prot_P-lacustris_contig9.15482.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig9.15482.1
Unique Nameprot_P-lacustris_contig9.15482.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length71
Homology
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BLAST of mRNA_P-lacustris_contig9.15482.1 vs. uniprot
Match: A0A6H5K953_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K953_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 1.980e-19
Identity = 47/71 (66.20%), Postives = 54/71 (76.06%), Query Frame = 0 
Query:    1 GYSGAHKALFGSVQLIVFRGVLSSVGTMKHYFSKAALRKHRNEKWGE-TDNDHLDRLRQYVQSSSALNFAA 70
            GY+G+HK LFGSVQLIVFRG+L+SVG M+HY S  ALR    E WG   D   LDRLRQY+Q+SSAL FAA
Sbjct:  463 GYTGSHKGLFGSVQLIVFRGLLASVGAMRHYLSSNALRAQNIEVWGRLNDEGVLDRLRQYLQASSALTFAA 533
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BLAST of mRNA_P-lacustris_contig9.15482.1 vs. uniprot
Match: D7FZ46_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ46_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 7.880e-15
Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 0 
Query:    1 GYSGAHKALFGSVQLIVFRGVLSSVGTMKHYFSKAALRKHRNEKWGETDNDHL-DRLRQYVQSSSALNFAA 70
            GY+GA KALFGSVQLIV RG+L S   MKHY +  AL+K+  E WG    + + DR+ +Y Q+SS+L+FAA
Sbjct:  185 GYTGAQKALFGSVQLIVLRGLLLSTAMMKHYLNSTALKKYNGEIWGHVSPEEVRDRVLEYFQASSSLSFAA 255
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig9.15482.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K953_9PHAE1.980e-1966.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ46_ECTSI7.880e-1554.93Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig9contigP-lacustris_contig9:483884..484313 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig9.15482.1mRNA_P-lacustris_contig9.15482.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig9 483884..484315 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig9.15482.1 ID=prot_P-lacustris_contig9.15482.1|Name=mRNA_P-lacustris_contig9.15482.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=71bp
GYSGAHKALFGSVQLIVFRGVLSSVGTMKHYFSKAALRKHRNEKWGETDN
DHLDRLRQYVQSSSALNFAAH
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