prot_P-lacustris_contig904.15520.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-lacustris_contig904.15520.1
Unique Name	prot_P-lacustris_contig904.15520.1
Type	polypeptide
Organism	Pleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length	285

Homology

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BLAST of mRNA_P-lacustris_contig904.15520.1 vs. uniprot
Match: A0A6H5JPI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPI8_9PHAE)

HSP 1 Score: 409 bits (1051), Expect = 5.760e-137
Identity = 201/276 (72.83%), Postives = 227/276 (82.25%), Query Frame = 0

Query:    1 MAFIIPTSPDNVAFKIALSVLLLSVVLHPIVRWCFHSIRANVAWKSVEKQQPVEITKYNFFSEALGDRGGWDTARAVTFLLAAFHVSTWGLELSLDLAVRADGPVDLLNRPPPVVFRTQAIDATHNVSDWIVLPYDLETSMEGGYLDNFRGTLEDGYATTSYRIGDSIILGKTVFASWSPEPSGIASGLFYDIDNGRAIVSQVGCSTLSRTGALYVSAAERKKWGDATECESGPSLINASLDGRASPPVILLNSSEGDVHDRRRGEQLSELFVLSV 276
            M  IIPTS DNVAF IAL VLLLSVVLHPIVRWCFH IRANVAWKS+EKQ+PVE+TKYN FSEALGDRG WD AR VT LLAAFHVSTWGLELSLDLA+R DGPVDLLNRPPP+VFRTQ +D  HN SDWIV+  + E  +EGG LD+ RGTL DG ATT+YRIG+SII G TVFASWSP+ S IASGLFYDIDNG+AIVS++ CST SRTG+LY++A E  KWGD +ECESGPSL+NAS + RASPPVILLNS+EG+ +     E     F+ SV
Sbjct:    1 MTMIIPTSSDNVAFSIALGVLLLSVVLHPIVRWCFHRIRANVAWKSIEKQRPVEVTKYNIFSEALGDRGRWDMARVVTILLAAFHVSTWGLELSLDLALRTDGPVDLLNRPPPIVFRTQVVDVAHNFSDWIVIRNE-EAIVEGGSLDHIRGTLVDGNATTTYRIGESIIRGNTVFASWSPQSSRIASGLFYDIDNGQAIVSEIACSTPSRTGSLYITAEESSKWGDVSECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSV 275

The following BLAST results are available for this feature:

BLAST of mRNA_P-lacustris_contig904.15520.1 vs. uniprot

BLAST of mRNA_P-lacustris_contig904.15520.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5JPI8_9PHAE	5.760e-137	72.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 36..284
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..35
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	TMHMM	TMhelix		coord: 12..31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-lacustris_contig904	contig	P-lacustris_contig904:62689..63543 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_93	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-lacustris_contig904.15520.1	mRNA_P-lacustris_contig904.15520.1	Pleurocladia lacustris SAG_25_93	mRNA	P-lacustris_contig904 62689..64508 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-lacustris_contig904.15520.1 ID=prot_P-lacustris_contig904.15520.1|Name=mRNA_P-lacustris_contig904.15520.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=285bp
MAFIIPTSPDNVAFKIALSVLLLSVVLHPIVRWCFHSIRANVAWKSVEKQ
QPVEITKYNFFSEALGDRGGWDTARAVTFLLAAFHVSTWGLELSLDLAVR
ADGPVDLLNRPPPVVFRTQAIDATHNVSDWIVLPYDLETSMEGGYLDNFR
GTLEDGYATTSYRIGDSIILGKTVFASWSPEPSGIASGLFYDIDNGRAIV
SQVGCSTLSRTGALYVSAAERKKWGDATECESGPSLINASLDGRASPPVI
LLNSSEGDVHDRRRGEQLSELFVLSVGAERSHAA*