prot_P-lacustris_contig9.15441.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig9.15441.1
Unique Nameprot_P-lacustris_contig9.15441.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length391
Homology
BLAST of mRNA_P-lacustris_contig9.15441.1 vs. uniprot
Match: D7FLF3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLF3_ECTSI)

HSP 1 Score: 552 bits (1422), Expect = 2.850e-195
Identity = 300/360 (83.33%), Postives = 311/360 (86.39%), Query Frame = 0
Query:   32 MRLPFVAGLVLTACTCVPGFLPPPPCQDALSHGTHFARCAGMCSTRGREATATRLYVGGKIFGEDEPTPPPQGQPGLIKPAVKARPKGEDSDGEEDGQEGGAGEKXXXXXXXXX-YDF-DDMAASEEDEKRFAEELARKFPDIGRVKVDKFGTIIGGVNPFEGTDVKLEDQPKPFDDEEDFPEVAGVIAGMDDPADAPWRLEAEKIVRGQVEACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKAVNAALEDREQELFVLGRHELVVATPGAKDILTTAKQFKAYKGFEIIVKAGGPFKNKRELKGKLLERTFDELMIMKRGRKVRIPLALVDEVRLPPAVVEVGDE 389
            MRLP  AGLV+ AC CVPGFL P P  D    GT FARCA   STRGREATATRLYVGGKIFGEDEPTPPPQGQPGLIKPAVK+  K E                XXXXXXXXX YDF DD+AA E+DEKR AEELARKFPDIGRVKVDKFG I+GGVNPFEGTDVKLEDQP P DDE+DFPEVAGVIAGMDDPADAPWRLEAEKIVR QV+ACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIK VNAALE RE+ELFVLGRHELVVATPGAKD+LTT KQFKAYKGFE+IVKAGGPFK KRELKGKLLERTFDELMIMK GRKVRIPLALVDEVRLPPA+VE GDE
Sbjct:    1 MRLPCAAGLVVAACPCVPGFLLPLPTHDVGQQGTLFARCAATRSTRGREATATRLYVGGKIFGEDEPTPPPQGQPGLIKPAVKSNRKEEXXXXXXXXXXXXXXXXXXXXXXXXXKYDFSDDLAAREQDEKRLAEELARKFPDIGRVKVDKFGNIVGGVNPFEGTDVKLEDQPIPDDDEKDFPEVAGVIAGMDDPADAPWRLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAGDE 360          
BLAST of mRNA_P-lacustris_contig9.15441.1 vs. uniprot
Match: A0A836C944_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C944_9STRA)

HSP 1 Score: 272 bits (695), Expect = 5.920e-85
Identity = 154/317 (48.58%), Postives = 206/317 (64.98%), Query Frame = 0
Query:   84 TRLYVGGKIFGEDEPTPPPQGQPGLIKPAVKARPKG-----EDSDGEED-----GQEGGAGEKXXXXXXXXXYDFDDMAASEEDEKRFAEELARKFPDIGRVKVDKFGTIIGGVNPFEGTDVKLE-DQPKPFDDEEDFPEVAGVIAGMDDPADAPWRLEAEKIVRGQVEACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKAVNAALEDREQELFVLGRHELVVATPGAKDILTTAKQFKAYKGFEIIVKAGGPFKNKRELKGKLLERTFDELMIMKRGRKVRIPLALVDEVRLPPAVVEVGDE 389
            TRL+  GKIFGED+          ++ PA +   +       D  G+ED        GGA ++              +   E +E+  A E+ +++PD   V VD  G +IGGV+P+   +  LE  +P      +++PEVAG   GMDDP DAPWR EAE+I+R +VE  GL CYDI+W+FH+LEVTVTR +     EEA YVDSD LM+AI+AVN ALE  E+ L+VLGRHEL++ATPGAKDILTT ++FKA+KGF+++V  G     +RE+ GKL ERTFDEL++M++GRKVRIPLALVDEVRLP A +E G++
Sbjct:   69 TRLHARGKIFGEDDEAEE------VVVPAEEFDDESLDVLTADMGGDEDDPFIASMRGGASDEDMLAG---------LTEEELEEQAVAVEVLQQYPDAPIVLVDDMGNVIGGVDPYADEENGLERGEPNVVGQNDEWPEVAGDTGGMDDPPDAPWRREAEEIIRREVEETGLNCYDIMWSFHKLEVTVTRGDLPEDSEEAGYVDSDALMKAIRAVNQALEQEEERLWVLGRHELIIATPGAKDILTTDREFKAFKGFDVVVLTGSTLNVQREVMGKLHERTFDELVLMQKGRKVRIPLALVDEVRLPDAKMEPGEQ 370          
BLAST of mRNA_P-lacustris_contig9.15441.1 vs. uniprot
Match: A0A4D9D4Q5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4Q5_9STRA)

HSP 1 Score: 140 bits (353), Expect = 2.090e-34
Identity = 77/193 (39.90%), Postives = 112/193 (58.03%), Query Frame = 0
Query:  206 DEEDFPEVAGVIAGMDDPADAPWRLEAEKIVRGQVEACGLTCYDILWTFHRLEVTVTR-------AEGDGPIEEAAYVDSDKLMQAIKAVNAALEDREQELFVLGRHELVVATPGAKDILTTAKQFKAYKGFEIIVKAGGPFKNKRELK---GKLLERTFDELMIMKRGRKVRIPLALVDEVRLPPAVVEVGD 388
            D ++ PE  G   GMDDP DAPWRL+AE+++RG V   G   YD+ W  H + V +TR       +EG+G + +A  + SD++++  +AV  AL   +  L VL R  L V TPGAKD+LTT ++F+A++G+E+ V    P           G+LLER     ++  +G+ V IP  +V EVRLP A+ E  D
Sbjct:  113 DWDNIPEYGGEFLGMDDPLDAPWRLQAEEVIRGAVTEAGYHTYDVTWHLHHVNVDITRQDGGNVESEGEG-VADAGSLSSDEIVEVTRAVEEALLPHDNHLRVLQRFHLCVGTPGAKDVLTTEREFQAFRGYEVQVSVTNPINESPTPNVRVGRLLERNPMHTILNVKGKNVTIPTGMVVEVRLPSAMHEADD 304          
BLAST of mRNA_P-lacustris_contig9.15441.1 vs. uniprot
Match: W7TJE5_9STRA (Ribosome maturation factor rimp n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJE5_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.220e-32
Identity = 76/193 (39.38%), Postives = 109/193 (56.48%), Query Frame = 0
Query:  206 DEEDFPEVAGVIAGMDDPADAPWRLEAEKIVRGQVEACGLTCYDILWTFHRLEVTVTRA-------EGDGPIEEAAYVDSDKLMQAIKAVNAALEDREQELFVLGRHELVVATPGAKDILTTAKQFKAYKGFEIIVKAGGPFKNKRELK---GKLLERTFDELMIMKRGRKVRIPLALVDEVRLPPAVVEVGD 388
            D ++ PE  G   GMDDP DAPWRL AE ++RG V   G   YD+ W  H + V +TR        EG+G + +A  + SD++++  +AV  AL   +  L +L R  L V TPGAKD+LTT ++F+A++G+E+ V    P           G+LLER     ++  +G+ V IP  +V EVRLP A+ E  D
Sbjct:  223 DWDNIPEYGGEFLGMDDPLDAPWRLHAEDVIRGAVTEAGYHTYDVTWHLHHVNVDITRQDVGNVENEGEG-VADAGSLSSDEIVEVTRAVEEALLPHDNHLRILQRFHLCVGTPGAKDVLTTEREFQAFRGYEVQVSVTNPINESPTPNVRVGRLLERNPMHTILNVKGKNVTIPTGMVVEVRLPSAMHEADD 414          
BLAST of mRNA_P-lacustris_contig9.15441.1 vs. uniprot
Match: A0A7S2SW06_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW06_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.760e-28
Identity = 75/173 (43.35%), Postives = 109/173 (63.01%), Query Frame = 0
Query:  213 VAGVIAGMDDPADAPWRLEAEKIVRGQVEA-CGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKAVNAALEDREQELFVLGRHELVVATPGAKDILTTAKQFKAYKGFEIIVKAGGPFK-NKRE-LKGKLLERTFDELMIMKRGRKVRIPLALVDEVRLPPA 382
            V G++ G+DDP D  WRL+AE++VRG V    G+  YD+ W    L+V + +   +G   +   V++     A +A+  ALE  ++EL +L RHEL V++ GAK+IL + ++F+A+KGF+++VK   P   +KRE L GKL+ R   E  I  RGR VRIP  LV+EVRLP A
Sbjct:  122 VYGIMNGLDDPRDVFWRLKAEELVRGAVRPLAGVRIYDVCWNIATLQVLLEQETDEGGAVDLKVVET-----AHRAILDALEAHDEELQILTRHELEVSSKGAKNILDSEREFEAFKGFDVVVKTLAPDGIDKREPLYGKLVGRDVHETTINIRGRPVRIPNHLVEEVRLPEA 289          
BLAST of mRNA_P-lacustris_contig9.15441.1 vs. uniprot
Match: A0A7S1TZY1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZY1_9STRA)

HSP 1 Score: 105 bits (261), Expect = 4.450e-22
Identity = 72/190 (37.89%), Postives = 109/190 (57.37%), Query Frame = 0
Query:  215 GVIAGMDDPADAPWRLEA----EKIVRGQVEACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAI-KAVNAALEDREQEL---FVLGRHELVVATPGAKDILTTAKQFKAYKGFEI-IVKAGGPFKNK------RELKGKLLERTFDELMIMKRGRKVRIPLALVDEVRLPPAVVEVGDE 389
            G   GMDDP DAPWRLEA    E++V+ +         D+LW F  +++TVT      P E+A    S  +++ + +A++  L   E EL     L  H L V TPGA +++TT +QF+AYKGF++ +V  G P  +       + L G L  RT +E+ + ++GR V++P+A+V EVRLP   +E GD+
Sbjct:   96 GPALGMDDPLDAPWRLEAAAEIEELVKEKYPDA--QAVDVLWAFSNVQITVT------PKEDANVPLSSAVIEMLTRAISDDLFPAEPELAHDHWLTMHALSVCTPGASNVITTQEQFEAYKGFQVDVVTLGMPKSDGFAGVPGKTLTGTLHGRTTEEVHLNQKGRIVKVPIAMVSEVRLPEPELENGDK 277          
BLAST of mRNA_P-lacustris_contig9.15441.1 vs. uniprot
Match: A0A7S2SV25_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV25_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.550e-20
Identity = 63/153 (41.18%), Postives = 94/153 (61.44%), Query Frame = 0
Query:  233 EKIVRGQVEA-CGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKAVNAALEDREQELFVLGRHELVVATPGAKDILTTAKQFKAYKGFEIIVKAGGPFK-NKRE-LKGKLLERTFDELMIMKRGRKVRIPLALVDEVRLPPA 382
            +++VRG V    G+  YD+ W    L+V + +   +G   +   V++     A +A+  ALE  ++EL +L RHEL V++ GAK+IL + ++F+A+KGF+++VK   P   +KRE L GKL+ R   E  I  RGR VRIP  LV+EVRLP A
Sbjct:   12 QELVRGAVRPLAGVRIYDVCWNIATLQVLLEQETDEGGAVDLKVVET-----AHRAILDALEAHDEELQILTRHELEVSSKGAKNILDSEREFEAFKGFDVVVKTLAPDGIDKREPLYGKLVGRDVHETTINIRGRPVRIPNHLVEEVRLPEA 159          
BLAST of mRNA_P-lacustris_contig9.15441.1 vs. uniprot
Match: A0A7S1N197_9EUGL (Selenoprotein O n=2 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1N197_9EUGL)

HSP 1 Score: 84.0 bits (206), Expect = 8.540e-14
Identity = 52/163 (31.90%), Postives = 90/163 (55.21%), Query Frame = 0
Query:  229 RLEAEKIVRGQVEACGLTCYDILWTFHRLEVTVTRAEGD-GPIEEAAYVDSDKLMQAIKAVNAALEDREQELFVLGRHELVVATPGAKDILTTAKQFKAYKGFEIIVKAGGPFKNKRELKGKLLERTFDELMIMKRGRKVRIPLALVDEVRLPPAVVEVGDES 390
            + + E IV+  +    L   D+ W   R+EV V+    D  P+   + +  +K+ + IK+   A+   EQ   +L  +EL++A+PGA +++ T ++F+A+KGF + V    P K K + +G L  R    +++  +GR +++P ALV EV LPP   E GD+ 
Sbjct:  134 KADLEGIVQATLLQSELFALDLAWIADRIEVVVSATPPDQDPLGPESLL-MEKVTKLIKSRLWAVPAIEQ---LLANYELILASPGASNVIRTDREFEAWKGFPVTVTTTEPHKKKTKFEGNLTGRDQKHVILNLKGRPIKVPRALVAEVTLPPPKHEKGDQQ 292          
BLAST of mRNA_P-lacustris_contig9.15441.1 vs. uniprot
Match: RIMP_GLOVI (Ribosome maturation factor RimP n=2 Tax=Gloeobacter TaxID=33071 RepID=RIMP_GLOVI)

HSP 1 Score: 71.2 bits (173), Expect = 3.550e-11
Identity = 43/139 (30.94%), Postives = 78/139 (56.12%), Query Frame = 0
Query:  241 EACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKAVNAALEDREQELFVLGRHELVVATPGAKDILTTAKQFKAYKGFEIIVKAGGPFKNKRELKGKLLERTFDELMIMKRGRKVRIPLALVDEVRL 379
            E  GL    + +  H    T+ R +   P E     D +K+ +A++A+   L+ R+    ++G + L V++PG + +LTT ++F A++GF ++VK  GP   K++ +G+LLER  + + +   GR+V +P   V  V+L
Sbjct:   19 EQLGLQLVAVAYQTHTKPATL-RVDIRHPTEGTGLDDCEKMSRALEAL---LDTRDD--LIIGAYNLEVSSPGVERVLTTDREFMAFRGFPVMVKTFGPVDGKKQWEGRLLERDGENVYLTIAGRRVALPRPQVARVQL 151          
BLAST of mRNA_P-lacustris_contig9.15441.1 vs. uniprot
Match: A0A6U6CRZ0_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A6U6CRZ0_GUITH)

HSP 1 Score: 72.4 bits (176), Expect = 4.930e-10
Identity = 52/162 (32.10%), Postives = 81/162 (50.00%), Query Frame = 0
Query:  219 GMDDPADAPWRLEAEKIVRGQVEACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKAVNAALEDREQELFVLGR-HELVVATPGAKDILTTAKQFKAYKGFEIIVKAGGPFKNKRELKGKLLERTFDELMIMKRGRKVRIPLALVDEVRL 379
            G D+     W  +A ++   +     L   D  WT  +L   V   + D        V  ++  +  K++   L+      F+L R + LVV+TPGAKD+LT  ++F A+KGF + V    PFKNK   +G L +R+ + + I  +GR V IP  LV EV++
Sbjct:  578 GPDEGQGLSWVQQAREMAEQEAADMSLRVVDARWTRGKLVFKVEHVDAD-----QFSVGIEECERLSKSLGFRLDAAP---FMLDRPYNLVVSTPGAKDVLTRDREFAAFKGFPVTVTTKEPFKNKLVFEGNLHDRSEEAVRINVKGRIVSIPRPLVLEVKI 731          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig9.15441.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF3_ECTSI2.850e-19583.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C944_9STRA5.920e-8548.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D4Q5_9STRA2.090e-3439.90Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TJE5_9STRA1.220e-3239.38Ribosome maturation factor rimp n=1 Tax=Nannochlor... [more]
A0A7S2SW06_9STRA1.760e-2843.35Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1TZY1_9STRA4.450e-2237.89Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2SV25_9STRA1.550e-2041.18Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1N197_9EUGL8.540e-1431.90Selenoprotein O n=2 Tax=Eutreptiella gymnastica Ta... [more]
RIMP_GLOVI3.550e-1130.94Ribosome maturation factor RimP n=2 Tax=Gloeobacte... [more]
A0A6U6CRZ0_GUITH4.930e-1032.10Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 278..298
IPR036847Ribosome maturation factor RimP, C-terminal domain superfamilySUPERFAMILY74942YhbC-like, C-terminal domaincoord: 318..380

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig9contigP-lacustris_contig9:29845..38509 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig9.15441.1mRNA_P-lacustris_contig9.15441.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig9 29845..38509 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig9.15441.1 ID=prot_P-lacustris_contig9.15441.1|Name=mRNA_P-lacustris_contig9.15441.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=391bp
CQVCLTAVASNTSGGRLTKYTPLPTVNTDRDMRLPFVAGLVLTACTCVPG
FLPPPPCQDALSHGTHFARCAGMCSTRGREATATRLYVGGKIFGEDEPTP
PPQGQPGLIKPAVKARPKGEDSDGEEDGQEGGAGEKRKRRKRRKKYDFDD
MAASEEDEKRFAEELARKFPDIGRVKVDKFGTIIGGVNPFEGTDVKLEDQ
PKPFDDEEDFPEVAGVIAGMDDPADAPWRLEAEKIVRGQVEACGLTCYDI
LWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKAVNAALEDREQELF
VLGRHELVVATPGAKDILTTAKQFKAYKGFEIIVKAGGPFKNKRELKGKL
LERTFDELMIMKRGRKVRIPLALVDEVRLPPAVVEVGDES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036847RimP_C_sf