prot_P-lacustris_contig910.15570.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig910.15570.1
Unique Nameprot_P-lacustris_contig910.15570.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length309
Homology
BLAST of mRNA_P-lacustris_contig910.15570.1 vs. uniprot
Match: A0A6H5KU31_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU31_9PHAE)

HSP 1 Score: 334 bits (856), Expect = 9.680e-101
Identity = 211/308 (68.51%), Postives = 226/308 (73.38%), Query Frame = 0
Query:    1 MGVGEINAIIGRADDARRLFVSRSNLFVCGPVIKKPDLGSVLLEMADDEEVEATSDWGKSLPPEGGPTLPPWMPVQVVLFSINVQGHWATLHGNPMVTFARATDEIEDIIQRYGRRRGLEALESAGLRRGRSAVIDQFKPIYIDEERERXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSPSXXXXXXXXXXTKTMMDVEGSAGGEGGGHLLSPNSNGNGFVGHGNGNAVGGESASAGGGEXXXXXDEGTLLWRILSQKFPHYINQGLEETQLQVPNGKFPTIGFKKDNPNESRSAYRRAEQGIRIRGS 308
            MG GEINAII + DDARR FV+RSN +VCGPVIK+P++GSVLLEMAD+EEV+AT DWGK  PPEG P  PPWMP+QVVLFSINVQG WA+LHGNP+VTFA ATDEIEDIIQRYGRRRGLEALESAGLRRGRSAVIDQFKP YIDEERE XXXXXXXXXXXXXXXXXXXXXXXXXXX Q                     G AG EG G                                        +LLWRILS KFPHYINQGLE+TQ+QVPNGKFPTIGFKK+NPNESRS YRRAEQGIRIRGS
Sbjct: 1594 MGTGEINAIIEKGDDARRFFVARSNHYVCGPVIKEPNVGSVLLEMADEEEVKATCDWGKIPPPEGEPAPPPWMPIQVVLFSINVQGQWASLHGNPLVTFACATDEIEDIIQRYGRRRGLEALESAGLRRGRSAVIDQFKPTYIDEEREXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQQQVHPLPSAPPSSPTDPSATPGKAGEEGYGC---------------------------------------SLLWRILSDKFPHYINQGLEDTQVQVPNGKFPTIGFKKENPNESRSNYRRAEQGIRIRGS 1862          
BLAST of mRNA_P-lacustris_contig910.15570.1 vs. uniprot
Match: D8LHL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHL1_ECTSI)

HSP 1 Score: 177 bits (449), Expect = 1.110e-51
Identity = 123/308 (39.94%), Postives = 138/308 (44.81%), Query Frame = 0
Query:    1 MGVGEINAIIGRADDARRLFVSRSNLFVCGPVIKKPDLGSVLLEMADDEEVEATSDWGKSLPPEGGPTLPPWMPVQVVLFSINVQGHWATLHGNPMVTFARATDEIEDIIQRYGRRRGLEALESAGLRRGRSAVIDQFKPIYIDEERERXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSPSXXXXXXXXXXTKTMMDVEGSAGGEGGGHLLSPNSNGNGFVGHGNGNAVGGESASAGGGEXXXXXDEGTLLWRILSQKFPHYINQGLEETQLQVPNGKFPTIGFKKDNPNESRSAYRRAEQGIRIRGS 308
            MG GEINAII +ADDARR FV+RSN +VCGPVIK+P++GSVLLEMAD+EEV+ATSDWGK+ PPEG P  PPWMP+Q    S  V G    L GN                                                                                                           AG EG G                                        +LLWRILS+KFPHYINQGLE+TQ+QVPNGKFPTIGFKK+NPNESRS YRRAEQGIRIRGS
Sbjct:    1 MGTGEINAIIEKADDARRFFVARSNHYVCGPVIKEPNVGSVLLEMADEEEVKATSDWGKTPPPEGEPAPPPWMPIQGEGESHLVSGSNGIL-GNXXXXXXXXXXXXXX--------------------------------------------------------------------------------------XXXXXXXAGEEGYGC---------------------------------------SLLWRILSEKFPHYINQGLEDTQVQVPNGKFPTIGFKKENPNESRSNYRRAEQGIRIRGS 182          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig910.15570.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KU31_9PHAE9.680e-10168.51USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LHL1_ECTSI1.110e-5139.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig910contigP-lacustris_contig910:66551..72389 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig910.15570.1mRNA_P-lacustris_contig910.15570.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig910 15587..73180 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig910.15570.1 ID=prot_P-lacustris_contig910.15570.1|Name=mRNA_P-lacustris_contig910.15570.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=309bp
MGVGEINAIIGRADDARRLFVSRSNLFVCGPVIKKPDLGSVLLEMADDEE
VEATSDWGKSLPPEGGPTLPPWMPVQVVLFSINVQGHWATLHGNPMVTFA
RATDEIEDIIQRYGRRRGLEALESAGLRRGRSAVIDQFKPIYIDEERERE
RREKKRQRERPQDHEQQQQPQQQPQLLQSPSVPPSSPTSPVTKTMMDVEG
SAGGEGGGHLLSPNSNGNGFVGHGNGNAVGGESASAGGGEGGDGGDEGTL
LWRILSQKFPHYINQGLEETQLQVPNGKFPTIGFKKDNPNESRSAYRRAE
QGIRIRGS*
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