prot_P-lacustris_contig922.15664.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig922.15664.1
Unique Nameprot_P-lacustris_contig922.15664.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length220
Homology
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BLAST of mRNA_P-lacustris_contig922.15664.1 vs. uniprot
Match: D7FTB1_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTB1_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 8.280e-52
Identity = 100/165 (60.61%), Postives = 112/165 (67.88%), Query Frame = 0 
Query:    1 MFSFASSESSTILSSISGDVRGWNSGPLLVAGQNNPRRQKQTKHD-LQLLRSTDFKEEGIELIKVLFDFYDRDRDGMLTVDEACLLCKTLGYHPVERSSIRASDDGLVAFRQLVQSAGFVRGSQVPPAARGGQTKHFFRMATRNPSSPMESKQASFF--QTIGVD 162
            MFSFASSESSTI+SS  GD R +  GPLLVAG+ NPRR K T H+  QLLR T FKEE +EL+KVLFD YDRDRDGMLTV+EACLLC                        Q +QSAGFVRGS VPP ARGG TKHFFRMA R+ S+PM SKQA  +  +TI  D
Sbjct:    1 MFSFASSESSTIVSSAGGDFRAFKPGPLLVAGEANPRRPKSTDHEHRQLLRLTGFKEEDVELMKVLFDMYDRDRDGMLTVEEACLLCT-----------------------QFIQSAGFVRGSHVPPTARGGHTKHFFRMANRSSSTPMGSKQARLYSLETIRTD 142
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BLAST of mRNA_P-lacustris_contig922.15664.1 vs. uniprot
Match: A0A836CHV2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHV2_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.740e-7
Identity = 38/119 (31.93%), Postives = 61/119 (51.26%), Query Frame = 0 
Query:   84 LLCKTLGYHPVERSSIRASDDGLVAFRQLVQSAGFVRGSQVPPAARGGQTKHFFRMATRNPSSPME---SKQASFFQTIGVD-LPLSALERIANRISTTGEPRFTEEELVSYVGNIQSR 198
            +LC+T+GYHPV+++ +  ++ G +    +++ A  VR +Q     R G  +HFFRMA R   +           F + +G D LP  ALER    +S   E    E++LV+Y     +R
Sbjct:    1 MLCRTVGYHPVDKTLLWCNERGGMDLESVIRCASQVR-NQALARDRRGAVRHFFRMAQRRDGAAAALDADALGRFLRALGADALPRPALERACEALSGRRERDVYEDDLVAYARRAWAR 118
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig922.15664.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTB1_ECTSI8.280e-5260.61EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836CHV2_9STRA1.740e-731.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 36..217
e-value: 1.8E-6
score: 29.4
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 57..92
score: 12.087
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 57..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig922contigP-lacustris_contig922:32435..37122 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig922.15664.1mRNA_P-lacustris_contig922.15664.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig922 32435..37122 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig922.15664.1 ID=prot_P-lacustris_contig922.15664.1|Name=mRNA_P-lacustris_contig922.15664.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=220bp
MFSFASSESSTILSSISGDVRGWNSGPLLVAGQNNPRRQKQTKHDLQLLR
STDFKEEGIELIKVLFDFYDRDRDGMLTVDEACLLCKTLGYHPVERSSIR
ASDDGLVAFRQLVQSAGFVRGSQVPPAARGGQTKHFFRMATRNPSSPMES
KQASFFQTIGVDLPLSALERIANRISTTGEPRFTEEELVSYVGNIQSRQD
ALSQKHAAATNRADYGHSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair