prot_P-lacustris_contig904.15517.1 (polypeptide) Pleurocladia lacustris SAG_25_93
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Overview
Homology
BLAST of mRNA_P-lacustris_contig904.15517.1 vs. uniprot
Match: A0A6H5L203_9PHAE (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L203_9PHAE) HSP 1 Score: 211 bits (536), Expect = 3.340e-68 Identity = 105/119 (88.24%), Postives = 109/119 (91.60%), Query Frame = 0
Query: 5 EGSGTRFEMELELMNSLASPEYLHYLAQSGYLDDRAFLRFLEYLQYFKRPQYAKFITYPHSLAMLELLVNNPPFRKEIAHVSFRDFVHQQQFLHWQFGKKAAPXXXX--SAPVSAPAQV 121
EGSGTRFEMELELMN LASPEYLHYLAQSGYLDDRAF+RFLEYLQYFKRP+YAKFITYPHSLAML+LL+NNPPFRKEIAHVSFRDFVHQQQFLHWQFGK AAP SAP SAPA V
Sbjct: 2 EGSGTRFEMELELMNCLASPEYLHYLAQSGYLDDRAFVRFLEYLQYFKRPEYAKFITYPHSLAMLDLLINNPPFRKEIAHVSFRDFVHQQQFLHWQFGKTAAPPRPPAASAPASAPASV 120
BLAST of mRNA_P-lacustris_contig904.15517.1 vs. uniprot
Match: D7FV80_ECTSI (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV80_ECTSI) HSP 1 Score: 147 bits (371), Expect = 3.130e-43 Identity = 70/76 (92.11%), Postives = 74/76 (97.37%), Query Frame = 0
Query: 5 EGSGTRFEMELELMNSLASPEYLHYLAQSGYLDDRAFLRFLEYLQYFKRPQYAKFITYPHSLAMLELLVNNPPFRK 80
EGSGTRFEMELELMN LASPEYLHYLAQ GYLDDRAF+RFLEYLQYFKRP+YAKFITYPHSLAML+LL+NNPPFRK
Sbjct: 2 EGSGTRFEMELELMNCLASPEYLHYLAQGGYLDDRAFIRFLEYLQYFKRPEYAKFITYPHSLAMLDLLINNPPFRK 77
BLAST of mRNA_P-lacustris_contig904.15517.1 vs. uniprot
Match: A0A835Z5G5_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G5_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.300e-35 Identity = 59/95 (62.11%), Postives = 74/95 (77.89%), Query Frame = 0
Query: 10 RFEMELELMNSLASPEYLHYLAQSGYLDDRAFLRFLEYLQYFKRPQYAKFITYPHSLAMLELLVNNPPFRKEIAHVSFRDFVHQQQFLHWQFGKK 104
RFE+ELE + LASPEYLH+LAQ Y DD AF+ FL+YL Y++RPQYAK++ YPH LAML+ L+N+ FR E+ SFRDFVHQQQF HWQ ++
Sbjct: 25 RFEVELEFVQCLASPEYLHFLAQQRYFDDPAFMAFLQYLTYWRRPQYAKYLMYPHCLAMLDALLNSKRFRSELLMESFRDFVHQQQFFHWQHKRR 119
BLAST of mRNA_P-lacustris_contig904.15517.1 vs. uniprot
Match: A0A7S3XZ41_HETAK (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ41_HETAK) HSP 1 Score: 125 bits (314), Expect = 6.600e-34 Identity = 58/96 (60.42%), Postives = 75/96 (78.12%), Query Frame = 0
Query: 5 EGSGTRFEMELELMNSLASPEYLHYLAQSGYLDDRAFLRFLEYLQYFKRPQYAKFITYPHSLAMLELLVNNPPFRKEIAHVSFRDFVHQQQFLHWQ 100
+G +RFE+ELE + L+SPEYLHYLAQ+ Y +D AF+ FL YLQY++RP+YAKFI YPH LA +E+L + FRKE+A F++FVHQQQF HWQ
Sbjct: 41 DGGHSRFEVELEFVQCLSSPEYLHYLAQNKYFEDPAFINFLHYLQYWRRPEYAKFIIYPHCLAFMEML-EDEAFRKELAKPGFKEFVHQQQFFHWQ 135
BLAST of mRNA_P-lacustris_contig904.15517.1 vs. uniprot
Match: A0A6U6IBL1_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6IBL1_9STRA) HSP 1 Score: 125 bits (313), Expect = 7.220e-34 Identity = 58/92 (63.04%), Postives = 73/92 (79.35%), Query Frame = 0
Query: 10 RFEMELELMNSLASPEYLHYLAQSGYLDDRAFLRFLEYLQYFKRPQYAKFITYPHSLAMLELLVNNPPFRKEIAHVSFRDFVHQQQFLHWQF 101
RFE+ELE + LASP YLH+LA SG L D +FL FLEYL+Y+ RP+YA+FITYPH L L+LL N FR+E+A+V+FR+FVH+QQF WQF
Sbjct: 33 RFELELEFVQCLASPAYLHHLATSGLLSDSSFLSFLEYLRYWSRPEYARFITYPHCLYFLDLLTTNETFRREMANVAFRNFVHEQQFYSWQF 124
BLAST of mRNA_P-lacustris_contig904.15517.1 vs. uniprot
Match: A0A7S2XM67_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XM67_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.290e-33 Identity = 55/92 (59.78%), Postives = 74/92 (80.43%), Query Frame = 0
Query: 10 RFEMELELMNSLASPEYLHYLAQSGYLDDRAFLRFLEYLQYFKRPQYAKFITYPHSLAMLELLVNNPPFRKEIAHVSFRDFVHQQQFLHWQF 101
RFE+ELE + SLASP Y+H+LA SG L +F+ FL YLQY+KRP+YAK+I+YPH L+LL++N PFR+E+A+V FR+FVH+QQF WQ+
Sbjct: 28 RFELELEFLQSLASPAYVHHLATSGILQSPSFIAFLRYLQYWKRPEYAKYISYPHCFFFLDLLIHNEPFRREMANVGFRNFVHEQQFYSWQY 119
BLAST of mRNA_P-lacustris_contig904.15517.1 vs. uniprot
Match: A0A7S3QJ33_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJ33_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.530e-30 Identity = 55/93 (59.14%), Postives = 71/93 (76.34%), Query Frame = 0
Query: 10 RFEMELELMNSLASPEYLHYLAQSGYLDDRAFLRFLEYLQ-YFKRPQYAKFITYPHSLAMLELLVNNPPFRKEIAHVSFRDFVHQQQFLHWQF 101
RFE+ELE + SLASP YLH+LA GY D AFL +L YL+ Y+ RP+YAK+ITYPH L L+L + FRKEI+ V FR+FVH+QQF++WQ+
Sbjct: 77 RFELELEFVQSLASPAYLHHLATQGYFQDEAFLTYLRYLRSYWTRPEYAKYITYPHCLFFLDLAIEKEAFRKEISQVGFRNFVHEQQFMNWQY 169
BLAST of mRNA_P-lacustris_contig904.15517.1 vs. uniprot
Match: A0A7S2EVA4_TRICV (Mediator of RNA polymerase II transcription subunit 31 (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EVA4_TRICV) HSP 1 Score: 112 bits (279), Expect = 8.650e-29 Identity = 51/91 (56.04%), Postives = 69/91 (75.82%), Query Frame = 0
Query: 10 RFEMELELMNSLASPEYLHYLAQSGYLDDRAFLRFLEYLQYFKRPQYAKFITYPHSLAMLELLVNNPPFRKEIAHVSFRDFVHQQQFLHWQ 100
RFE+ELE + LASP Y+H+LA SG L D +FL FL YL+Y+ P+YA+F+ YPH L L+LL + FR+E+A+V+FR+FVH+QQF WQ
Sbjct: 39 RFELELEFVQCLASPAYMHHLATSGLLSDPSFLSFLRYLRYWSHPEYARFLVYPHCLYFLDLLCESEGFRREMANVAFRNFVHEQQFYGWQ 129
BLAST of mRNA_P-lacustris_contig904.15517.1 vs. uniprot
Match: A0A176VRV6_MARPO (Mediator of RNA polymerase II transcription subunit 31 n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VRV6_MARPO) HSP 1 Score: 110 bits (274), Expect = 7.220e-28 Identity = 57/125 (45.60%), Postives = 80/125 (64.00%), Query Frame = 0
Query: 1 MMDTEGSGTRFEMELELMNSLASPEYLHYLAQSGYLDDRAFLRFLEYLQYFKRPQYAKFITYPHSLAMLELLVNNPPFRKEIAHVSFRDFVHQQQFLHWQFGKKAAPXXXXSAPV-SAPAQVPPA 124
+ +T+G RFE+ELE + LA+P Y+HYLAQ+ Y DD AF+ +L+YLQY++RP+YAKFI YPH+L LELL + FR +AH ++ H+QQF W+ + P+ PA PPA
Sbjct: 13 LKETDGGRQRFELELEFVQCLANPTYIHYLAQNRYFDDEAFVGYLKYLQYWQRPEYAKFIVYPHTLFFLELL-QSAQFRTAMAHPVNKEVAHRQQFYFWKHHRNNRLKHILPRPIPEEPAPPPPA 136
BLAST of mRNA_P-lacustris_contig904.15517.1 vs. uniprot
Match: V4LQB5_EUTSA (Mediator of RNA polymerase II transcription subunit 31 n=2 Tax=Eutrema salsugineum TaxID=72664 RepID=V4LQB5_EUTSA) HSP 1 Score: 107 bits (268), Expect = 1.140e-26 Identity = 50/98 (51.02%), Postives = 70/98 (71.43%), Query Frame = 0
Query: 3 DTEGSGTRFEMELELMNSLASPEYLHYLAQSGYLDDRAFLRFLEYLQYFKRPQYAKFITYPHSLAMLELLVNNPPFRKEIAHVSFRDFVHQQQFLHWQ 100
D +G RF +ELE + LA+P Y+HYLAQ+ Y +D AF+ +L+YLQY++RP+Y KFI YPH L LELL NP FR +AH + ++ H+QQF +W+
Sbjct: 23 DPDGGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELL-QNPNFRSAMAHPANKELAHRQQFYYWK 119 The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig904.15517.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-lacustris_contig904.15517.1 ID=prot_P-lacustris_contig904.15517.1|Name=mRNA_P-lacustris_contig904.15517.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=141bpback to top |