prot_P-lacustris_contig921.15654.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig921.15654.1
Unique Nameprot_P-lacustris_contig921.15654.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length196
Homology
BLAST of mRNA_P-lacustris_contig921.15654.1 vs. uniprot
Match: D7FKD0_ECTSI (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKD0_ECTSI)

HSP 1 Score: 327 bits (839), Expect = 1.970e-112
Identity = 153/195 (78.46%), Postives = 165/195 (84.62%), Query Frame = 0
Query:    1 MVISVVAKYMQAYKQFGWKATLTKMYMVGDVKFXXXXXXXXXXXXXXXXXXXXYGQHRWVEYADIENYDSSSVTAAWHPWLHHMSDYTPSPAAQLPEMKHIEIAVGQHTPHDSFLAPGRVDDVNRSTWRPRGAGVGNIWQKPGEPDMYYKQPGHPQHKLSSKGGRFSKQKSMETWDPADPKGLNTKQPIRDLTEI 195
            MV+SVVAKYMQAY+QFG +A LTKMY VGD+KF                    YGQHRWVEYADI NYDSSSVTA+WHPWLHHMSD+TPS AA+LPEMK IEIAVGQHTPH+ F+APGRVDDVNRSTWRPRGAG+GNIWQ+PGEPDMYYKQPGHPQH LS KGGRFSKQKSMETWDP DPKGLNTKQPIRDLTE+
Sbjct:    1 MVVSVVAKYMQAYRQFGLRAALTKMYTVGDIKFGDLKGEDSHGNKYYENKDYPYGQHRWVEYADIHNYDSSSVTASWHPWLHHMSDHTPSAAAELPEMKPIEIAVGQHTPHNDFVAPGRVDDVNRSTWRPRGAGMGNIWQEPGEPDMYYKQPGHPQHALSDKGGRFSKQKSMETWDPKDPKGLNTKQPIRDLTEV 195          
BLAST of mRNA_P-lacustris_contig921.15654.1 vs. uniprot
Match: W7TFP2_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFP2_9STRA)

HSP 1 Score: 165 bits (418), Expect = 2.180e-48
Identity = 89/199 (44.72%), Postives = 117/199 (58.79%), Query Frame = 0
Query:    4 SVVAKYMQAYKQFGWKATLTKMYMVGDVKFXXXXXXXXXXXXXXXXXXXXYGQHRWVEYADIENYDSSSVTAAWHPWLHHMSDYTPSPAAQLPEMKHIEIAVGQHTPHDSFLAPGRVD-----DVNRSTWRPRGAGVGNIWQKPGEPDMYYKQPGHP---QHKLSSKGGRFSKQKSMETWDPADPKGLNTKQPIRDLTE 194
            SVV KYM+A + +GW+ TL KMY +G+VKF                    +GQHRWVEY DI NY+ SS+   WH W+HHM+D  P+  A + E   ++IA GQHTP+   +A G  D      +N +  R RG GVG++ QK GEPD ++ QPGHP   + +   KGGRF   K  E W+P+DP+G  T QPIR L E
Sbjct:    3 SVVQKYMKALRVYGWRETLYKMYSMGEVKFGDLKGVDVNGNKYFENVEYPFGQHRWVEYKDIHNYEPSSIPPEWHGWIHHMTDEVPAGKAGVTEPG-MKIAEGQHTPYQ--VAAGLTDYQMEGQLNWTAHRSRGYGVGSLHQKAGEPDKFWVQPGHPLAAKKQEKGKGGRFEGLKGYEAWNPSDPEGKKTAQPIRSLDE 198          
BLAST of mRNA_P-lacustris_contig921.15654.1 vs. uniprot
Match: A0A4D9CLK1_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CLK1_9STRA)

HSP 1 Score: 165 bits (418), Expect = 1.160e-47
Identity = 89/199 (44.72%), Postives = 117/199 (58.79%), Query Frame = 0
Query:    4 SVVAKYMQAYKQFGWKATLTKMYMVGDVKFXXXXXXXXXXXXXXXXXXXXYGQHRWVEYADIENYDSSSVTAAWHPWLHHMSDYTPSPAAQLPEMKHIEIAVGQHTPHDSFLAPGRVD-----DVNRSTWRPRGAGVGNIWQKPGEPDMYYKQPGHP---QHKLSSKGGRFSKQKSMETWDPADPKGLNTKQPIRDLTE 194
            SVV KYM+A + +GW+ TL KMY +G+VKF                    +GQHRWVEY DI NY+ SS+   WH W+HHM+D  P+  A + E   ++IA GQHTP+   +A G  D      +N +  R RG GVG++ QK GEPD ++ QPGHP   + +   KGGRF   K  E W+P+DP+G  T QPIR L E
Sbjct:   60 SVVQKYMKALRVYGWRETLYKMYSMGEVKFGDLKGVDVNGNKYFENVEYPFGQHRWVEYKDIHNYEPSSIPPEWHGWIHHMTDEVPAGKAGVTEPG-MKIAEGQHTPYQ--VATGLTDYQMEGQLNWTAHRSRGYGVGSLHQKAGEPDKFWVQPGHPLAAKKQEKGKGGRFEGLKGYEAWNPSDPEGKKTAQPIRSLDE 255          
BLAST of mRNA_P-lacustris_contig921.15654.1 vs. uniprot
Match: A0A835ZAE7_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAE7_9STRA)

HSP 1 Score: 159 bits (403), Expect = 3.270e-46
Identity = 82/190 (43.16%), Postives = 111/190 (58.42%), Query Frame = 0
Query:    9 YMQAYKQFGWKATLTKMYMVGDVKFXXXXXXXXXXXXXXXXXXXXYGQHRWVEYADIENYDSSSVTAAWHPWLHHMSDYTPSPAAQLPEMKHIEIAVGQHTPHDSFLAPGRVDDV---NRSTWRPRGAGVGNIWQKPGEPDMYYKQPGHPQHKLSSKGGRFSKQKSMETWDPADPKGLNTKQPIRDLTEI 195
            Y  A +++G + T+ KMYMVG++ F                    YG HRWVEYAD  NYDSS+VT  WH WLH+M D  P  +A     +H   +     P+D+ + P     V   N S +RPRG GVGN++QK GEP++YYKQPGHP + +S KGGRF+ +  +E  DP +P  LN K+P+R L E+
Sbjct:    5 YWNAIRKWGLRETVRKMYMVGEINFGDFKGADSNGNKYYENRSKIYGTHRWVEYADCHNYDSSTVTPEWHGWLHNMHDTPPDQSAD--PKRHELTSSHDDCPYDTHVGPASAAPVLHQNLSGFRPRGYGVGNLFQKWGEPELYYKQPGHPANPISDKGGRFNTEPEVEFADPNNPTMLNPKKPLRSLDEL 192          
BLAST of mRNA_P-lacustris_contig921.15654.1 vs. uniprot
Match: A0A7S0XDH0_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDH0_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.590e-33
Identity = 62/171 (36.26%), Postives = 94/171 (54.97%), Query Frame = 0
Query:    2 VISVVAKYMQAYKQFGWKATLTKMYMVGDVKFXXXXXXXXXXXXXXXXXXXXYGQHRWVEYADIENYDSSSVTAAWHPWLHHMSDYTPSPAAQLPEMKHIEIAVGQHTPHDSFLAPGRVDDVNRSTWRPRGAGVGNIWQKPGEPDMYYKQPGHPQHKLSSKGGRFSKQKSM 172
            +I+ V K++++YK+ G+  TL ++YM+GD+KF                    + QHRW+EYADI ++D+S +   WH W+HHM D  P        +    ++   +  H  +     ++ VN +T+R RG  VG++   P EPD YYKQPGHP H L  KGGR+   KS+
Sbjct:    1 MIAPVTKFLRSYKERGFWGTLIQIYMIGDIKFGVLKGTDRFGNKYYEDLSAPFNQHRWIEYADIHDFDASMIQPEWHGWMHHMYDEVPGEGTIKTGIPLTPVSHAVYKNHVGYSNVEPLEQVNLTTYRSRGYKVGSLKTGPDEPDRYYKQPGHPLHPLVEKGGRYKHIKSI 171          
BLAST of mRNA_P-lacustris_contig921.15654.1 vs. uniprot
Match: A0A7S2GA95_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GA95_9STRA)

