prot_P-lacustris_contig12.1482.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig12.1482.1
Unique Nameprot_P-lacustris_contig12.1482.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length168
Homology
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BLAST of mRNA_P-lacustris_contig12.1482.1 vs. uniprot
Match: A0A6H5KJI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJI1_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 5.840e-31
Identity = 80/147 (54.42%), Postives = 96/147 (65.31%), Query Frame = 0 
Query:   29 QRNNKNT-VSPCDPENGN----GYLCMG--LGFLPSKEAVASKGLEAKVDMATHGHDSWALTNLGAWRNKSLSTSSEGKSAEFVKSRQREARRAMLGAAPEGGAARKDKD--APDEQSVGAGVGCRPVPAVVPAKPPGEGGCSDMAV 166
            QR+++   +SP D + G+    G + +G  LG LPSKEA+ASKGLEAKVDMAT+GH SWALTNLGAWR++SL  S  GK A+FVKSRQREA+RAMLG A             AP   +V      RPV  VVPAKPP E G S M +
Sbjct:    7 QRHHRGCGLSPGDLKTGDDSIDGSVGLGNWLGSLPSKEAMASKGLEAKVDMATYGHQSWALTNLGAWRSQSLGASGGGKPADFVKSRQREAKRAMLGTAAXXXXXXXTGPGAAPTNATVVEEGADRPVLMVVPAKPPEEMGRSAMVI 153
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig12.1482.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJI1_9PHAE5.840e-3154.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..167
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig12contigP-lacustris_contig12:8150..9313 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig12.1482.1mRNA_P-lacustris_contig12.1482.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig12 8073..9925 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig12.1482.1 ID=prot_P-lacustris_contig12.1482.1|Name=mRNA_P-lacustris_contig12.1482.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=168bp
MPRFYATSLVAAVPCCTCRVRLTLLGFHQRNNKNTVSPCDPENGNGYLCM
GLGFLPSKEAVASKGLEAKVDMATHGHDSWALTNLGAWRNKSLSTSSEGK
SAEFVKSRQREARRAMLGAAPEGGAARKDKDAPDEQSVGAGVGCRPVPAV
VPAKPPGEGGCSDMAVG*
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