGDL--SSPKRPAEESSDWDGGEAGRSSNDDVSDPRRQLAASDCCEELPWSKVNAERENDDSSPSPGLSPSPSARPTDSELGVGGRSSAAAPIGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSTQSDDQAEEPIGVARGGSTLRRTR----AHDRSARGTDDETGTQVTFQASGTGAEAGGGDAATIRALRAELSTLREHVLRSEQKREAQLRELGTRLAVQERRSGPERSGSTTSTTLREEGEREGVTAIGTAALVVGEAVE--TARDKGGCRD-TPTGAVVRNPFAGTGGGAATTPRDHFPAFEDALLDPGESE---GTPGGSGDEEGGVRCQRGE-EGSKSAINNEAFDFSIDTLSHINNHTDFGTDAPLTPAPRSATAAASPKIGR------GAAGQARLPWVKGGETSSAQDAGXXXXXXXXXXXXXXXXXXXXEEAFFSDACATASLKTPVKHMLATAAPDLGVAVRRGRRPDTGKAASSAATAPTRRKPTAPS 643          
BLAST of mRNA_P-lacustris_contig924.15676.1 vs. uniprot
Match: D8LQ68_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ68_ECTSI)

HSP 1 Score: 274 bits (700), Expect = 4.030e-76
Identity = 233/515 (45.24%), Postives = 269/515 (52.23%), Query Frame = 0
Query:   83 SSPKRPIEEGSDWDGSASQSGDDVENETGRRLPLSANS---DLQWSKVAAGDRRGGD--SPSPRLSPSITQERYRQTSPSSR-------------------------------------------------RLSTQSGVPVIEAVSVTQGDTIQRSREDCKPNQTQIRGAD-EAETQKMFPSITTGP-AGAEEAGILHVLRAELSDLREYILRSERKQEAQLRDLGTRLEAQERRSGPSATDTDRKGAAPHTV---PGEGEIATA--QASFAIDEAAEAGTCQGNGGSRGGTPHGAAVRNPFAGTGGGAATTPRDHFPAFEDALLDRGDADENGTTPRGTGGEEGGCRKEGGEREGSRSDIHNDPFDFSIDTLSHINNHTDFGTDAPRTAGLPVAAAATSPNFGRDGKGVKGQRGKTRPRWVMAGPSEADAGEHLKRGRGGEEDEVFDAKDTAAEEAFFSDACATASLQTPVKHMLASAVSDLGVAVRRGKR-------DAKTITPARRKLHARS 529
            SSPKRP EE SDWDG  +          G R  L+A+    +L WS V     RG D  SPSP LSPS          PS+R                                                  LSTQS     E + V +GD+  R     + +     G D EA  Q  F +  TG  AG E+A  +  LRAELS LRE++LRSE+K+EAQLR+LGTRL  QERRSGP     +R G+A  T     GE E   A   A+  + EA E G  +  GG R  TP GA VRNPFAGTGGGAATTPRDHFPAFEDALLD G+++    TP G+G E GG R + GE EGS+S I+N+ FDFSIDTLSHINNHTDFGTDAP T  LP AAAATSP  GR      G  G+ R  WV  G                             EEAFFSDACATASL+TPVKHML +A SDLGVAVRRG+R        +    P RRK  A S
Sbjct:  188 SSPKRPAEESSDWDGEEA-GRSXXXXXXGPRRQLAASDCCEELPWSNV--NPERGNDDSSPSPGLSPS----------PSARPTDSELGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSTQSDDQAEEPIGVARGDSTPRR---SRAHDRSAHGTDDEAGAQVTFQASETGAEAGGEDAATIRALRAELSTLREHVLRSEQKREAQLRELGTRLAVQERRSGP-----ERSGSATSTALREEGEREAVAAIGTAALVVGEAVETG--RDKGGCRD-TPRGAVVRNPFAGTGGGAATTPRDHFPAFEDALLDPGESE---ATPGGSGDEGGGVRGQRGE-EGSKSAINNEAFDFSIDTLSHINNHTDFGTDAPLTPALPSAAAATSPKVGR------GAAGQARLPWVTGG-GXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAFFSDACATASLKTPVKHMLTTAASDLGVAVRRGRRPDTGKAASSAATVPTRRKPPAPS 667          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig924.15676.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L0S8_9PHAE1.230e-8244.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ68_ECTSI4.030e-7645.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 241..261

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig924contigP-lacustris_contig924:44468..46252 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig924.15676.1mRNA_P-lacustris_contig924.15676.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig924 42089..46432 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig924.15676.1 ID=prot_P-lacustris_contig924.15676.1|Name=mRNA_P-lacustris_contig924.15676.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=595bp
MGDQQPPFEREAAESEAWDSDDNDDNGQGVDSPDEPSNNAGGNVGGNAIR
GGGNELEHSRESAAECFTDSSSEFCFYGNLNQSSPKRPIEEGSDWDGSAS
QSGDDVENETGRRLPLSANSDLQWSKVAAGDRRGGDSPSPRLSPSITQER
YRQTSPSSRRLSTQSGVPVIEAVSVTQGDTIQRSREDCKPNQTQIRGADE
AETQKMFPSITTGPAGAEEAGILHVLRAELSDLREYILRSERKQEAQLRD
LGTRLEAQERRSGPSATDTDRKGAAPHTVPGEGEIATAQASFAIDEAAEA
GTCQGNGGSRGGTPHGAAVRNPFAGTGGGAATTPRDHFPAFEDALLDRGD
ADENGTTPRGTGGEEGGCRKEGGEREGSRSDIHNDPFDFSIDTLSHINNH
TDFGTDAPRTAGLPVAAAATSPNFGRDGKGVKGQRGKTRPRWVMAGPSEA
DAGEHLKRGRGGEEDEVFDAKDTAAEEAFFSDACATASLQTPVKHMLASA
VSDLGVAVRRGKRDAKTITPARRKLHARSSKVGHRARRDCVVGLSVEQGR
LDVRAFYWINSARSFAWPIFSPSRPLISKEMARRKMAVAYRSSA*
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