prot_P-lacustris_contig892.15393.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig892.15393.1
Unique Nameprot_P-lacustris_contig892.15393.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length196
Homology
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BLAST of mRNA_P-lacustris_contig892.15393.1 vs. uniprot
Match: A0A6H5KAV0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KAV0_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 5.340e-41
Identity = 69/99 (69.70%), Postives = 82/99 (82.83%), Query Frame = 0 
Query:   55 PPPMHAKNTQKGVEGLLAPHEARLLQAFSLGRTVRLLALLDGLILLINCAYFPILFMLLLWGPVSGWMAGTRYSTAWTYAYCCYYLLRLSAYLAYVFEG 153
            PP +       GV G +APHEA+L++A SL +T+R LA+ DGLIL+INC YFP+L +LLLWGP+SGWMAGTRYSTAWTYAYCCYYLLRLS YL+YVFEG
Sbjct:   77 PPSVPFDPADLGVAGFMAPHEAKLMEASSLAKTIRWLAVFDGLILVINCGYFPMLLLLLLWGPLSGWMAGTRYSTAWTYAYCCYYLLRLSTYLSYVFEG 175
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BLAST of mRNA_P-lacustris_contig892.15393.1 vs. uniprot
Match: A0A6V1TFA5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TFA5_HETAK)

HSP 1 Score: 74.3 bits (181), Expect = 8.090e-13
Identity = 36/87 (41.38%), Postives = 62/87 (71.26%), Query Frame = 0 
Query:   68 EGL-LAPHEARLLQAFSLGRTVRLLALLDGLILLINCAYFPILFMLLLWGPVSGWMAGTRYSTAWTYAYCCYYLLRLSAYLAYVFEG 153
            EG+ L  HE RLL+ +SLGR VR++AL+DG+ILL +C  FP+ F+L+ WGP++G++  + +  ++   Y  YY+L+++A + ++  G
Sbjct:   91 EGMALGDHERRLLETYSLGRGVRVIALIDGMILLFDCLLFPVFFVLM-WGPLAGYLGSSYFRFSFVTCYFLYYVLKMAADIIFILYG 176
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig892.15393.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KAV0_9PHAE5.340e-4169.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6V1TFA5_HETAK8.090e-1341.38Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 195..195
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 119..129
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 130..151
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 180..195
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..118
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 152..162
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 163..179
NoneNo IPR availableTMHMMTMhelixcoord: 96..118
NoneNo IPR availableTMHMMTMhelixcoord: 128..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig892contigP-lacustris_contig892:39335..41390 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig892.15393.1mRNA_P-lacustris_contig892.15393.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig892 39209..41648 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig892.15393.1 ID=prot_P-lacustris_contig892.15393.1|Name=mRNA_P-lacustris_contig892.15393.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=196bp
MLCSSSEASMNIACPMAEHCHYLEGRVCHGKRHRPVSPSLFSPRFLRALV
LLFMPPPMHAKNTQKGVEGLLAPHEARLLQAFSLGRTVRLLALLDGLILL
INCAYFPILFMLLLWGPVSGWMAGTRYSTAWTYAYCCYYLLRLSAYLAYV
FEGEPSRKAPPTLLRFGCWLVMSGVAAASECCECREHSRVLTPWL*
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