prot_P-lacustris_contig9.15451.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig9.15451.1
Unique Nameprot_P-lacustris_contig9.15451.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length121
Homology
BLAST of mRNA_P-lacustris_contig9.15451.1 vs. uniprot
Match: A0A6H5JHH0_9PHAE (HMG box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHH0_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 4.210e-42
Identity = 80/106 (75.47%), Postives = 92/106 (86.79%), Query Frame = 0
Query:    1 ALNAQSAKAAAKAGPVK-KKRAKKDPNKPKGASSAFMQFSQKERASVKAENPDMKITEISKVLGARWRDMDDNEKAPYQKKADKXXXXXXXEIAAYNAKKASEPVS 105
            A++ +SAKAA+  GPVK KK+AKKDPNKPKGASSAFMQFSQKERA VK ENPDMK+TEISK+LGARWR+MDDN+KAP+QKKADK       E+AAYNAKKA+EP S
Sbjct:    5 AVSKKSAKAASNGGPVKRKKKAKKDPNKPKGASSAFMQFSQKERAVVKEENPDMKVTEISKLLGARWREMDDNDKAPFQKKADKDKARYQKEMAAYNAKKAAEPAS 110          
BLAST of mRNA_P-lacustris_contig9.15451.1 vs. uniprot
Match: D7FLE3_ECTSI (ATHMG (ARABIDOPSIS THALIANA HIGH MOBILITY GROUP) transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLE3_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 2.080e-27
Identity = 54/70 (77.14%), Postives = 60/70 (85.71%), Query Frame = 0
Query:   36 MQFSQKERASVKAENPDMKITEISKVLGARWRDMDDNEKAPYQKKADKXXXXXXXEIAAYNAKKASEPVS 105
            MQFSQKERA VK ENPDMK+TEISKVLGARWR+MDDN+KAP+QKKADK       E+AAYNAKKA+EP S
Sbjct:    1 MQFSQKERAVVKQENPDMKVTEISKVLGARWREMDDNDKAPFQKKADKDKARYQKEMAAYNAKKAAEPAS 70          
BLAST of mRNA_P-lacustris_contig9.15451.1 vs. uniprot
Match: D7FLF8_ECTSI (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF8_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 8.850e-18
Identity = 49/98 (50.00%), Postives = 68/98 (69.39%), Query Frame = 0
Query:   21 AKKDPNKPKGASSAFMQFSQKERASVKAENPDMKITEISKVLGARWRDMDDNEKAPYQKKADKXXXXXXXEIAAYNAKKAS-EPVSEEEEGSAEGSAD 117
            AKKD + PKGA SAFMQFSQ  RA VK +NP++K+TEISKVLG +W  +D+ +K PYQ KAD+       E  AY++KKA+ EP  + +   ++ ++D
Sbjct:  546 AKKDKDAPKGAMSAFMQFSQANRAQVKTDNPELKVTEISKVLGEKWGKLDETQKKPYQDKADEDKARYKRERDAYDSKKAATEPPQQSDSNDSDAASD 643          
BLAST of mRNA_P-lacustris_contig9.15451.1 vs. uniprot
Match: D8Q5A9_SCHCM (HMG box domain-containing protein n=2 Tax=Schizophyllaceae TaxID=5332 RepID=D8Q5A9_SCHCM)

HSP 1 Score: 80.5 bits (197), Expect = 3.380e-17
Identity = 45/91 (49.45%), Postives = 61/91 (67.03%), Query Frame = 0
Query:   19 KRAKKDPNKPKGASSAFMQFSQKERASVKAENPDMKITEISKVLGARWRDMDDNEKAPYQKKADKXXXXXXXEIAAYNAKKASEPVSEEEE 109
            ++AKKDPN PK A SA+M FSQ  R  VKAENPD    E+ K+LGA+W++MD++EK PY  KA K       + AAY+ KK++E    +E+
Sbjct:   22 RKAKKDPNAPKRALSAYMFFSQDWRERVKAENPDASFGELGKILGAKWKEMDEDEKKPYVAKAAKDKERAEADKAAYDEKKSAEASEADED 112          
BLAST of mRNA_P-lacustris_contig9.15451.1 vs. uniprot
Match: A0A0C9XB47_9AGAR (HMG box domain-containing protein n=2 Tax=Laccaria TaxID=29882 RepID=A0A0C9XB47_9AGAR)

HSP 1 Score: 77.4 bits (189), Expect = 5.440e-16
Identity = 47/102 (46.08%), Postives = 63/102 (61.76%), Query Frame = 0
Query:    8 KAAAKAGPVKKKRAKKDPNKPKGASSAFMQFSQKERASVKAENPDMKITEISKVLGARWRDMDDNEKAPYQKKADKXXXXXXXEIAAYNAKKASEPVSEEEE 109
            KAA KA     ++ KKDPNKPK A SA+M FSQ  R  +K ENPD    E+ K+LGA+W+++D+ EK PY ++A K         AAY++ K S    EEE+
Sbjct:   11 KAAEKADKATSRKGKKDPNKPKRALSAYMFFSQDWRDRIKTENPDAGFGEVGKLLGAKWKELDEEEKKPYIEQASKDKTRAEEAKAAYDSNKKSASGDEEED 112          
BLAST of mRNA_P-lacustris_contig9.15451.1 vs. uniprot
Match: A0A5C3MPA5_9AGAM (HMG box domain-containing protein n=2 Tax=Gloeophyllales TaxID=452339 RepID=A0A5C3MPA5_9AGAM)

HSP 1 Score: 76.6 bits (187), Expect = 1.090e-15
Identity = 48/96 (50.00%), Postives = 62/96 (64.58%), Query Frame = 0
Query:    5 QSAKAAAKAGPVKKKRAKKDPNKPKGASSAFMQFSQKERASVKAENPDMKITEISKVLGARWRDMDDNEKAPYQKKADKXXXXXXXEIAAYNAKKA 100
            +S KAA K     + +AKKD N PK A SA+M FSQ  R  +KAENPD    E+ K+LGA+W++MDD+EK PY ++A K       E AAY+ KKA
Sbjct:    7 RSRKAAEKGEKGTRAKAKKDKNAPKRALSAYMFFSQDWRERIKAENPDAGFGEVGKLLGAKWKEMDDSEKKPYVEQAAKDKERAEEEKAAYDNKKA 102          
BLAST of mRNA_P-lacustris_contig9.15451.1 vs. uniprot
Match: A0A165NBF9_9APHY (HMG box domain-containing protein n=2 Tax=Fomitopsidaceae TaxID=1769247 RepID=A0A165NBF9_9APHY)

HSP 1 Score: 75.1 bits (183), Expect = 4.820e-15
Identity = 44/88 (50.00%), Postives = 56/88 (63.64%), Query Frame = 0
Query:   18 KKRAKKDPNKPKGASSAFMQFSQKERASVKAENPDMKITEISKVLGARWRDMDDNEKAPYQKKADKXXXXXXXEIAAYNAKKASEPVS 105
            K +AKKD N PK A SA+M FSQ  R  VKAENPD    EI K+LGA+W+++DD+EK PY ++A +       E A Y+ KK   P S
Sbjct:   22 KAKAKKDKNAPKRALSAYMFFSQDWRERVKAENPDASFGEIGKLLGAKWKELDDSEKKPYIEQAARDKARAEQEKADYDGKKVDSPGS 109          
BLAST of mRNA_P-lacustris_contig9.15451.1 vs. uniprot
Match: M7X9L2_RHOT1 (Nucleosome binding protein (Nhp6a) n=6 Tax=Rhodosporidium toruloides TaxID=5286 RepID=M7X9L2_RHOT1)

HSP 1 Score: 75.5 bits (184), Expect = 5.200e-15
Identity = 39/78 (50.00%), Postives = 54/78 (69.23%), Query Frame = 0
Query:   20 RAKKDPNKPKGASSAFMQFSQKERASVKAENPDMKITEISKVLGARWRDMDDNEKAPYQKKADKXXXXXXXEIAAYNA 97
            RAKKDPN PK   SA+M FSQ +R+ VK ENPD+   EI K+LGA+W+++ ++E+ PY++KA         E AAY+A
Sbjct:   17 RAKKDPNAPKRPLSAYMHFSQDQRSVVKEENPDVTFGEIGKILGAKWKELPEDERKPYEEKASADKSRYEKEKAAYDA 94          
BLAST of mRNA_P-lacustris_contig9.15451.1 vs. uniprot
Match: A0A7S2FX93_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FX93_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 6.020e-15
Identity = 44/106 (41.51%), Postives = 67/106 (63.21%), Query Frame = 0
Query:   12 KAGPVKKKRAKKDPNKPKGASSAFMQFSQKERASVKAENPDMKITEISKVLGARWRDMDDNEKAPYQKKADKXXXXXXXEIAAYNAKKASEPVSEEEEGSAEGSAD 117
            K G  KK +A KDPN PK A++A+  F    R + KAENP + +TE+SKV+GA+W+++   EK+ +++KA         E+AAY  KKA+E    EE+ S++  +D
Sbjct:   49 KKGKGKKGKAAKDPNAPKRATTAYFFFLADTRETAKAENPGLSVTELSKVIGAKWKELTPEEKSKFEEKAKADKERYAEEVAAYKGKKAAEEDPMEEDDSSDAGSD 154          
BLAST of mRNA_P-lacustris_contig9.15451.1 vs. uniprot
Match: A0A165SD32_9AGAM (HMG box domain-containing protein n=1 Tax=Neolentinus lepideus HHB14362 ss-1 TaxID=1314782 RepID=A0A165SD32_9AGAM)

HSP 1 Score: 76.3 bits (186), Expect = 6.070e-15
Identity = 47/92 (51.09%), Postives = 60/92 (65.22%), Query Frame = 0
Query:    8 KAAAKAGPVKKKRAKKDPNKPKGASSAFMQFSQKERASVKAENPDMKITEISKVLGARWRDMDDNEKAPYQKKADKXXXXXXXEIAAYNAKK 99
            KAA KA    + +AKKD N PK A SA+M FSQ  R  +KAENPD    E+ K+LGA+W++MDD+EK PY ++A K       E AAY+ KK
Sbjct:   68 KAAEKAEKSSRGKAKKDKNAPKRALSAYMFFSQDWRERIKAENPDAGFGEVGKLLGAKWKEMDDSEKKPYVEQAAKDKERAEQEKAAYDNKK 159          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig9.15451.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHH0_9PHAE4.210e-4275.47HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
D7FLE3_ECTSI2.080e-2777.14ATHMG (ARABIDOPSIS THALIANA HIGH MOBILITY GROUP) t... [more]
D7FLF8_ECTSI8.850e-1850.00FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sili... [more]
D8Q5A9_SCHCM3.380e-1749.45HMG box domain-containing protein n=2 Tax=Schizoph... [more]
A0A0C9XB47_9AGAR5.440e-1646.08HMG box domain-containing protein n=2 Tax=Laccaria... [more]
A0A5C3MPA5_9AGAM1.090e-1550.00HMG box domain-containing protein n=2 Tax=Gloeophy... [more]
A0A165NBF9_9APHY4.820e-1550.00HMG box domain-containing protein n=2 Tax=Fomitops... [more]
M7X9L2_RHOT15.200e-1550.00Nucleosome binding protein (Nhp6a) n=6 Tax=Rhodosp... [more]
A0A7S2FX93_9STRA6.020e-1541.51Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A165SD32_9AGAM6.070e-1551.09HMG box domain-containing protein n=1 Tax=Neolenti... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 78..98
NoneNo IPR availablePANTHERPTHR13711SWI/SNF-RELATED CHROMATIN BINDING PROTEINcoord: 8..113
NoneNo IPR availablePANTHERPTHR13711:SF302HIGH MOBILITY GROUP PROTEIN DSP1-RELATEDcoord: 8..113
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 27..97
e-value: 1.5E-29
score: 114.1
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 28..96
e-value: 1.5E-24
score: 86.2
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 28..96
score: 20.789
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 11..112
e-value: 3.5E-31
score: 109.4
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 18..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig9contigP-lacustris_contig9:133991..135821 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig9.15451.1mRNA_P-lacustris_contig9.15451.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig9 133991..135821 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig9.15451.1 ID=prot_P-lacustris_contig9.15451.1|Name=mRNA_P-lacustris_contig9.15451.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=121bp
ALNAQSAKAAAKAGPVKKKRAKKDPNKPKGASSAFMQFSQKERASVKAEN
PDMKITEISKVLGARWRDMDDNEKAPYQKKADKDKARYQKEIAAYNAKKA
SEPVSEEEEGSAEGSADESD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009071HMG_box_dom
IPR036910HMG_box_dom_sf