prot_P-lacustris_contig917.15619.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig917.15619.1
Unique Nameprot_P-lacustris_contig917.15619.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length596
Homology
BLAST of mRNA_P-lacustris_contig917.15619.1 vs. uniprot
Match: D8LM70_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM70_ECTSI)

HSP 1 Score: 575 bits (1483), Expect = 7.850e-200
Identity = 310/496 (62.50%), Postives = 346/496 (69.76%), Query Frame = 0
Query:   82 MQAADGGPEAELGGGGEELPQTVFPPRRPKTYKLKKGQQVGVRFINTSGDPDVCVAAYPGETV---AKRAGVKIATACNTGICGTCMTDLEDPNGKGYRPGFQVVRACITPVRGRIVWYSTLLVPRAGGGGDGFGHLPQPFQEREAQQPAGGRKKXXXXXXXXXSIVGDGGGRNEAFRGWLGRRLPGIKHHKPMSQTHPIPSHPKPLQRDSDESASSILAKKNFATTLTDPPLIKTPISYNAQRRMENKYMYDDLPANVKRNNAPWGGRDLEEKMDAARQVDIRQRMQRERRERVNYFLDNTDRPIAKTGDIMALSQEEVDTRSRFFNSVPDTWEEAYGPPNPPEVQREIDEMAGRRSEGISAPRMAAYRSARQIPRYRFFGDPPLKEQDETYFSEQEDPMRRIKFEDAAELDRLAIMSGAASQDKHHFVFRDSRTGRIAPAHKAGTPGTVRAEMREKALPVCSACEGTGLQECMQCRAMGINRAANGLNDLVCPK 574
             Q ADG  E E   GG  L QTVFPPRRPKTY+LKKGQ VGVRFINTSGDPDVC AAYPGE V   AKR GVKIATACN+GICGTCMTDLED NGK YRPGFQVVRAC+TP                     G    P   +  +      G K            V D   R E   GW     P                        +D+  +     KNFA TL DP  ++TPISYNAQ+RMENKYMYD LP NV+R+N P GGRDLEEKMDAARQ+DIRQRMQ+ERRERVN++LD   RPIA T DIMALSQEEVD+RSRFFN VP TWE+AYGPPN PEV+RE  E  GR+SEG++  RM+ YRSARQIPRYRFFGDPPLKEQDE YF+E+EDPMRRIKFEDAAELDRLA++SG  SQDK+ FV+RDSRTGR+AP HKAG+PGTVRAEMREK LPVC +CEGTGLQ+C  C   GIN AA GL+DLVCP+
Sbjct:    2 QQDADGEVEPESEDGGA-LAQTVFPPRRPKTYELKKGQ-VGVRFINTSGDPDVCTAAYPGEIVTKVAKRCGVKIATACNSGICGTCMTDLEDANGKSYRPGFQVVRACVTP---------------------GLDIYPNRAKSGKLNNRLAGSKGKRKGEKMEAETVVDAMKRFE--EGWEDEYQP---------------------DGSNDDKNTPAFVSKNFAGTLVDPITVRTPISYNAQKRMENKYMYDALPENVRRSNPPGGGRDLEEKMDAARQIDIRQRMQKERRERVNHYLDLAHRPIASTADIMALSQEEVDSRSRFFNEVPSTWEQAYGPPNLPEVERERSETGGRKSEGVTEARMSLYRSARQIPRYRFFGDPPLKEQDEAYFAEREDPMRRIKFEDAAELDRLAVVSGENSQDKNLFVYRDSRTGRVAPPHKAGSPGTVRAEMREKQLPVCGSCEGTGLQDCQVCHGTGINAAATGLHDLVCPR 451          
BLAST of mRNA_P-lacustris_contig917.15619.1 vs. uniprot
Match: A0A835YHE6_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHE6_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 2.900e-15
Identity = 47/89 (52.81%), Postives = 59/89 (66.29%), Query Frame = 0
Query:  108 RRPKTYKLKKGQQVGVRFINTSGDPDVCVAAYPGETV---AKRAGVKIATACNTGICGTCMTDLEDPN---GKGYRPGFQVVRACITPV 190
            +R  +  L+ G+ + VRFI T    D  VAA  GETV   A RAG+KIAT+C +G+CGTC TD+EDPN    K YRPGFQ +RAC+  V
Sbjct: 2192 QREGSVPLQPGE-ITVRFIGTEDGEDKLVAAKSGETVTTVAARAGIKIATSCRSGLCGTCTTDMEDPNWPLNKTYRPGFQTIRACVASV 2279          
BLAST of mRNA_P-lacustris_contig917.15619.1 vs. uniprot
Match: A0A5J4Z3Q4_PORPP (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3Q4_PORPP)

HSP 1 Score: 72.4 bits (176), Expect = 2.360e-10
Identity = 52/142 (36.62%), Postives = 74/142 (52.11%), Query Frame = 0
Query:   58 ALVSRSARAFRAPRTRRPAHRRLG-----MQAADGGPEAELGGGGEELPQTVFPPR-RPKTYKLKKGQQVGVRFINTSGDPDVCVAAYPGET---VAKRAGVKIATACNTGICGTCMTDLEDPNGKGYRPGFQVVRACITPV 190
            A+V+R AR ++A R +R AHR LG      +A+D    ++     ++   T    + RP  Y L  G+ + VRFINT    D+  AA PG+    V     ++I   C TG+CG C  +LEDP   G   G Q++RAC T V
Sbjct:   36 AVVAR-ARLWQAKREKRQAHRSLGDWQLNAEASDSSGASDGDENKKDTQATATTAQGRPIDYTLLPGE-IAVRFINTPSGKDIVAAAKPGDNLMAVGDSVDLRIPRGCQTGLCGACTCELEDPEWAG---GSQLIRACSTAV 172          
BLAST of mRNA_P-lacustris_contig917.15619.1 vs. uniprot
Match: A0A7S0HU56_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HU56_9CRYP)

HSP 1 Score: 63.2 bits (152), Expect = 2.120e-7
Identity = 35/92 (38.04%), Postives = 49/92 (53.26%), Query Frame = 0
Query:  108 RRPKTYKLKKGQQVGVRFIN------TSGDPDVCVAAYPGET---VAKRAGVKIATACNTGICGTCMTDLEDPNGKGYRPGFQVVRACITPV 190
            +R K Y+L  G+ + VRF+N      + G  DV  AA PG+    V    G+ +   C TG+CG+C  D+EDP+  G R    + RAC T V
Sbjct:   77 KRIKNYELGPGE-IAVRFVNAPGRYPSDGANDVIAAAKPGDVLLAVGDSVGISLPRGCQTGLCGSCTCDVEDPSFPGSR---SIARACCTKV 164          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig917.15619.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LM70_ECTSI7.850e-20062.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YHE6_9STRA2.900e-1552.812Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A5J4Z3Q4_PORPP2.360e-1036.622Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S0HU56_9CRYP2.120e-738.04Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 156..164
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 30..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..595
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..34
score: 0.723
IPR036410Heat shock protein DnaJ, cysteine-rich domain superfamilySUPERFAMILY57938DnaJ/Hsp40 cysteine-rich domaincoord: 533..591
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 129..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig917contigP-lacustris_contig917:29005..43075 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig917.15619.1mRNA_P-lacustris_contig917.15619.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig917 29005..44569 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig917.15619.1 ID=prot_P-lacustris_contig917.15619.1|Name=mRNA_P-lacustris_contig917.15619.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=596bp
MGCTSVPRTAMSSRRRWCWSTSAMLALTVALASAFRQPIPAATPSAGGAF
VSWSGCSALVSRSARAFRAPRTRRPAHRRLGMQAADGGPEAELGGGGEEL
PQTVFPPRRPKTYKLKKGQQVGVRFINTSGDPDVCVAAYPGETVAKRAGV
KIATACNTGICGTCMTDLEDPNGKGYRPGFQVVRACITPVRGRIVWYSTL
LVPRAGGGGDGFGHLPQPFQEREAQQPAGGRKKGRKEGRKEGSIVGDGGG
RNEAFRGWLGRRLPGIKHHKPMSQTHPIPSHPKPLQRDSDESASSILAKK
NFATTLTDPPLIKTPISYNAQRRMENKYMYDDLPANVKRNNAPWGGRDLE
EKMDAARQVDIRQRMQRERRERVNYFLDNTDRPIAKTGDIMALSQEEVDT
RSRFFNSVPDTWEEAYGPPNPPEVQREIDEMAGRRSEGISAPRMAAYRSA
RQIPRYRFFGDPPLKEQDETYFSEQEDPMRRIKFEDAAELDRLAIMSGAA
SQDKHHFVFRDSRTGRIAPAHKAGTPGTVRAEMREKALPVCSACEGTGLQ
ECMQCRAMGINRAANGLNDLVCPKCHGQGYVPCPACAGSGVGKLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0060582Fe2S_fd_BS
IPR036410HSP_DnaJ_Cys-rich_dom_sf
IPR0360102Fe-2S_ferredoxin-like_sf