prot_P-lacustris_contig92.15636.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig92.15636.1
Unique Nameprot_P-lacustris_contig92.15636.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length222
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig92.15636.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 6..22
e-value: 0.63
score: 12.5
coord: 29..45
e-value: 0.084
score: 17.8
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 6..20
score: 8.746
NoneNo IPR availableGENE3D4.10.60.10coord: 1..61
e-value: 1.2E-5
score: 26.9
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 5..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig92contigP-lacustris_contig92:81003..81668 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig92.15636.1mRNA_P-lacustris_contig92.15636.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig92 81003..81668 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig92.15636.1 ID=prot_P-lacustris_contig92.15636.1|Name=mRNA_P-lacustris_contig92.15636.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=222bp
MSSANRCPRCGRIGHHLEDCGATLRFEGNCDACGEYGHRSRMCRVVLTRA
QPHAHIACYGGGFTGGFSGGSSGTLPYQQLGQQYRRRRRRRYRRPSFQLH
SLRRWGQPDLPPQQQERQYWWRPPTAILHPMAGTEAPAYAGVAVSTPAVS
STSERTALGGAVSAATAAAVPGIRVFPVASAAAPAGVPAPMTSAGAAGAA
PGGEVLPAVLAGAPRVPTTTLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf