prot_P-lacustris_contig894.15408.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig894.15408.1
Unique Nameprot_P-lacustris_contig894.15408.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length250
Homology
BLAST of mRNA_P-lacustris_contig894.15408.1 vs. uniprot
Match: A0A6H5L8T9_9PHAE (Protein YIPF n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L8T9_9PHAE)

HSP 1 Score: 345 bits (884), Expect = 7.070e-117
Identity = 185/237 (78.06%), Postives = 198/237 (83.54%), Query Frame = 0
Query:   13 NPEDFQSGRQKLLGQNGGGKAAAPRRGSTLLPSGPTISMCGWLSLQYYRPYFDVDTSEVKSKLLQAAWPIRKTCTFLGEGDSASSKADLYGPVWVSATLIFLLSVAANARRGLMGGASAGDFDEVSSSAYSVLSYLTIGSIGLWAFFRAHSVPLSFAEALSVYGYSLTPFLAAAPLCLFSWPFRSCGLATASLVAAIFVLRSSWPRLLEHMPEKSMVLLLAAVATYHVLWFILLTVV 249
            +PED QSG Q LLG+NGG             P GP ISMCG LSLQYY+PYFDVDTSEVK+KLLQA WP+RKT +FLGEGDS  SK DLYGPVWV ATLIFLLSVA NARR +   AS G+FD+VS+SAYSVL+YL IG+ GLWAFFR H VPLSFAEALSVYGYSLTPFLAAAPLCL SWPFRSCGLA ASLVAAIFVLRSSWPRL EHMPEKSMVLLL AVATYHVLWF+LLTVV
Sbjct:   61 DPEDSQSG-QNLLGKNGGXXXXXXXXXXPP-PPGPKISMCGLLSLQYYQPYFDVDTSEVKTKLLQAIWPMRKTASFLGEGDS--SKVDLYGPVWVPATLIFLLSVAVNARRAMTDDASLGEFDDVSTSAYSVLAYLAIGTGGLWAFFRTHGVPLSFAEALSVYGYSLTPFLAAAPLCLLSWPFRSCGLAAASLVAAIFVLRSSWPRLQEHMPEKSMVLLLTAVATYHVLWFLLLTVV 293          
BLAST of mRNA_P-lacustris_contig894.15408.1 vs. uniprot
Match: M4B6U3_HYAAE (Protein YIPF n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B6U3_HYAAE)

HSP 1 Score: 107 bits (266), Expect = 3.230e-24
Identity = 73/224 (32.59%), Postives = 122/224 (54.46%), Query Frame = 0
Query:   31 GKAAAPRRGSTLLPSGPTISMCGWLSLQYYRPYFDVDTSEVKSKLLQAAWPIRKTCTFLGEGDSASSKADLYGPVWVSATLIFLLSVAANARRGLMGGAS----AGDFDEVSSSAYSVLSYLTIG-SIGLWAFFRAHSVPLSFAEALSVYGYSLTPFLAAAPLCLFSWPFRSCGLATASLVAA---IFVLRSSWPRLLEHMPEKSMVLLLAAVATYHVLWFILL 246
            G  +A   G +  P  P +S+CG  SL +Y+PYFDVDTS+V+ +L+QA  P+++   F    + A    D YGP+W+S TLIF L+  +N    L  G +    A DF  + +SAY+++    +G  + +W   +   VP++    + +YGYS   F+ AA LC+   P  +       L  A    F+L + W  + EH+ ++ M+ +LA ++  H++W +L+
Sbjct:   46 GSKSATFGGDSKQPGRP-VSLCGCFSLSFYQPYFDVDTSDVQLRLMQALLPLKREPVF---AELAVKSPDAYGPLWLSTTLIFCLASCSNVASFLDYGGNRDEWAYDFSRL-ASAYTLVEIFLLGLPMLIWLVGKYFQVPMTLLFLVCLYGYSSIMFIPAAILCIS--PIDAMDWVVMLLAMAWSLFFLLNNLWRVISEHLTKEKMLPVLAVISGTHMMWAVLM 262          
BLAST of mRNA_P-lacustris_contig894.15408.1 vs. uniprot
Match: A0A8J2SR10_9STRA (Protein YIPF n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SR10_9STRA)

HSP 1 Score: 103 bits (257), Expect = 2.680e-23
Identity = 81/217 (37.33%), Postives = 111/217 (51.15%), Query Frame = 0
Query:   24 LLGQNGGGKAAAPRRGSTLLPSGPTISMCGWLSLQYYRPYFDVDTSEVKSKLLQAAWPIRKTCTFLGE--GDSASSKADLYGPVWVSATLIFLLSVAANARRGLMGGASAG-----DFDEVSSSAYSVLSYLTIGSIGLWAFF----RAHSVPLSFAEALSVYGYSLTPFLAAAPLCLF---SWPFRSCGLATASLVAAIFVLRSSWPRLLEHMPEK 226
            LLGQN GG  AAP               C  LS+ YYRPYFDVDT EV ++L  A +       F  E  G +   K D YGP WV+ TL+F ++V ++ R GL+G A AG     DF  V+ +A ++  Y+ + +   WAF     + H  PL+    L V GYSL P+LAAAP C     +WP     +  A    ++F L+++ P +  H  EK
Sbjct:   16 LLGQNAGG--AAP-------------GYCACLSVAYYRPYFDVDTDEVAARLRAALF-------FCNEPFGATLRGKPDAYGPWWVATTLVFAVAVTSHVR-GLLG-AEAGVIYEFDFSAVTFAAATIYGYVALAAATNWAFLNYSLKVHQRPLA---CLCVVGYSLVPYLAAAPACALPYLAWP----AVLAACAAQSLFALKAARPAVEPHPREK 201          
BLAST of mRNA_P-lacustris_contig894.15408.1 vs. uniprot
Match: A0A662XNT8_9STRA (Protein YIPF n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XNT8_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 3.840e-21
Identity = 64/199 (32.16%), Postives = 108/199 (54.27%), Query Frame = 0
Query:   46 GPTISMCGWLSLQYYRPYFDVDTSEVKSKLLQAAWPIRKTCTFLGEGDSASSKADLYGPVWVSATLIFLLSVAANARRGL--MGGASAGDFD-EVSSSAYSVLSYLTIG-SIGLWAFFRAHSVPLSFAEALSVYGYSLTPFLAAAPLCLFSWPFRSCGLATASLVAAIFVLRSS-WPRLLEHMPEKSMVLLLAAVATYH 239
            G  + MCG L+L YY+PYFDVDT++V+ +L++A  P +K  +F    + A +  D YGP W+S TLIF L+  +N    L   G  S   +D    +SAY+++    +G  + +W   +   VP++    + +YGYS+  F+ AA LC          +   ++  ++F L S+ W  + EH+ ++ M+ +LA +   H
Sbjct:   23 GNAMGMCGCLTLAYYKPYFDVDTTDVQLRLMRALVPFKKEPSF---AELAMASPDAYGPFWLSTTLIFCLASCSNVASFLDYTGDTSEWSYDFSRLASAYTLVEIFLLGLPVLIWLVGKYFQVPMTLLFLVCLYGYSMMMFIPAAILCTIPIDAMDWVVLLLAMTWSLFFLLSNLWSVISEHLTKEKMLPVLAVIRYAH 218          
BLAST of mRNA_P-lacustris_contig894.15408.1 vs. uniprot
Match: A0A7S0SX75_9STRA (Protein YIPF (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SX75_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 2.350e-20
Identity = 64/193 (33.16%), Postives = 104/193 (53.89%), Query Frame = 0
Query:   49 ISMCGWLSLQYYRPYFDVDTSEVKSKLLQAAWPIRKTCTFLGEGDSASSKADLYGPVWVSATLIFLLSVAANARRGLMGGASAG-----DFDEVSSSAYSVLSYLTIGSIGLWAFFRAHSVPLSFAEALSVYGYSLTPFLAAAPLCLF-----SWPFRSCGLATASLVAAIFVLRSSWPRLLEHMPEKSMVLL 231
            +  CG LS+ YY+P+FDVDT+++  +L  A +  R+   F+   D  S K D YGP W+S TL+F L+V ++ R G +    AG     DF  + S++  +  + +     +W   + +   +     + VYGYSL  F+ A+ LCLF     SW      L TA L +++F+LRS  P ++  + + S++LL
Sbjct:   53 MPFCGCLSISYYQPFFDVDTTDIIKRLSLAVFYCRRETNFI---DIISDKPDAYGPFWISTTLVFTLAVTSHIR-GWLSSWMAGTTWVYDFQSIISASSLIYGFASFVPFLVWIILKQYDGNVKLITMICVYGYSLFMFIPASLLCLFPSEVVSWLIL---LVTACL-SSLFILRSLGPLIIASVKQDSIMLL 237          
BLAST of mRNA_P-lacustris_contig894.15408.1 vs. uniprot
Match: A0A2D4BSX3_PYTIN (Protein YIPF n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSX3_PYTIN)

HSP 1 Score: 95.1 bits (235), Expect = 8.060e-20
Identity = 72/247 (29.15%), Postives = 125/247 (50.61%), Query Frame = 0
Query:    9 VIDPNPEDFQSGRQKLLGQNGGGKAAAPRRGSTLLPSGPTISMCGWLSLQYYRPYFDVDTSEVKSKLLQAAWPIRKTCTFLGEGDSASSKADLYGPVWVSATLIFLLSVAANARR--GLMGGASAG--DFDEVSSSAYSVLSYLTIGSIGLWAFFR-AHSVPLSFAEALSVYGYSLTPFLAAAPLCLFSWPFRSCGLATASLVAAI-----FVLRSSWPRLLEHMPEKSMVLLLAAVATYHVLWFIL 245
            ++ P   D   G++  +G + G  +A P              MC  L+L YY+P+FDVDTS+++ ++++A  P + T +F    +  +   D YGP W+S TLIF L+  +N       +G       DF  V+++   V  +L    + LW   +   +VP+S +  + +YGYS   F+ A  +C+   P    GL   +++ A+     F+L + W  + EH+ ++ M+ LLA +A  H++W IL
Sbjct:   25 LMSPKVRDTLIGKK--MGLDDGNSSARP------------TGMCSCLTLAYYQPFFDVDTSDIQQRMVRAILPFKSTPSFF---EIVAPAPDAYGPFWLSVTLIFCLASCSNVASYWDFVGDRREWVYDFSRVATACTVVEIFLVGLPVLLWLVGKYGANVPMSLSFLMCLYGYSTAVFIPATFICMV--PLE--GLDWVAVLVAMAWSLYFLLTNVWAMISEHLSKEKMLPLLAVIAASHLIWAIL 250          
BLAST of mRNA_P-lacustris_contig894.15408.1 vs. uniprot
Match: A0A812K3Y1_9DINO (Protein YIPF n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812K3Y1_9DINO)

HSP 1 Score: 91.3 bits (225), Expect = 2.540e-18
Identity = 63/176 (35.80%), Postives = 94/176 (53.41%), Query Frame = 0
Query:   50 SMCGWLSLQYYRPYFDVDTSEVKSKLLQAAWPIRKTCTFLGEGDSASSKADLYGPVWVSATLIFLLSVAANARR------GLMGGASAGDFDEVSSSAYSVLSYLTIGSIGLWAFFRAHSVPLSFAEALSVYGYSLTPFLAAAPLCLF--SWPFRSCGLATASLVAAIFVLRSSWP 217
            ++CG LS++YYRP F+V T+EV  +   A  P      F   GD+     DLY P+W S TL+FL+   AN         G M      DF  V+S+A  +  YL + +   WA  R   VP SF + L ++GY++ PFL A+ LC F  SW  +   +  A+ ++A F++R++ P
Sbjct:   46 ALCGCLSVEYYRPLFNVTTAEVGERAKAALLPFTAEPFFAVIGDAP----DLYVPLWGSVTLVFLIGAMANFSSWASFDAGDMESIWHYDFALVTSAAGFIFGYLLVCAAATWAALRYMGVPFSFMKLLCLFGYAVLPFLPASLLCGFPLSW-LQWLAVVGAATLSAYFLVRAAVP 216          
BLAST of mRNA_P-lacustris_contig894.15408.1 vs. uniprot
Match: A0A836CBC5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBC5_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 1.240e-16
Identity = 67/200 (33.50%), Postives = 94/200 (47.00%), Query Frame = 0
Query:   51 MCGWLSLQYYRPYFDVDTSEVKSKLLQAAWPIRKTCTFLGEGDSASSKADLYGPVWVSATLIFLLSVAANARRGLMGGASAGDFDEVSSSAYSVLSYLTIGSIGLWAFFRAHSVPLSFAEALSVYGYSLTPF-----LAAAPLCLFSWPFRSCGLATASLVAAIFVLRSSWPRLLEHMPEKSMVLLLAAVATYHVLWFIL 245
            + G LS+   +P+F+V+ ++V  ++L      R       EG +A    DLYGP+W SATLIF+L+ AAN   GL  G    DF    S    V  Y+ +G  GLWA  +A  + LS A  L +YGYSL  F     L A P  +  W      L   ++V   F+  +  P + E  P  +M +L         LW  L
Sbjct:   67 LMGCLSMGSLKPFFNVNDADVYDRILHGLLVRRGPLLTAAEGQTA----DLYGPIWCSATLIFMLAAAANIS-GLESGRGP-DFRLALSGVGIVYGYMLVGGFGLWAAGKAWGLELSLAHTLCLYGYSLVGFVPMALLTAIPYGIVQWV----ALLVPAIVGGGFLYLNVMPAVREKAPAVAMTVLACLGGLQVALWLAL 256          
BLAST of mRNA_P-lacustris_contig894.15408.1 vs. uniprot
Match: Q68EH1_DANRE (Protein YIPF n=4 Tax=Danio rerio TaxID=7955 RepID=Q68EH1_DANRE)

HSP 1 Score: 86.3 bits (212), Expect = 3.300e-16
Identity = 66/215 (30.70%), Postives = 106/215 (49.30%), Query Frame = 0
Query:   41 TLLPSGPTISMCGWLSLQYYRPYFDVDTSEVKSKLLQAA--WPIRKTCTFLGEGDSASSKADLYGPVWVSATLIFLLSVAANARRGLMGGAS-----AGDFDEVSSSAYSVLSYLTIGSIGLWAFFR------AHSVPLSFAEALSVYGYSLTPFLAAAPLCLF-SWPFRSCGLATASLVAAIFVLRSSWPRLLEHMPEKSMVLLLAAVATYHVL 241
            T L SG   S   W + +YY+  FDVDT +VKS++L +   WP R             S  DLYGP W+ ATL+F ++++ N    L            DF +V+ +A ++ SY  +  + LW F        A  V  SF + + VYGYSL+ ++ A  + +  S   R C +A A  ++   ++ + WP + E  P + ++ +L+ +   HVL
Sbjct:   62 TKLLSGERKSAPFW-TFEYYQTLFDVDTHQVKSRILGSVVPWPRRNFVEVY-----LRSNPDLYGPFWICATLVFAIAISGNISSFLRHHGQPKYKYVPDFGKVTMAATAIYSYALLVPLALWGFLTWRNRTIASLVSYSFMQIVCVYGYSLSIYIPAVIVWIIPSEGLRWCSIAVAMCLSGSVLVMTFWPAIREDKP-RIIIAILSTIVILHVL 269          
BLAST of mRNA_P-lacustris_contig894.15408.1 vs. uniprot
Match: A0A6J2VHE8_CHACN (Protein YIPF n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2VHE8_CHACN)

HSP 1 Score: 84.3 bits (207), Expect = 1.630e-15
Identity = 61/216 (28.24%), Postives = 108/216 (50.00%), Query Frame = 0
Query:   40 STLLPSGPTISMCGWLSLQYYRPYFDVDTSEVKSKLLQAA--WPIRKTCTFLGEGDSASSKADLYGPVWVSATLIFLLSVAAN-----ARRGLMGGASAGDFDEVSSSAYSVLSYLTIGSIGLWAFFR------AHSVPLSFAEALSVYGYSLTPFLAAAPLCLF-SWPFRSCGLATASLVAAIFVLRSSWPRLLEHMPEKSMVLLLAAVATYHVL 241
            +T L SG   S   W +  YY+ +FD+DT +VK ++L +   WP +             S  DLYGP W+ ATL+F ++++ N     + +G        DF +V+ +A ++ SY  +  + LW F         ++V  SF E + VYGYSL  ++ A  L +  S   R C +  A  ++   ++ + WP + +  P  ++ ++L+ +A + +L
Sbjct:   62 TTQLLSGQKKSAPFW-TFAYYQTFFDIDTYQVKDRILGSMLPWPGKNFVRLY-----IRSNPDLYGPFWICATLVFAIAISGNMSSFLSHQGSPNHTYVPDFGKVTIAATTIYSYAWLVPLALWGFLTWRNNKVMNAVSYSFLEIVCVYGYSLFIYIPAVVLWIIPSEGLRWCSIMVALCLSGSVLVMTFWPAIRDDQPRIAIAMILSLMALHTLL 271          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig894.15408.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L8T9_9PHAE7.070e-11778.06Protein YIPF n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
M4B6U3_HYAAE3.230e-2432.59Protein YIPF n=1 Tax=Hyaloperonospora arabidopsidi... [more]
A0A8J2SR10_9STRA2.680e-2337.33Protein YIPF n=1 Tax=Pelagomonas calceolata TaxID=... [more]
A0A662XNT8_9STRA3.840e-2132.16Protein YIPF n=2 Tax=Nothophytophthora sp. Chile5 ... [more]
A0A7S0SX75_9STRA2.350e-2033.16Protein YIPF (Fragment) n=1 Tax=Chromulina nebulos... [more]
A0A2D4BSX3_PYTIN8.060e-2029.15Protein YIPF n=1 Tax=Pythium insidiosum TaxID=1147... [more]
A0A812K3Y1_9DINO2.540e-1835.80Protein YIPF n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A836CBC5_9STRA1.240e-1633.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
Q68EH1_DANRE3.300e-1630.70Protein YIPF n=4 Tax=Danio rerio TaxID=7955 RepID=... [more]
A0A6J2VHE8_CHACN1.630e-1528.24Protein YIPF n=1 Tax=Chanos chanos TaxID=29144 Rep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006977Yip1 domainPFAMPF04893Yip1coord: 64..210
e-value: 5.2E-9
score: 36.0
NoneNo IPR availablePANTHERPTHR12822:SF2PROTEIN YIPFcoord: 44..247
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 194..198
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 171..193
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 228..248
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 160..170
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 199..216
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 217..227
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 122..140
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 141..159
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..100
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 101..121
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 249..249
NoneNo IPR availableTMHMMTMhelixcoord: 199..216
NoneNo IPR availableTMHMMTMhelixcoord: 229..248
NoneNo IPR availableTMHMMTMhelixcoord: 137..159
NoneNo IPR availableTMHMMTMhelixcoord: 172..194
NoneNo IPR availableTMHMMTMhelixcoord: 105..122
IPR039765Protein Yip5/YIPF1/YIPF2PANTHERPTHR12822UNCHARACTERIZEDcoord: 44..247

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig894contigP-lacustris_contig894:75459..78331 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig894.15408.1mRNA_P-lacustris_contig894.15408.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig894 74626..78535 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig894.15408.1 ID=prot_P-lacustris_contig894.15408.1|Name=mRNA_P-lacustris_contig894.15408.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=250bp
MSSYLRILVIDPNPEDFQSGRQKLLGQNGGGKAAAPRRGSTLLPSGPTIS
MCGWLSLQYYRPYFDVDTSEVKSKLLQAAWPIRKTCTFLGEGDSASSKAD
LYGPVWVSATLIFLLSVAANARRGLMGGASAGDFDEVSSSAYSVLSYLTI
GSIGLWAFFRAHSVPLSFAEALSVYGYSLTPFLAAAPLCLFSWPFRSCGL
ATASLVAAIFVLRSSWPRLLEHMPEKSMVLLLAAVATYHVLWFILLTVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006977Yip1
IPR039765Yip5/YIPF1/YIPF2