HSP 1 Score: 124 bits (311), Expect = 8.520e-32
Identity = 71/185 (38.38%), Postives = 97/185 (52.43%), Query Frame = 0
Query:    4 SVVAKYMQAYKQFGWKATLTKMYMVGDVKFXXXXXXXXXXXXXXXXXXXXYGQHRWVEYADIENYDSSSVTAAWHPWLHHMSDYTPSPAAQLPEMK---HIEIAVGQHTPHDSFLAPGRVDD---VNRSTWRPRGAGVGNIWQKPGEPDMYYKQPGHPQHKLSSKGGRFSKQKSMETWDPADPKG 182
            +++ K+M   K +G + T+ + Y +GD+KF                    +GQHRWVEYADI NYD++SV   WH W+ HM D   S A +    K    +EI  G H+ +D  +     +    +N +  R RG  +G I QKP E D Y+K  G  Q+K S+  GRF  QK ME WDPADP G
Sbjct:   41 NLITKWMTGVKYYGLQKTIEQAYTLGDIKFGECVGTDVNGNQYFENLDYPHGQHRWVEYADIHNYDAASVPPEWHGWMTHMQDAPGSDAREFITEKLKTKLEIDKGDHSIYDHHVGHTTYEMDTLLNHTMHRKRGFNIGGIKQKPEEEDKYHKHAGSAQNKGST--GRFESQKGMEYWDPADPDG 223          
BLAST of mRNA_P-lacustris_contig921.15654.1 vs. uniprot
Match: A0A7S3HS43_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HS43_9STRA)

HSP 1 Score: 107 bits (268), Expect = 3.800e-26
Identity = 58/165 (35.15%), Postives = 88/165 (53.33%), Query Frame = 0
Query:    8 KYMQAYKQFGWKATLTKMYMVGDVKFXXXXXXXXXXXXXXXXXXXXYGQHRWVEYADIENYDSSSVTAAWHPWLHHMSDYTPSPAAQLPEMKHIEIAVGQHTPHDSFLAPGRVD---------DVNRSTWRPRGAGVGNIWQKPGEPDMYYKQPGHPQHKLSSKG 163
            K  +A K+ G K  LT++Y++GD+KF                    +GQHRWVEY +I NYDS+ +   WH W+HH+ D TP+    +P+  ++  +   H  +++ +  GRVD          ++ + +R RG  +G++   P E D YYKQPGHP  K S KG
Sbjct:    9 KISRALKERGLKGALTQIYLIGDLKFGELKGTDKFGNKYFENQDLPFGQHRWVEYKNIHNYDSTMIQPEWHGWMHHVYDETPNDPVAVPD--YLPTSTISHAIYNTHV--GRVDPAAAANDREQIDTTQYRRRGYKIGSLMTGPDEEDHYYKQPGHPLSKDSEKG 169          
BLAST of mRNA_P-lacustris_contig921.15654.1 vs. uniprot
Match: A0A067BXH8_SAPPC (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BXH8_SAPPC)

HSP 1 Score: 102 bits (255), Expect = 7.590e-24
Identity = 55/156 (35.26%), Postives = 78/156 (50.00%), Query Frame = 0
Query:    4 SVVAKYMQAYKQFGWKATLTKMYMVGDVKFXXXXXXXXXXXXXXXXXXXXYGQHRWVEYA--DIENYDSSSVTAAWHPWLHHMSDYTPSPAAQLPE-MKHIEIAVGQHTPHDSFLAPGRVDDVNRSTWRPRGAGVGNI-WQKPGEPDMYYKQPGHP 155
            SVV KY++A K++GWK  L K+Y  GD+KF                    +GQ RW EY     + +    +   WH W+H +SD  P  A Q PE    + I+   + P+ S + P +    N++T+R RG G+ N  W K  EP+ YY QP HP
Sbjct:   14 SVVHKYLEANKRYGWKECLWKLYNPGDIKFGKEVGEDQFGNKYYEDTTELHGQQRWTEYKVKTHDEFGGDQIPPEWHIWMHSLSDAKPGEAGQNPENWSKVPISTVSNAPYTSHVGPTKPFTDNQTTYRSRGYGIDNYKWLKANEPERYYMQPNHP 169          
BLAST of mRNA_P-lacustris_contig921.15654.1 vs. uniprot
Match: A0A1V9ZWS6_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWS6_9STRA)

