prot_P-lacustris_contig905.15527.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig905.15527.1
Unique Nameprot_P-lacustris_contig905.15527.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length203
Homology
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BLAST of mRNA_P-lacustris_contig905.15527.1 vs. uniprot
Match: A0A6H5KLK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLK1_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 1.400e-12
Identity = 61/151 (40.40%), Postives = 80/151 (52.98%), Query Frame = 0 
Query:    1 MLRARCCLVALVFSLDAFDARRRLASS-----MHSRCSISPASLGQVRRAAANTEQASPFSPLASSYCREREGTVGCAGGMRRGWCTSSFVF---PRSSTWRRRRYRLSLRSYLLRHRLTSPP--KARVACRSGWSGSRPRRCGAVVSMKK 141
            M  +RCCL+  +  L   D +R  A+S     ++SR       L  +  A ANT +      L SS  R+R G VGCAGG+R  WC +SFV    P+++  R R    S     +R   +  P  +ARVA RSGWSG+RPRR GA VSM K
Sbjct:    1 MFVSRCCLLIALVVLSXXDPQRVAATSAAAGCLNSRSLTRRLMLLPLATATANTPELQDS--LVSSNRRKRGGAVGCAGGIRSRWCVASFVLRCRPKATCSRTRTSARSGCCCSIRPPTSQRPYAQARVAWRSGWSGARPRRRGAAVSMGK 149
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig905.15527.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KLK1_9PHAE1.400e-1240.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..202
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.475

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig905contigP-lacustris_contig905:73155..74606 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig905.15527.1mRNA_P-lacustris_contig905.15527.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig905 73101..79866 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig905.15527.1 ID=prot_P-lacustris_contig905.15527.1|Name=mRNA_P-lacustris_contig905.15527.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=203bp
MLRARCCLVALVFSLDAFDARRRLASSMHSRCSISPASLGQVRRAAANTE
QASPFSPLASSYCREREGTVGCAGGMRRGWCTSSFVFPRSSTWRRRRYRL
SLRSYLLRHRLTSPPKARVACRSGWSGSRPRRCGAVVSMKKREEEGVEMV
LLCHRPGSLLTASSAAACTGGQRFRSGDTKRSSSRVCHGRDGFRAAVPPI
EA*
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