prot_P-lacustris_contig917.15621.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig917.15621.1
Unique Nameprot_P-lacustris_contig917.15621.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length391
Homology
BLAST of mRNA_P-lacustris_contig917.15621.1 vs. uniprot
Match: D8LM72_ECTSI (R3H domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM72_ECTSI)

HSP 1 Score: 224 bits (571), Expect = 3.020e-62
Identity = 188/264 (71.21%), Postives = 192/264 (72.73%), Query Frame = 0
Query:   56 VSPKKGNGASTNKGSAGESAGGAVTTGGSGTPVGSAKAKAGAAAAGAAGKRTDREAKQAGGVVTSQGPDGTTGFGSGRGKPVPGAGGGRGGGARAGGLQQ-GSDGPDRGDYGRVGGGRXXGGPGXXXXXXXXXXXXXXRRPPVNAGEWKGQRGMQRNRMAEKSDPDFVRNYDNYRPSFAPYRQLADPGGGGAYGXXXXXXXXXXXXXXXXXXXXSPRLLHQHQQQPHPMMNPALQHGFGQP-HAMMAMPAGMPGQQFRGQMPGQ 317
             SP +G G     G AGE A       GS TP G  KA       GAAGKRTDREAKQAGG VTSQGPDGT GFGSGRGKPVPG G     G RAGGLQQ GSDGPDRGDYGR G   XX GPG   XXXXXXXXXXXRRP VNAGEWKGQRGMQRNRMAEKSDPDFVRNYDNYRPSFAPYRQLADPGG G  GXXXXXXXXXXXXXXXXXXXX              MM+ A+QH  GQ  HAMMA+PAGM G Q RGQMPGQ
Sbjct:  568 ASPTRGKG----NGVAGEGAATVAAATGSSTPSGKTKA-------GAAGKRTDREAKQAGGAVTSQGPDGTMGFGSGRGKPVPGGGXXXXXGGRAGGLQQQGSDGPDRGDYGR-GXXXXXXGPGGRMXXXXXXXXXXXRRPAVNAGEWKGQRGMQRNRMAEKSDPDFVRNYDNYRPSFAPYRQLADPGGRGGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-----MMSAAVQHAHGQAAHAMMAIPAGMQGHQLRGQMPGQ 814          
BLAST of mRNA_P-lacustris_contig917.15621.1 vs. uniprot
Match: A0A6H5KC01_9PHAE (SUZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC01_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 3.720e-58
Identity = 202/336 (60.12%), Postives = 212/336 (63.10%), Query Frame = 0
Query:    2 KVKGKALNKVERNASA---AKAEHPAAA-MSNGDKAPSSXXXXXXXXXXXXATGTTAKV-SPKKGNGASTNKGSAGESAGGAVTTG---GSGTPVGSAKAKAGAAAAGAAGKRTDREAKQAGGVVTSQGPDGTTGFGSGRGKPVPG---------AGGGRGG--GARAGGLQQGSDGPDRGDYGRVGGGRXXGGPGXXXXXXXXXXXXXXRRPPVNAGEWKGQRGMQRNRMAEKSDPDFVRNYDNYRPSFAPYRQLADPGGGGAYGXXXXXXXXXXXXXXXXXXXXSPRLLHQHQQQPHPMMNPALQHGFGQP-HAMMAMPAGMPGQQFRGQMPGQ 317
            K KGK LN  ER  +A   AKA+ PAAA +SNGD+    XXXXXXXXXXXX  G   K  SP KG G     G AGE A  AV      GS TP G  KA       GAAGKRTDREAKQAGG VTSQGPDGT GFGSGRGKPVPG         A  GR G  G R  G    ++GP                     X  XXXXX   RRP VNAGEWKGQRGMQRNRMAEKSDPDFVRNYD+YRPSFAPYRQLADPGGGG  G    XXXXXXXXXXX     SPRLL QH   PH MM+ A+QH  GQ  HAMMA+PAGM G Q RGQMPGQ
Sbjct:  399 KAKGKTLNNAERGVAAGAGAKADRPAAAALSNGDRXXXXXXXXXXXXXXXXXXGVATKTASPTKGKG----NGVAGEGA--AVXXXXXTGSSTPSGKTKA-------GAAGKRTDREAKQAGGAVTSQGPDGTMGFGSGRGKPVPGXXXXXXXXXAAAGREGERGVREEGGAGAAEGP-------------------VSXGAXXXXXRGSRRPAVNAGEWKGQRGMQRNRMAEKSDPDFVRNYDHYRPSFAPYRQLADPGGGG--GGGRGXXXXXXXXXXXQQPQPSPRLLQQH---PHAMMSAAVQHAHGQAAHAMMAIPAGMQGHQLRGQMPGQ 697          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig917.15621.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LM72_ECTSI3.020e-6271.21R3H domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KC01_9PHAE3.720e-5860.12SUZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig917contigP-lacustris_contig917:55597..57365 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig917.15621.1mRNA_P-lacustris_contig917.15621.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig917 54689..64310 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig917.15621.1 ID=prot_P-lacustris_contig917.15621.1|Name=mRNA_P-lacustris_contig917.15621.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=391bp
MKVKGKALNKVERNASAAKAEHPAAAMSNGDKAPSSSTAAAPAATTPPAT
GTTAKVSPKKGNGASTNKGSAGESAGGAVTTGGSGTPVGSAKAKAGAAAA
GAAGKRTDREAKQAGGVVTSQGPDGTTGFGSGRGKPVPGAGGGRGGGARA
GGLQQGSDGPDRGDYGRVGGGRGGGGPGGRMGGGGGGGGRGSRRPPVNAG
EWKGQRGMQRNRMAEKSDPDFVRNYDNYRPSFAPYRQLADPGGGGAYGGG
GRGGRGGRDGHGGQPSQPSPRLLHQHQQQPHPMMNPALQHGFGQPHAMMA
MPAGMPGQQFRGQMPGQPGVLLVQQQQQQHLWQQHHHQLEAQAMAAAAAA
AAGGGACTVRRPYPRTRNVRPGVRRPAGCRGRFGWFSGSR*
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