prot_P-lacustris_contig88.15278.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig88.15278.1
Unique Nameprot_P-lacustris_contig88.15278.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length137
Homology
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BLAST of mRNA_P-lacustris_contig88.15278.1 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 3.410e-46
Identity = 81/125 (64.80%), Postives = 94/125 (75.20%), Query Frame = 0 
Query:    1 MPVSSAAEVKNFNQMWMGFVGGAGRQSMLDFDAFPLEWNKAVSLMEEGKSPATAIFRKTAGQLKAYWTKHHENINARSTLRSVQGQDCAVRTRLRAPDDVGGPA--VAKPWLPQAPSGFQFPEQL 123
            MPV+SAAE   F  MW+ FV  AGRQ++LDFD+F LEWNKAVSLMEEGKS    IFRKTAG LKAYW  HHE +N R TLR  +G+D  +R  LRAP DVGGPA  +A+PW+ +AP GFQ PEQL
Sbjct: 1013 MPVTSAAEKAKFGDMWLEFVDPAGRQTLLDFDSFALEWNKAVSLMEEGKSAVIPIFRKTAGHLKAYWKAHHEQVNMRDTLRPARGRDAPIREHLRAPGDVGGPAGGLAQPWILEAPEGFQMPEQL 1137
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BLAST of mRNA_P-lacustris_contig88.15278.1 vs. uniprot
Match: A0A6H5JD89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD89_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 1.690e-22
Identity = 48/67 (71.64%), Postives = 53/67 (79.10%), Query Frame = 0 
Query:    1 MPVSSAAEVKNFNQMWMGFVGGAGRQSMLDFDAFPLEWNKAVSLMEEGKSPATAIFRKTAGQLKAYW 67
            MPV+SAAE   F  MW+ FV  AGRQ++LDFD+F LEWNKAVSLMEEGKS    IFRKTAG LKAYW
Sbjct:  440 MPVTSAAEKAKFGDMWLEFVDPAGRQTLLDFDSFALEWNKAVSLMEEGKSAVIPIFRKTAGHLKAYW 506
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig88.15278.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JET4_9PHAE3.410e-4664.803'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JD89_9PHAE1.690e-2271.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig88contigP-lacustris_contig88:181483..182105 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig88.15278.1mRNA_P-lacustris_contig88.15278.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig88 181342..183078 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig88.15278.1 ID=prot_P-lacustris_contig88.15278.1|Name=mRNA_P-lacustris_contig88.15278.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=137bp
MPVSSAAEVKNFNQMWMGFVGGAGRQSMLDFDAFPLEWNKAVSLMEEGKS
PATAIFRKTAGQLKAYWTKHHENINARSTLRSVQGQDCAVRTRLRAPDDV
GGPAVAKPWLPQAPSGFQFPEQLPALGASAAETEAS*
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