prot_P-lacustris_contig91.15554.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig91.15554.1
Unique Nameprot_P-lacustris_contig91.15554.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length379
Homology
BLAST of mRNA_P-lacustris_contig91.15554.1 vs. uniprot
Match: A0A6H5LC46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC46_9PHAE)

HSP 1 Score: 242 bits (617), Expect = 1.970e-70
Identity = 216/338 (63.91%), Postives = 232/338 (68.64%), Query Frame = 0
Query:    1 MLAASSSGRSGPXXXXXXXXXXXXXX----GGKWRPSFGSGSGGGARGGVQS-PPGAMHAPWAAFSTPARDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GPLGRLLQQVRTRCDGDEARLLSGEFPFRQVSITPIASRGNDDRNDAPGGVSGGGASGGKSRRDYGDPRTRCSVALDTTVVLPA-TPREVTAAAGFGAALWGSGKGNSYDQGGXXXXXASGLVRLSCMVHRVLDMSTSSSSXXXXSRLSPAATPSGANANVGLVDSEGCATSFERLRSLEGIRVDALFKQDTRRAVDVCPGSQLRIYDPCCVWYDAEVGRRRRARGGKSVA 330
            M A SS GRS P  XXXXXXXXXXXX    GGKWRPSFGS   GGARGG QS   GA HAP AAFSTPARDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  GPLGRLLQQVR RCDGDEARLLSGEFPFRQ S    ++ G ++ +   G       SG KSRRDYGDPRTRCSVALD TV+LPA TPR   ++ GF   LWG G+GN   Q G     ASGLV  SC VH V+D+S              A + +G  A    V     AT F  L  LEG+RVD LFKQDTRRAVDV PGSQLRIYDP CVWYDAEVG      GG++ A
Sbjct:  280 MFAPSSFGRSAPTSXXXXXXXXXXXXXXXXGGKWRPSFGSA--GGARGGGQSLAAGATHAPRAAFSTPARDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGPLGRLLQQVRARCDGDEARLLSGEFPFRQPSSASKSTTGGNNNSHLDGVGVXXXXSGAKSRRDYGDPRTRCSVALDATVMLPAATPRG--SSVGFEGGLWGGGEGNELGQAGRGG--ASGLVWFSCFVHHVVDVSLGLGGNRVRPGSRCATSAAGDAAGWSSV-----ATDFGCLHRLEGVRVDGLFKQDTRRAVDVGPGSQLRIYDPSCVWYDAEVG----GEGGRAEA 602          
BLAST of mRNA_P-lacustris_contig91.15554.1 vs. uniprot
Match: D7FXF5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXF5_ECTSI)

HSP 1 Score: 246 bits (627), Expect = 3.720e-69
Identity = 204/328 (62.20%), Postives = 218/328 (66.46%), Query Frame = 0
Query:    1 MLAASSSGRSGPXXXXXXXXXXXXXX-GGKWRPSFGSGSGGGARGGVQSPP-GAMHAPWAAFSTPARDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----GPLGRLLQQVRTRCDGDEARLLSGEFPFRQVSITPIASRGNDDRNDAPGGVSGGGAS----GGKSRRDYGDPRTRCSVALDTTVVLPA-TPREVTAAAGFGAALWGSGKGNSYDQGGXXXXXASGLVRLSCMVHRVLDMSTSSSSXXXXSRLSPAATPSGANANVGLVDS-EGCATSFERLRSLEGIRVDALFKQDTRRAVDVCPGSQLRIYDPCCVWYDAE 316
            M A S+ GRSGP               GGKWRPSFGS SG  ARGG QSP  GAMHAP AAFSTPARD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    GPLGRLLQQVR RCDGDEARLLSGEFPFRQ S    AS+         G +   G      GGKSRRD GDPRTRC VALD TV+LPA TPR  +   GF   LWG G+GN   Q G      +GLVR SC VH V+D+S S       SR+SP +      + VG      G AT F RL  LEG+RVD +FKQDTRRAVDV PGSQLRIYDPCCVWYDAE
Sbjct:  916 MFAPSTFGRSGPTASSAAAASTSASTTGGKWRPSFGSASG--ARGGGQSPAAGAMHAPRAAFSTPARDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGPLGRLLQQVRARCDGDEARLLSGEFPFRQPSS---ASKATTSXXXXXGHLDDVGVGXXXXGGKSRRDPGDPRTRCRVALDATVMLPAATPRGPSV--GFEGGLWGGGEGNELGQAGGGG--VTGLVRFSCFVHHVVDVSLS----LGGSRVSPGSRR--VTSAVGYAAGPSGVATDFGRLHRLEGVRVDGIFKQDTRRAVDVGPGSQLRIYDPCCVWYDAE 1228          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig91.15554.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LC46_9PHAE1.970e-7063.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXF5_ECTSI3.720e-6962.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 334..356
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..333
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 357..378
NoneNo IPR availableTMHMMTMhelixcoord: 334..356

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig91contigP-lacustris_contig91:112755..114372 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig91.15554.1mRNA_P-lacustris_contig91.15554.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig91 112494..117476 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig91.15554.1 ID=prot_P-lacustris_contig91.15554.1|Name=mRNA_P-lacustris_contig91.15554.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=379bp
MLAASSSGRSGPSSSAAAVAASTSTTGGKWRPSFGSGSGGGARGGVQSPP
GAMHAPWAAFSTPARDRDRDGSGMAPSGSMGMGAVGSASARRRRGSGAGS
GPLGRLLQQVRTRCDGDEARLLSGEFPFRQVSITPIASRGNDDRNDAPGG
VSGGGASGGKSRRDYGDPRTRCSVALDTTVVLPATPREVTAAAGFGAALW
GSGKGNSYDQGGGGGGGASGLVRLSCMVHRVLDMSTSSSSSNSSSRLSPA
ATPSGANANVGLVDSEGCATSFERLRSLEGIRVDALFKQDTRRAVDVCPG
SQLRIYDPCCVWYDAEVGRRRRARGGKSVADVHAVVRAIPILFAVSAAAV
VAGWILSRRGWGMPWRWWRRLPAARCTS*
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