prot_P-lacustris_contig1226.1685.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1226.1685.1
Unique Nameprot_P-lacustris_contig1226.1685.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length378
Homology
BLAST of mRNA_P-lacustris_contig1226.1685.1 vs. uniprot
Match: D7FPF9_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF9_ECTSI)

HSP 1 Score: 295 bits (754), Expect = 8.700e-90
Identity = 204/383 (53.26%), Postives = 221/383 (57.70%), Query Frame = 0
Query:   17 RPFQDTSVELRKSCDYCVRLKRACDGKNPCSLCARRNKPCTRSARKKSGPAKGTKYAPRRKRSVIAEWADRTSGARQPHLPEEFLGAGXXXXXXXXXXXXXXXXXXXXXXRPFPIAPAEAAGAPRAPGMSYYGGGLSSHAAAAPG--------GRFGAEASWEEESTARPLSGHHRGRRQMEFGGPSSMSTSMALSLPMGWYASAEHERAETEARGG--GDRGGSRQMSPRLHAPPMGYAPTTAEEFSRRQQHYASSYHH-GSWSMSSLEAEGLR--------ERPG--AAREPYRRRTLEPSSRSWASQPDPFPGSPPEG-VGLTHGTRVRMVSALSRAGLQGLPSFVD------RPLMRPTAEFYPSPAPSAREREMAGRP 371
            R  +D ++ELRKSCDYCVRLKRACDGKNPCSLCARR+KPCTRSARKKSGPAKGTKYAPRRKRSVIAEWADRTSGAR P LP EF G G                        FP+AP +AAG  RA G +YY G                   GRFGAEA WEE     PL G  RGRR  E G PSS S S +  LP  WYA       ETE RGG  G  GG R  +P    PPMGYAPTTAEE SRRQQ +   YHH  S+SMSSLE              RPG  AA EPYRRRTLE     WAS  DPF  SP +G   L  G RVR+      +G               R +MRP A++YPSPA S R REMAGRP
Sbjct:    9 RSRRDPTIELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKRSVIAEWADRTSGARGPLLPHEFPGGGTRGGGGQLPHHD------------FPLAPIDAAGM-RAAGRAYYSGXXXXXXXXXXXXXXXXXXXGRFGAEALWEEGG---PLPGQGRGRRPGEEGHPSS-SLSPSSGLPFPWYAPGPSPHEETEGRGGERGGVGGGRGFAP----PPMGYAPTTAEELSRRQQEHG--YHHRASYSMSSLEXXXXXXXXXXXXGRRPGVPAAPEPYRRRTLELPPGHWASPSDPFLRSPQQGEAALAQGKRVRLSPPTLGSGAAXXXXXXXXXXXXXRSVMRPGADYYPSPATSPRAREMAGRP 368          
BLAST of mRNA_P-lacustris_contig1226.1685.1 vs. uniprot
Match: A0A6H5L009_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L009_9PHAE)

HSP 1 Score: 274 bits (700), Expect = 6.690e-82
Identity = 190/366 (51.91%), Postives = 205/366 (56.01%), Query Frame = 0
Query:   20 QDTSVELRKSCDYCVRLKRACDGKNPCSLCARRNKPCTRSARKKSGPAKGTKYAPRRKRSVIAEWADRTSGARQPHLPEEFLGAGXXXXXXXXXXXXXXXXXXXXXXRPFPIAPAEAAGAPRAPGMSYYGGGLSSHAAAAP-----GGRFGAEASWEEESTARPLSGHHRGRRQMEFGGPSSMSTSMALSLPMGWYASAEHERAETEARGGGDRGGSRQMSPRLHAPPMGYAPTTAEEFSRRQQHYASSYHH-GSWSMSSLEAEGLR-----ERPGAA--REPYRRRTLEPSSRSWASQPDPFPGSPPEG-VGLTHGTRVRMVSALSRAGLQGLPSFVDRPLMRPTAEFYPSPAPSAREREMAGRP 371
            QD +VELRKSCDYCVRLKRACDGKNPCSLCARR+KPCTRSARKKSGPAKGTKYAPRRKRSVIAEWADRT GA  P LP EF G G                        F +AP +AAG   A      GGGLS+H          GGRFGAEA WEE +   P  G  RGR   E G PSS+  S +  LP  WYAS      E E RGG                  GYAPTTAEE S         YHH  S+SMS LEAE         RPGA   REPYRRRT E     WAS  DPF  SP +G   L  G RVR+      +G  G      RP+MRP A++YPSPA S R  EMAGRP
Sbjct:    4 QDPTVELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKRSVIAEWADRTGGAGGPPLPHEFQGGGTSGGGGQLPHHD------------FSLAPFDAAGMRAAERTYNSGGGLSAHXXXXXXXXXXGGRFGAEALWEEGA---PRPGQGRGRWPGEEGHPSSLLPS-SPGLPFPWYASRPSPHGEAEGRGGERGXXXXXXXXXXXXXXXGYAPTTAEELSXXXXXXG--YHHRASYSMSFLEAEXXXXXXAGRRPGAPAMREPYRRRTPELPPGHWASPSDPFLRSPQQGEAALAQGKRVRLSPPTFGSGAAGGSGGGSRPVMRPGADYYPSPATSPRASEMAGRP 351          
BLAST of mRNA_P-lacustris_contig1226.1685.1 vs. uniprot
Match: D8LPZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ9_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 1.710e-15
Identity = 43/58 (74.14%), Postives = 46/58 (79.31%), Query Frame = 0
Query:   21 DTSVELRKSCDYCVRLKRACDGKNPCSLCARRNKPCTRSARKKSGPAKGTKYAPRRKR 78
            D  V LRKSCD CVRLKRACDGKNPC LC RR + CTRS ++KSGPAKGTKY  RR R
Sbjct:   57 DGRVLLRKSCDLCVRLKRACDGKNPCHLCLRRRETCTRSVKRKSGPAKGTKYTTRRSR 114          
BLAST of mRNA_P-lacustris_contig1226.1685.1 vs. uniprot
Match: A0A6H5L7F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F3_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 1.800e-14
Identity = 45/68 (66.18%), Postives = 52/68 (76.47%), Query Frame = 0
Query:   24 VELRKSCDYCVRLKRACDGKNPCSLCARRNKPCTRSARKKSGPAKGTKYAPRRKR--SVIAEWADRTS 89
            V LRKSCD CVRLKRACDG++PC LC RR + CTRS ++KSGPAKGTKY  RR R  + IAE A  +S
