prot_P-lacustris_contig914.15598.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig914.15598.1
Unique Nameprot_P-lacustris_contig914.15598.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length90
Homology
BLAST of mRNA_P-lacustris_contig914.15598.1 vs. uniprot
Match: D8LRM6_ECTSI (Dynein light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRM6_ECTSI)

HSP 1 Score: 172 bits (437), Expect = 1.470e-54
Identity = 86/89 (96.63%), Postives = 86/89 (96.63%), Query Frame = 0
Query:    1 MSARPVIKTSTMPPDMQQEAAIQVAQDAIRDNNLEKDIANAVKGAFEGLYPSLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFSTA 89
            MSARPVIKTSTM PDMQ EAAIQVAQDAIRDNNLEKDIANAVK AFEGLYPSLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFSTA
Sbjct:    1 MSARPVIKTSTMAPDMQ-EAAIQVAQDAIRDNNLEKDIANAVKAAFEGLYPSLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFSTA 88          
BLAST of mRNA_P-lacustris_contig914.15598.1 vs. uniprot
Match: A0A836CI24_9STRA (Dynein light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI24_9STRA)

HSP 1 Score: 148 bits (373), Expect = 8.560e-45
Identity = 72/89 (80.90%), Postives = 81/89 (91.01%), Query Frame = 0
Query:    1 MSARPVIKTSTMPPDMQQEAAIQVAQDAIRDNNLEKDIANAVKGAFEGLYPSLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFSTA 89
            MSARPVIKTSTMP DMQ EAAIQVAQDAI+DNNLEK+IA+A+K  FE +YPS+WHCFVGRNFG FVTHE +KF+Y YIGQ+GVCLFSTA
Sbjct:    1 MSARPVIKTSTMPADMQ-EAAIQVAQDAIKDNNLEKEIAHAIKTNFERIYPSVWHCFVGRNFGSFVTHEQSKFIYFYIGQMGVCLFSTA 88          
BLAST of mRNA_P-lacustris_contig914.15598.1 vs. uniprot
Match: A0A7S2STQ1_9STRA (Dynein light chain n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STQ1_9STRA)

HSP 1 Score: 116 bits (291), Expect = 6.190e-32
Identity = 56/89 (62.92%), Postives = 70/89 (78.65%), Query Frame = 0
Query:    1 MSARPVIKTSTMPPDMQQEAAIQVAQDAIRDNNLEKDIANAVKGAFEGLYPSLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFSTA 89
            M+ARPVIK S+M PDMQ E AIQ AQDAI   N E++IA A++   E ++P+ WH  VGRNFGCFVTHE +KF+Y YIGQ+GVC+F+TA
Sbjct:   29 MAARPVIKHSSMTPDMQ-EMAIQCAQDAIAAKNTEQEIAMAIRQNIETMFPATWHVLVGRNFGCFVTHEASKFIYFYIGQVGVCMFATA 116          
BLAST of mRNA_P-lacustris_contig914.15598.1 vs. uniprot
Match: A0A7S1UG18_9STRA (Dynein light chain n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UG18_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.020e-29
Identity = 49/83 (59.04%), Postives = 67/83 (80.72%), Query Frame = 0
Query:    6 VIKTSTMPPDMQQEAAIQVAQDAIRDNNLEKDIANAVKGAFEGLYPSLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFST 88
            V+K S M  +MQ +AA+Q+AQDAIR++  E++IA+A+K  FE +Y + WHCFVGRNFGC+VTH+   FVY YIGQ+G+CLF+T
Sbjct:   41 VVKASRMEQEMQ-DAAVQIAQDAIREHMTEQEIASAIKQQFESIYHTTWHCFVGRNFGCYVTHQENAFVYFYIGQLGICLFAT 122          
BLAST of mRNA_P-lacustris_contig914.15598.1 vs. uniprot
Match: A0A7S1C452_9STRA (Dynein light chain n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C452_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 3.050e-24
Identity = 42/70 (60.00%), Postives = 54/70 (77.14%), Query Frame = 0
Query:   19 EAAIQVAQDAIRDNNLEKDIANAVKGAFEGLYPSLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFST 88
            E AI VA  AI+  N EK+ A+A+K   E L+P +WHCFVGR FGC+VTHE +KF+Y Y+GQ+GVCLFS+
Sbjct:  107 ERAIDVALRAIKSCNTEKETASAIKAQMEALFPGVWHCFVGRKFGCYVTHESSKFIYFYVGQLGVCLFSS 176          
BLAST of mRNA_P-lacustris_contig914.15598.1 vs. uniprot
Match: A0A564YX59_HYMDI (Dynein light chain n=1 Tax=Hymenolepis diminuta TaxID=6216 RepID=A0A564YX59_HYMDI)

HSP 1 Score: 90.9 bits (224), Expect = 3.220e-22
Identity = 42/77 (54.55%), Postives = 56/77 (72.73%), Query Frame = 0
Query:   12 MPPDMQQEAAIQVAQDAIRDNNLEKDIANAVKGAFEGLYPSLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFST 88
            MP DMQQ+A +++AQ+AI  N++EKDIA  +K  F+G Y   WHC VGRNFG +VTHE   F+Y Y+GQ+ V LF +
Sbjct:    1 MPEDMQQKA-VEIAQEAIARNSVEKDIAAHIKKEFDGRYGQTWHCIVGRNFGSYVTHETKHFIYFYMGQVAVLLFKS 76          
BLAST of mRNA_P-lacustris_contig914.15598.1 vs. uniprot
Match: K3WKC4_GLOUD (Dynein light chain n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKC4_GLOUD)

HSP 1 Score: 89.4 bits (220), Expect = 1.870e-21
Identity = 48/89 (53.93%), Postives = 60/89 (67.42%), Query Frame = 0
Query:    2 SARPVIKTSTMPPDMQQEAAIQVAQDAIRDNNLEKDIANAVKGAFEGLYPS-LWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFSTA 89
            + +PV+KTSTM PD+Q E  + VAQ A+     E+ IA  VK  FE  Y   LWHC VGRN  C+VTHE +KF+Y YIGQ+ V LF+TA
Sbjct:    3 NVKPVVKTSTMDPDLQDEVIL-VAQHAMDTEIDEQQIAAKVKQHFEQKYHGMLWHCCVGRNVACYVTHEQSKFLYFYIGQMAVVLFATA 90          
BLAST of mRNA_P-lacustris_contig914.15598.1 vs. uniprot
Match: U4LB13_PYROM (Dynein light chain n=1 Tax=Pyronema omphalodes (strain CBS 100304) TaxID=1076935 RepID=U4LB13_PYROM)

HSP 1 Score: 87.4 bits (215), Expect = 1.620e-20
Identity = 41/86 (47.67%), Postives = 58/86 (67.44%), Query Frame = 0
Query:    7 IKTSTMPPDMQQE---AAIQVAQDAIRDNNLEKDIANAVKGAFEGLYPSLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFSTA 89
            +KT+    DM ++   AA +VA+ A+++NN+EKDIA  +K  F+  Y + WHC VGRNFG FVTHE   F+Y Y+G + V L+ TA
Sbjct:   20 LKTTVKSVDMAEDMAAAAQEVAKKAMKENNVEKDIAQMIKKEFDAKYGNTWHCIVGRNFGSFVTHETKHFIYFYVGNLAVLLYKTA 105          
BLAST of mRNA_P-lacustris_contig914.15598.1 vs. uniprot
Match: A0A0S4IS05_BODSA (Dynein light chain n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4IS05_BODSA)

HSP 1 Score: 86.3 bits (212), Expect = 3.070e-20
Identity = 42/87 (48.28%), Postives = 56/87 (64.37%), Query Frame = 0
Query:    2 SARPVIKTSTMPPDMQQEAAIQVAQDAIRDNNLEKDIANAVKGAFEGLYPSLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFST 88
            +A+  +K   MP DM+  A I  AQ+ +   N EKDIA+ +K  F+  Y   WHCFVGRNFG FVTHE   ++Y Y+GQIGV +F +
Sbjct:    4 NAQATVKIVEMPKDMENFAII-CAQEGMEKYNTEKDIASHIKKEFDRKYNPTWHCFVGRNFGSFVTHETNHYIYFYLGQIGVMIFKS 89          
BLAST of mRNA_P-lacustris_contig914.15598.1 vs. uniprot
Match: A0A183SDF9_SCHSO (Dynein light chain n=3 Tax=Diphyllobothriidae TaxID=28843 RepID=A0A183SDF9_SCHSO)

HSP 1 Score: 85.5 bits (210), Expect = 6.710e-20
Identity = 39/85 (45.88%), Postives = 56/85 (65.88%), Query Frame = 0
Query:    4 RPVIKTSTMPPDMQQEAAIQVAQDAIRDNNLEKDIANAVKGAFEGLYPSLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFST 88
            R ++K + MP DMQQ+A ++VA  A+  N +EK+IA  +K  F+  +   WHC VGRNFGC+VTHE   F+Y  +GQ  + LF +
Sbjct:    9 RAIVKNADMPEDMQQDA-VEVATTAMNHNTIEKEIAAEIKKEFDRRFNPNWHCIVGRNFGCYVTHETKSFIYFLMGQTAILLFKS 92          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig914.15598.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRM6_ECTSI1.470e-5496.63Dynein light chain n=2 Tax=Ectocarpus TaxID=2879 R... [more]
A0A836CI24_9STRA8.560e-4580.90Dynein light chain n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S2STQ1_9STRA6.190e-3262.92Dynein light chain n=1 Tax=Rhizochromulina marina ... [more]
A0A7S1UG18_9STRA1.020e-2959.04Dynein light chain n=1 Tax=Phaeomonas parva TaxID=... [more]
A0A7S1C452_9STRA3.050e-2460.00Dynein light chain n=1 Tax=Bicosoecida sp. CB-2014... [more]
A0A564YX59_HYMDI3.220e-2254.55Dynein light chain n=1 Tax=Hymenolepis diminuta Ta... [more]
K3WKC4_GLOUD1.870e-2153.93Dynein light chain n=1 Tax=Globisporangium ultimum... [more]
U4LB13_PYROM1.620e-2047.67Dynein light chain n=1 Tax=Pyronema omphalodes (st... [more]
A0A0S4IS05_BODSA3.070e-2048.28Dynein light chain n=1 Tax=Bodo saltans TaxID=7505... [more]
A0A183SDF9_SCHSO6.710e-2045.88Dynein light chain n=3 Tax=Diphyllobothriidae TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001372Dynein light chain, type 1/2SMARTSM01375Dynein_light_2coord: 1..88
e-value: 1.6E-32
score: 124.1
IPR001372Dynein light chain, type 1/2PFAMPF01221Dynein_lightcoord: 5..87
e-value: 2.2E-26
score: 92.0
IPR001372Dynein light chain, type 1/2PANTHERPTHR11886DYNEIN LIGHT CHAINcoord: 5..87
IPR037177Dynein light chain superfamilyGENE3D3.30.740.10coord: 1..88
e-value: 2.4E-29
score: 103.2
IPR037177Dynein light chain superfamilySUPERFAMILY54648DLCcoord: 4..88
NoneNo IPR availablePANTHERPTHR11886:SF35DYNEIN LIGHT CHAIN 2, CYTOPLASMICcoord: 5..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig914contigP-lacustris_contig914:36219..37581 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig914.15598.1mRNA_P-lacustris_contig914.15598.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig914 36219..37581 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig914.15598.1 ID=prot_P-lacustris_contig914.15598.1|Name=mRNA_P-lacustris_contig914.15598.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=90bp
MSARPVIKTSTMPPDMQQEAAIQVAQDAIRDNNLEKDIANAVKGAFEGLY
PSLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFSTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001372Dynein_light_chain_typ-1/2
IPR037177DLC_sf