prot_P-lacustris_contig905.15523.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig905.15523.1
Unique Nameprot_P-lacustris_contig905.15523.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length308
Homology
BLAST of mRNA_P-lacustris_contig905.15523.1 vs. uniprot
Match: D7FRT4_ECTSI (Nsp1_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT4_ECTSI)

HSP 1 Score: 285 bits (728), Expect = 2.820e-91
Identity = 159/180 (88.33%), Postives = 168/180 (93.33%), Query Frame = 0
Query:  116 GAPKPGTDAAAGTAAGSALSLAAAGGAGNAEQGQPPEKFMSMTVEEIVNSWNVELEQDATTFTNEAVKVAGWDMILRETQSELFSLADDVQKLVLGQQDLARSMKAIEGEQSLLDKTLDQLEGQAEKLMHDQRGQSPEEGDVEREQAFQIAQTVDMQLAGMVDTLKSLVDQVNSSTASSS 295
            GA K GTDAA G+AA   L+LAAAGGAG  EQ QPPE++M+MTVEEIVNSWNVEL+QDATTFTNEAVKV+ WD +LRETQSELFSLADDVQKLVLGQQDLARSMKAIEGEQS LDKTLDQLEGQAEKLMHDQRGQSPEEGDVEREQAFQIAQTVDMQLAGMVDTLKSLVDQVNSST+SSS
Sbjct:  123 GAAKDGTDAANGSAAAGTLTLAAAGGAGTTEQEQPPEQYMNMTVEEIVNSWNVELDQDATTFTNEAVKVSDWDGVLRETQSELFSLADDVQKLVLGQQDLARSMKAIEGEQSHLDKTLDQLEGQAEKLMHDQRGQSPEEGDVEREQAFQIAQTVDMQLAGMVDTLKSLVDQVNSSTSSSS 302          
BLAST of mRNA_P-lacustris_contig905.15523.1 vs. uniprot
Match: A0A6H5JT70_9PHAE (Nsp1_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT70_9PHAE)

HSP 1 Score: 242 bits (618), Expect = 6.920e-73
Identity = 135/148 (91.22%), Postives = 141/148 (95.27%), Query Frame = 0
Query:  156 SMTVEEIVNSWNVELEQDATTFTNEAVKVAGWDMILRETQSELFSLADDVQKLVLGQQDLARSMKAIEGEQSLLDKTLDQLEGQAEKLMHDQRGQSPEEGDVEREQAFQIAQTVDMQLAGMVDTLKSLVDQVNSSTASSSAFGGGVGG 303
            +MTVEEIVNSWNVEL+QDATTFTNEAVKV+ WD++LRETQSELFSLADDVQKLVLGQQDLARSMKAIEGEQS LDKTLDQLEGQAEKLM DQRGQSPEEGDVEREQAFQIAQTVDMQLAGMVDTLKSLVDQVNSST+SSS   G VGG
Sbjct:  319 TMTVEEIVNSWNVELDQDATTFTNEAVKVSDWDVVLRETQSELFSLADDVQKLVLGQQDLARSMKAIEGEQSHLDKTLDQLEGQAEKLMRDQRGQSPEEGDVEREQAFQIAQTVDMQLAGMVDTLKSLVDQVNSSTSSSSI--GAVGG 464          
BLAST of mRNA_P-lacustris_contig905.15523.1 vs. uniprot
Match: A0A7S3XTG9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTG9_HETAK)

HSP 1 Score: 106 bits (265), Expect = 4.590e-24
Identity = 54/139 (38.85%), Postives = 87/139 (62.59%), Query Frame = 0
Query:  151 PEKFMSMTVEEIVNSWNVELEQDATTFTNEAVKVAGWDMILRETQSELFSLADDVQKLVLGQQDLARSMKAIEGEQSLLDKTLDQLEGQAEKLMHDQRGQSPEEGDVEREQAFQIAQTVDMQLAGMVDTLKSLVDQVNS 289
            P ++ + TV+EI+  W V LEQD   F  +A +VA WD  LRE Q  L S +D V +L+LGQ +L R++  ++  Q  L+ TL  LE Q ++       ++P++ D+ERE+A+Q+A   D +L G++D L++L D +N+
Sbjct:    6 PAEYQAKTVDEILGDWGVRLEQDVAAFARQAARVAAWDQALREHQEALGSASDRVHRLLLGQAELDRTLDTVQAYQGELEATLGALEAQVDEQFRRCAARAPDDADLERERAYQLAVATDQRLGGVLDGLRALADDINA 144          
BLAST of mRNA_P-lacustris_contig905.15523.1 vs. uniprot
Match: A0A8K1CMM0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMM0_PYTOL)