HSP 1 Score: 101 bits (252), Expect = 2.110e-23
Identity = 56/156 (35.90%), Postives = 76/156 (48.72%), Query Frame = 0
Query:    4 SVVAKYMQAYKQFGWKATLTKMYMVGDVKFXXXXXXXXXXXXXXXXXXXXYGQHRWVEYA--DIENYDSSSVTAAWHPWLHHMSDYTPSPAAQLPEM-KHIEIAVGQHTPHDSFLAPGRVDDVNRSTWRPRGAGVGNI-WQKPGEPDMYYKQPGHP 155
            SVV KY++A K++GWK  L K+Y  GD+KF                    +GQ RW EY     + + +  +   WH W+H  SD  P  A Q PE    + I+   H P+ + + P      N +T R RG G+ N  W K GEP+ YY QP HP
Sbjct:   14 SVVHKYLEANKRYGWKECLWKLYNPGDIKFGKEVGTDQFGNKYYEDTTDLHGQQRWTEYKVKTHDEFSADQIPPEWHLWMHSFSDAKPGEAGQNPETWAKVPISTVSHAPYGNHVGPTTPFTENPTTLRRRGYGIDNHKWLKAGEPEKYYMQPNHP 169          
BLAST of mRNA_P-lacustris_contig921.15654.1 vs. uniprot
Match: A0A2D4CHP0_PYTIN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CHP0_PYTIN)

HSP 1 Score: 100 bits (250), Expect = 6.770e-23
Identity = 51/153 (33.33%), Postives = 78/153 (50.98%), Query Frame = 0
Query:    5 VVAKYMQAYKQFGWKATLTKMYMVGDVKFXXXXXXXXXXXXXXXXXXXXYGQHRWVEYA--DIENYDSSSVTAAWHPWLHHMSDYTPSPAAQLP-EMKHIEIAVGQHTPHDSFLAPGRVDDVNRSTWRPRGAGVGNIWQKPGEPDMYYKQPGH 154
            V  KYM+AYK++GWK +L K+Y  GD+KF                    +GQ R+ EY     ++++ S +   WH W+ H++D TP    Q P     + I+   H P+ + + P +   +N +  R RG GVG++   P EPD +Y Q GH
Sbjct:   37 VYEKYMEAYKRYGWKLSLWKLYNPGDIKFGKLVGEDEFGHKYYEDPTDLHGQQRYTEYKVESFDDFEGSQIPPQWHMWMQHITDATPGSPGQDPANWAKVPISTVSHAPYANHVGPSKPYKMNMTLARSRGYGVGSVQTSPDEPDQFYIQRGH 189          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig921.15654.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D7FKD0_ECTSI1.970e-11278.46NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
W7TFP2_9STRA2.180e-4844.72NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A4D9CLK1_9STRA1.160e-4744.72NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A835ZAE7_9STRA3.270e-4643.16NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7S0XDH0_9STRA1.590e-3336.26NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7S2GA95_9STRA8.520e-3238.38NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7S3HS43_9STRA3.800e-2635.15NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A067BXH8_SAPPC7.590e-2435.26NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A1V9ZWS6_9STRA2.110e-2335.90NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A2D4CHP0_PYTIN6.770e-2333.33NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007763NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12PFAMPF05071NDUFA12coord: 34..97
e-value: 2.2E-17
score: 63.7
IPR007763NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12PANTHERPTHR12910NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2coord: 4..177
NoneNo IPR availablePANTHERPTHR12910:SF2NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 12coord: 4..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig921contigP-lacustris_contig921:6312..9013 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig921.15654.1mRNA_P-lacustris_contig921.15654.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig921 6312..9664 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig921.15654.1 ID=prot_P-lacustris_contig921.15654.1|Name=mRNA_P-lacustris_contig921.15654.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=196bp
MVISVVAKYMQAYKQFGWKATLTKMYMVGDVKFGDLKGEDAHGNKYYENK
EYPYGQHRWVEYADIENYDSSSVTAAWHPWLHHMSDYTPSPAAQLPEMKH
IEIAVGQHTPHDSFLAPGRVDDVNRSTWRPRGAGVGNIWQKPGEPDMYYK
QPGHPQHKLSSKGGRFSKQKSMETWDPADPKGLNTKQPIRDLTEI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007763NDUFA12