prot_P-lacustris_contig1178.1344.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1178.1344.1
Unique Nameprot_P-lacustris_contig1178.1344.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length236
Homology
BLAST of mRNA_P-lacustris_contig1178.1344.1 vs. uniprot
Match: D7G604_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G604_ECTSI)

HSP 1 Score: 259 bits (663), Expect = 6.090e-84
Identity = 134/234 (57.26%), Postives = 161/234 (68.80%), Query Frame = 0
Query:    1 ARKKLLNDGKVLVPLFGSDQQAKEKTKSMHSCVEQYVQGKGCEVQKSMLMRKHQRIKGQHRYMIPPEDMGI-FASDADAMGETMAYVLQALDCSGYDRILVEKSTCLVSLKKTSVQVLHRDQNLEKINDLLEGKVGAATRNNTRRQPPPYSALCSFQQGTSLRCVDRSHLSNSKEYEIGDSVRCPVPLGWGLLWHGLFVHAGAECSVPWHARLHMYLKVLGCSDAATGKIDLAE 233
            ARKKL+ DGKV VPLF S+Q+A+ KT SM S V + V+     V+  ML R++ RIKGQ R MIP  D+G  F S +  M +T+ YVL ALD  GYDRIL E STCL+SL+    QV HRDQ LEKI D + G+  A TR N+R QPPPYSALC+ Q+GT LR VD SHL   K YE G +V C +P GWGLLWHGL VH G  C+  W ARLH++L+ LGC  AATGKIDL +
Sbjct:   33 ARKKLMRDGKVCVPLFASEQEARTKTSSMASAVARLVEDTDGSVKSVMLKRRYTRIKGQDRLMIPLSDLGTDFGSVSGDMEDTLVYVLWALDNPGYDRILAEISTCLLSLEGLLAQVFHRDQVLEKITDQMAGRTQAGTRGNSRPQPPPYSALCAVQEGTILRIVDGSHLDVHKNYEQGSAVECQIPRGWGLLWHGLSVHGGDGCTAAWLARLHIFLRALGCPQAATGKIDLVD 266          
BLAST of mRNA_P-lacustris_contig1178.1344.1 vs. uniprot
Match: D7G5U5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5U5_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 3.190e-63
Identity = 98/155 (63.23%), Postives = 113/155 (72.90%), Query Frame = 0
Query:   79 MGETMAYVLQALDCSGYDRILVEKSTCLVSLKKTSVQVLHRDQNLEKINDLLEGKVGAATRNNTRRQPPPYSALCSFQQGTSLRCVDRSHLSNSKEYEIGDSVRCPVPLGWGLLWHGLFVHAGAECSVPWHARLHMYLKVLGCSDAATGKIDLAE 233
            M ET+ YVL ALD  GYDRIL E STCL+SL+    QVLHRDQ LEKI D + G+  AATR N+R QPPPYSALC+FQ+GT LR VD SHL   K YE G +V C +P GWGLLWHGL VH G  C+  W ARLH++L+ LGC  AATGKIDL +
Sbjct:    1 MEETLVYVLWALDNPGYDRILAEISTCLLSLEGLLAQVLHRDQVLEKITDQMAGRTQAATRGNSRPQPPPYSALCAFQEGTILRIVDGSHLDVHKNYEQGRAVECQIPRGWGLLWHGLSVHGGDGCTAAWLARLHIFLRALGCPQAATGKIDLVD 155          
BLAST of mRNA_P-lacustris_contig1178.1344.1 vs. uniprot
Match: A0A6H5L1S8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1S8_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 2.010e-8
Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = 0
Query:    1 ARKKLLNDGKVLVPLFGSDQQAKEKTKSMHSCVEQYVQGKGCEVQKSMLMRKHQRI 56
            AR KLL DGK  VPLF S+QQAKEKTKSM S V Q V+  G  V+++MLM+K+ RI
Sbjct:  126 ARLKLLTDGKAFVPLFLSEQQAKEKTKSMLSSVAQLVEDSGGVVKRAMLMKKYDRI 181          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1178.1344.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G604_ECTSI6.090e-8457.26Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
D7G5U5_ECTSI3.190e-6363.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1S8_9PHAE2.010e-862.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1178contigP-lacustris_contig1178:45001..45838 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1178.1344.1mRNA_P-lacustris_contig1178.1344.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1178 45001..45838 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1178.1344.1 ID=prot_P-lacustris_contig1178.1344.1|Name=mRNA_P-lacustris_contig1178.1344.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=236bp
ARKKLLNDGKVLVPLFGSDQQAKEKTKSMHSCVEQYVQGKGCEVQKSMLM
RKHQRIKGQHRYMIPPEDMGIFASDADAMGETMAYVLQALDCSGYDRILV
EKSTCLVSLKKTSVQVLHRDQNLEKINDLLEGKVGAATRNNTRRQPPPYS
ALCSFQQGTSLRCVDRSHLSNSKEYEIGDSVRCPVPLGWGLLWHGLFVHA
GAECSVPWHARLHMYLKVLGCSDAATGKIDLAEAS*
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