HSP 1 Score: 107 bits (266), Expect = 2.570e-22
Identity = 60/140 (42.86%), Postives = 91/140 (65.00%), Query Frame = 0
Query:  149 QPPEKFMSMTVEEIVNSWNVELEQDATTFTNEAVKVAGWDMILRETQSELFSLADDVQKLVLGQQDLARSMKAIEGEQSLLDKTLDQLEGQAEKLMHDQRGQSPEEGDVEREQAFQIAQTVDMQLAGMVDTLKSLVDQVN 288
            QPP  +M  T+EEI+N W+ +LE++A TFTNEAVKV+ WD  L ++Q +L  LA DV+++ + Q++L  ++  I   Q  L  TL+QLE   +K M++ + Q P   D+EREQ  Q +  +D QL  M+ TLK  V+++N
Sbjct:  322 QPPADYMGKTIEEIINMWSEQLERNADTFTNEAVKVSQWDGELMDSQKKLGELASDVRRIQVAQKELDTNLDTIFAYQMELKSTLEQLENSVDK-MYESQDQMPVAADIEREQMLQTSVDIDDQLNAMMTTLKETVEKLN 460          
BLAST of mRNA_P-lacustris_contig905.15523.1 vs. uniprot
Match: A0A7S4MN52_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MN52_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 4.500e-19
Identity = 57/155 (36.77%), Postives = 97/155 (62.58%), Query Frame = 0
Query:  137 AAAG--GAGNAEQGQPPEKFMSMTVEEIVNSWNVELEQDATTFTNEAVKVAGWDMILRETQSELFSLADDVQKLVLGQQDLARSMKAIEGEQSLLDKTLDQLEGQAEKLMHDQRGQSPEEGDVEREQAFQIAQTVDMQLAGMVDTLKSLVDQVNS 289
            AAAG  GA  A  G PP  + S+TVE+I+NS+   L++DA  F  EA +VA +D +LR++Q  + +L  +V +L++ Q +L R++  + G Q  L  TL+ LEG  ++L   Q   +PE+ DVERE+A+ +A  ++ +L  M   ++S+ +++ +
Sbjct:    1 AAAGTPGAAAAANGPPPLAYQSLTVEQILNSFQSHLDRDARVFLQEAQRVARYDAVLRDSQRSISALTGEVHRLMIRQGELDRTLNGVGGYQRQLGDTLEGLEGHIDELFASQSHLTPEDADVERERAYALAIDLEGRLGSMTRAIESVGNELEA 155          
BLAST of mRNA_P-lacustris_contig905.15523.1 vs. uniprot
Match: K0S5B9_THAOC (Alpha-carbonic anhydrase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S5B9_THAOC)

HSP 1 Score: 90.9 bits (224), Expect = 1.410e-16
Identity = 54/140 (38.57%), Postives = 86/140 (61.43%), Query Frame = 0
Query:  150 PPEKFMSMTVEEIVNSWNVELEQDATTFTNEAVKVAGWDMILRETQSELFSLADDVQKLVLGQQDLARSMKAIEGEQSLLDKTLDQLEGQAEKLMHDQRGQSPEEGDVEREQAFQIAQTVDMQLAGMVDTLKSLVDQVNS 289
            PP ++ S+TVE+I+N +  ELE D   F +EA ++A +D  LR+TQ  L  L + V +L+L Q ++   ++ I   Q+ L  TLDQLE   ++L   Q   + E+ DVERE+++Q A  VD +L  M   L+++V+ +NS
Sbjct:  349 PPIEYQSLTVEQILNRFQSELETDTVAFLHEAQRIANYDATLRDTQHALSELTNQVSRLMLHQNEVDTQLRGIGSYQNELSTTLDQLERNVDELFAAQSNITIEDADVEREKSYQRALEVDDKLTQMTGKLEAVVNDLNS 488          
BLAST of mRNA_P-lacustris_contig905.15523.1 vs. uniprot
Match: K3WPB9_GLOUD (Nsp1_C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPB9_GLOUD)

HSP 1 Score: 85.5 bits (210), Expect = 1.780e-16
Identity = 50/123 (40.65%), Postives = 78/123 (63.41%), Query Frame = 0
Query:  166 WNVELEQDATTFTNEAVKVAGWDMILRETQSELFSLADDVQKLVLGQQDLARSMKAIEGEQSLLDKTLDQLEGQAEKLMHDQRGQSPEEGDVEREQAFQIAQTVDMQLAGMVDTLKSLVDQVN 288
            W+ +LE++A TFTNEAVKV+ WD  L E+Q +L  +A DV+++ + Q++L  ++  I   Q  L  TL+QLE   +K M++ +   P   D+EREQ  Q++  +D QL  M  TLK  V+++N
Sbjct:    2 WSEQLEKNADTFTNEAVKVSMWDSELMESQKKLGDIASDVRRIQVAQKELDTNLDTIFAYQMELKSTLEQLENSVDK-MYEAQDHMPIAADIEREQTLQLSVDIDEQLNSMSTTLKETVEKLN 123          
BLAST of mRNA_P-lacustris_contig905.15523.1 vs. uniprot
Match: B8C2B6_THAPS (Nsp1_C domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2B6_THAPS)

HSP 1 Score: 86.7 bits (213), Expect = 2.410e-15
Identity = 51/140 (36.43%), Postives = 86/140 (61.43%), Query Frame = 0
Query:  150 PPEKFMSMTVEEIVNSWNVELEQDATTFTNEAVKVAGWDMILRETQSELFSLADDVQKLVLGQQDLARSMKAIEGEQSLLDKTLDQLEGQAEKLMHDQRGQSPEEGDVEREQAFQIAQTVDMQLAGMVDTLKSLVDQVNS 289
            PP ++ S+T+E+I+N +  ELE D  +F  EA +++ +D  LR+TQ  L  L + V +L+L Q ++   ++ I   Q  L  TLDQLE   ++L   Q G S ++ D+ERE+A++ A  VD +L  M + L+++V  +N+
Sbjct:  274 PPIEYQSLTIEQILNRFQSELETDTISFLQEAQRISQYDATLRDTQHSLSELTNMVSRLMLHQSEVDTQLQGIGSYQRELGTTLDQLERNVDELFAAQSGISIQDADIEREKAYERALEVDYKLEQMGNVLENVVSDLNA 413          
BLAST of mRNA_P-lacustris_contig905.15523.1 vs. uniprot
Match: A0A448ZLG7_9STRA (Nsp1_C domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZLG7_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 8.790e-15
Identity = 50/152 (32.89%), Postives = 92/152 (60.53%), Query Frame = 0
Query:  149 QPPE-KFMSMTVEEIVNSWNVELEQDATTFTNEAVKVAGWDMILRETQSELFSLADDVQKLVLGQQDLARSMKAIEGEQSLLDKTLDQLEGQAEKLMHDQRGQSPEEGDVEREQAFQIAQTVDMQLAGMVDTLKSLVDQVNSSTASSSAFGG 299
            +PP  ++ ++TVEEI+N +  +LE+DA  F  EA +V  +D +LR++Q +L  L  + Q+L++ Q+ + R +  I   Q+ L+ TL+ +E Q + +   Q   +P + D ERE+A++ A+ ++ +L    +TL+   + +N + A   AFGG
Sbjct:  301 EPPALEYQTLTVEEILNKFQKQLEEDALAFCEEAKRVCEFDAVLRDSQRDLAKLTTEAQRLMIEQEQVERGLDGIGAFQNELETTLEAVEEQVDAIFRSQAHLTPLDADAERERAYETAKQIEYRLDHSTETLRETFETLNHANAR--AFGG 450          
BLAST of mRNA_P-lacustris_contig905.15523.1 vs. uniprot
Match: A0A7S4RH16_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RH16_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 2.490e-14
Identity = 49/150 (32.67%), Postives = 89/150 (59.33%), Query Frame = 0
Query:  153 KFMSMTVEEIVNSWNVELEQDATTFTNEAVKVAGWDMILRETQSELFSLADDVQKLVLGQQDLARSMKAIEGEQSLLDKTLDQLEGQAEKLMHDQRGQSPEEGDVEREQAFQIAQTVDMQLAGMVDTLKSLVDQVNSSTASSSAFGGGVG 302
            ++ ++T+E+I+N++  EL++DA  F  E  ++A +D +LR+TQ  L SL   V +L+L Q +L  +  +I   Q+ +  +LD LE   ++L       +PE+ DVERE+++  A  V+ +L G+++ L+  V  +N+S     + G G G
Sbjct:  266 QYQTLTIEQILNTFQSELDKDAHNFLTECRRIASYDAVLRDTQRSLSSLTQTVYRLLLRQGELDSTFNSIGAYQNEVSNSLDGLEVMVDELFAHAGNMNPEDADVERERSYVRAMEVEQKLGGLMNGLEDCVSDLNASQERMISIGSGKG 415          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig905.15523.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRT4_ECTSI2.820e-9188.33Nsp1_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JT70_9PHAE6.920e-7391.22Nsp1_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7S3XTG9_HETAK4.590e-2438.85Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8K1CMM0_PYTOL2.570e-2242.86Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S4MN52_9STRA4.500e-1936.77Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
K0S5B9_THAOC1.410e-1638.57Alpha-carbonic anhydrase domain-containing protein... [more]
K3WPB9_GLOUD1.780e-1640.65Nsp1_C domain-containing protein n=1 Tax=Globispor... [more]
B8C2B6_THAPS2.410e-1536.43Nsp1_C domain-containing protein n=1 Tax=Thalassio... [more]
A0A448ZLG7_9STRA8.790e-1532.89Nsp1_C domain-containing protein n=1 Tax=Pseudo-ni... [more]
A0A7S4RH16_9STRA2.490e-1432.67Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007758Nucleoporin, NSP1-like, C-terminalPFAMPF05064Nsp1_Ccoord: 154..251
e-value: 2.8E-15
score: 56.1
NoneNo IPR availableGENE3D1.20.5.170coord: 186..245
e-value: 5.4E-6
score: 28.2
NoneNo IPR availablePANTHERPTHR12084:SF0NUCLEOPORIN 62-LIKEcoord: 7..294
IPR026010Nucleoporin NSP1/NUP62PANTHERPTHR12084NUCLEAR PORE GLYCOPROTEIN P62-RELATEDcoord: 7..294

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig905contigP-lacustris_contig905:19672..25322 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig905.15523.1mRNA_P-lacustris_contig905.15523.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig905 19524..25322 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig905.15523.1 ID=prot_P-lacustris_contig905.15523.1|Name=mRNA_P-lacustris_contig905.15523.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=308bp
MSFNFSAGGAAPKPGGGGFSFGSSAAPAPAAPAAPFSFSMTPAAAAPAAA
AAAPDRRFLLRPRQHLQLLLAGFRSQQARRRLLRRLRRHQQQQPLLLPPQ
EEVFGGSAGGALAVAGAPKPGTDAAAGTAAGSALSLAAAGGAGNAEQGQP
PEKFMSMTVEEIVNSWNVELEQDATTFTNEAVKVAGWDMILRETQSELFS
LADDVQKLVLGQQDLARSMKAIEGEQSLLDKTLDQLEGQAEKLMHDQRGQ
SPEEGDVEREQAFQIAQTVDMQLAGMVDTLKSLVDQVNSSTASSSAFGGG
VGGGRQG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007758Nucleoporin_NSP1_C
IPR026010NSP1/NUP62