Sbjct:   32 VLLRKSCDLCVRLKRACDGQSPCQLCLRRRETCTRSVKRKSGPAKGTKYTTRRVRMEAGIAEPASSSS 99          
BLAST of mRNA_P-lacustris_contig1226.1685.1 vs. uniprot
Match: D8LKM5_ECTSI (Zinc finger transcriptional regulator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM5_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 2.040e-13
Identity = 37/55 (67.27%), Postives = 43/55 (78.18%), Query Frame = 0
Query:   26 LRKSCDYCVRLKRACDGKNPCSLCARRNKPCTRSARKKSGPAKGTKYAPRRKRSV 80
            LRKSCDYCVR+KR C G  PC+LC RRNK C RS +K+SGPAKGTKY  R+ R +
Sbjct:   23 LRKSCDYCVRMKRGCSGGTPCALCNRRNKNCIRSIKKRSGPAKGTKYCKRKPRKI 77          
BLAST of mRNA_P-lacustris_contig1226.1685.1 vs. uniprot
Match: A0A6H5JII0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JII0_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 1.420e-7
Identity = 29/43 (67.44%), Postives = 36/43 (83.72%), Query Frame = 0
Query:   36 LKRACDGKNPCSLCARRNKPCTRSARKKSGPAKGTKYAPRRKR 78
            +KRACDG +PC+LC+RR K C R  R+KSGPAKG KYAPRR++
Sbjct:    1 MKRACDGGSPCALCSRRGKVCERRLRRKSGPAKGAKYAPRRRK 43          
BLAST of mRNA_P-lacustris_contig1226.1685.1 vs. uniprot
Match: D8LM00_ECTSI (Zn(2)-C6 fungal-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM00_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 1.840e-7
Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0
Query:   20 QDTSVELRKSCDYCVRLKRACDGKNPCSLCARRNKPCTRSARKKSGPAKGTK 71
            +DT V LR +CD C R+KR CDG  PC+ C RR++PC  S ++KSGP KG+K
Sbjct:  201 RDTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSK 252          
BLAST of mRNA_P-lacustris_contig1226.1685.1 vs. uniprot
Match: A0A6H5JM19_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM19_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 2.010e-7
Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0
Query:   20 QDTSVELRKSCDYCVRLKRACDGKNPCSLCARRNKPCTRSARKKSGPAKGTK 71
            +DT V LR +CD C R+KR CDG  PC+ C RR++PC  S ++KSGP KG+K
Sbjct:  177 RDTMVVLRSACDACHRMKRKCDGLQPCNRCRRRSRPCGYSYKQKSGPPKGSK 228          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1226.1685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FPF9_ECTSI8.700e-9053.26Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5L009_9PHAE6.690e-8251.91Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LPZ9_ECTSI1.710e-1574.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7F3_9PHAE1.800e-1466.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKM5_ECTSI2.040e-1367.27Zinc finger transcriptional regulator n=1 Tax=Ecto... [more]
A0A6H5JII0_9PHAE1.420e-767.44Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LM00_ECTSI1.840e-755.77Zn(2)-C6 fungal-type domain-containing protein (Fr... [more]
A0A6H5JM19_9PHAE2.010e-755.77Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 24..67
e-value: 0.0081
score: 23.6
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 28..62
e-value: 1.6E-6
score: 28.1
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 29..58
score: 8.907
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 23..84
e-value: 4.5E-6
score: 28.5
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 24..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1226contigP-lacustris_contig1226:24538..39898 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1226.1685.1mRNA_P-lacustris_contig1226.1685.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1226 23588..40686 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1226.1685.1 ID=prot_P-lacustris_contig1226.1685.1|Name=mRNA_P-lacustris_contig1226.1685.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=378bp
MQDAGESDGGAEKAAARPFQDTSVELRKSCDYCVRLKRACDGKNPCSLCA
RRNKPCTRSARKKSGPAKGTKYAPRRKRSVIAEWADRTSGARQPHLPEEF
LGAGAGSGVGEGGGGARSSSLGGGGGRPFPIAPAEAAGAPRAPGMSYYGG
GLSSHAAAAPGGRFGAEASWEEESTARPLSGHHRGRRQMEFGGPSSMSTS
MALSLPMGWYASAEHERAETEARGGGDRGGSRQMSPRLHAPPMGYAPTTA
EEFSRRQQHYASSYHHGSWSMSSLEAEGLRERPGAAREPYRRRTLEPSSR
SWASQPDPFPGSPPEGVGLTHGTRVRMVSALSRAGLQGLPSFVDRPLMRP
TAEFYPSPAPSAREREMAGRPQSEQGN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf