prot_P-lacustris_contig91.15566.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig91.15566.1
Unique Nameprot_P-lacustris_contig91.15566.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length690
Homology
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BLAST of mRNA_P-lacustris_contig91.15566.1 vs. uniprot
Match: A0A6H5L3L6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3L6_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 1.460e-10
Identity = 79/175 (45.14%), Postives = 96/175 (54.86%), Query Frame = 0 
Query:  280 LPAP------SKISVERMERKRVQRSDADIAEREDFLRQAASENSAKGPLASLVEKAEAQAVEALEAAG---LLGVKQREAPET--HQGVEQRAVEQGEKER-ATGEGA--------------------GKAVDEAISXXXXXXESKKDLEGEAVN-EGGPAESKDKASEDRKAE 421
            LPAP      +K SVERMER+    + A  AERE+ LR+ ASEN+A GPLA++VE+A A+AVEALEAAG   +L   +   PET   QG EQRAV +GE+ER A GE A                    G A+ EAI       E+KK +E      E G  ESK KA    KAE
Sbjct:  668 LPAPPAGLAEAKTSVERMERESTHLTAAQQAEREESLRRTASENAAVGPLAAVVERAHAEAVEALEAAGQATVLAPPRGAPPETTNRQGAEQRAVGEGEEERTAVGEKAPPVXXXXXXXXXXXXXXVKSGMAIFEAIKNRAIE-EAKKAVEAAPPGRERGRTESKGKAQSSEKAE 841
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BLAST of mRNA_P-lacustris_contig91.15566.1 vs. uniprot
Match: D7G214_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G214_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 1.980e-9
Identity = 52/95 (54.74%), Postives = 67/95 (70.53%), Query Frame = 0 
Query:  281 PAPSKISVERMERKRVQRSDADIAEREDFLRQAASENSAKGPLASLVEKAEAQAVEALEAAG---LLGVKQREAPETHQG--VEQRAVEQGEKER 370
            PA +K SVERMER+    + A  AERE+ LR+ ASEN+A GPLA++VE+A+A+A EALEAAG   +L   +   PET  G   EQRAV +GE+ER
Sbjct:  329 PAEAKTSVERMERESTHLTAAQQAEREESLRRTASENAAVGPLAAVVERAQAEAAEALEAAGQATVLAPPRGAPPETTTGQETEQRAVGEGEEER 423
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig91.15566.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L3L6_9PHAE1.460e-1045.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G214_ECTSI1.980e-954.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 436..536
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..689
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig91contigP-lacustris_contig91:239696..241765 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig91.15566.1mRNA_P-lacustris_contig91.15566.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig91 239223..260353 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig91.15566.1 ID=prot_P-lacustris_contig91.15566.1|Name=mRNA_P-lacustris_contig91.15566.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=690bp
MAVTITKTEPSTARGPLSAALPALASALATVARGSGFVKEIQNALEGELD
LDWNVKEGVDWEDVRARAEDGDRVIITWEDEEESAAADADASADAEGEAG
GRLISTSDKEEESADADANADGGRPGGGGGGGGLTEMAPGKESNRYGLGR
NQDSRRKGREGKTKKEFLHGVKKSEEHDPTITAPEQGRVDAGVVRDDSRD
HEGENRWERVDGADLGPNAPALKGFGDQSPEDPGNETSSAAARLSQEEDG
NQDENEDEKRRDTADAADSGGGGGAADGKLPAPSKISVERMERKRVQRSD
ADIAEREDFLRQAASENSAKGPLASLVEKAEAQAVEALEAAGLLGVKQRE
APETHQGVEQRAVEQGEKERATGEGAGKAVDEAISKRAAGEESKKDLEGE
AVNEGGPAESKDKASEDRKAEEELVRKGEAGKQARREAEREEDAEYEARV
KDAEQRLNREAAEKKRAEMEEAERQARREEAEREEAQRQARREEAEREEA
QRQARREEAEREGEARKEARRKTEEEEAERQARSKEADRGKKGASEQDND
IDIEMALEEMVMGKSRGKGPQAKQQPAAAHQRDRQQRSRGDDDDDDDGGG
VQRSFVVPDRGNRGRGNGRGRSSSERGGGRMRSSTGDDDDDDDSSTGPPT
SSTSTGKRPQGVAISSEEMSKRDQEALKFIGRRQPQRVA*
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