prot_P-lacustris_contig1172.1319.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1172.1319.1
Unique Nameprot_P-lacustris_contig1172.1319.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length595
Homology
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BLAST of mRNA_P-lacustris_contig1172.1319.1 vs. uniprot
Match: A0A6H5JX10_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX10_9PHAE)

HSP 1 Score: 463 bits (1191), Expect = 9.190e-145
Identity = 284/530 (53.58%), Postives = 337/530 (63.58%), Query Frame = 0 
Query:   60 TPVYRAIGDETTERIGREVSQLVTSSRADECAKLEACLARIHEQYPTQLQKVIHRNTTFSFPQGHMLAAACSNGKVAAADLILRYGVDPNKQCPSGSTALDLAXXXXXXXXXKLLLALPNSLRGPMMVGGVRAPAAADTTMTPPSGTNALIHACRCTSEKAAEDMVDALLKANPALPLVAGEGVLALHAAAASGFPRVLERLLSFKGPLE-DQNEAQLVWLDNDNQCALQVAEKKCETEMKRERQLQASLSRT---------------------------------------------------------------------------------RGGKKKSQQQRWGANSGGXXXXXXXXXXXXXRGSGRKEQVLEGGWGCVVVLMRASKDGIRRGLHGVNSLKTDAVRDRMLSYLGLNALLTDIRLEREKTGKEGSNDDLTDAVSGYTMSIVTHVSALYKAIIKPPRNASQEPAQ-----LLAELLRPRDGLARTLDEHSCLTLLEILVNSNANPLVVRPLVLMLTEIA 502
            TPVYRAIGDETT++IGRE+S+LV SSR D+C+KLEA LA+ H+Q+P +LQ V+HRNTTF+FPQGHMLAAACSNGKVAAADL+LRYGV+PNKQCPSGSTAL LA         KLLL LP SLRG   V GV  P+ A   + P  G NALIHACRCT+EKAAE++V ALL+A+P+LPL A EG LALHAAAASGFPRVLERLL     L  DQ E QL W++NDN CALQVAEKKCETEM+RER+ QA +SR                                                                                                    XXXXXXX          ++ +VLEGGWGCVVVL+RAS +GIR  LHG  SLKTD VRDR+LS+LGLNAL+ DI  +R++  + G N D+ D +S YTMS++THVSA+YKA++K PR+A Q P Q     LL EL+RPRDGL R +D+ SCL LLEI+VNS ANP VVRPLVL+LTE+A
Sbjct:   58 TPVYRAIGDETTDKIGRELSELVMSSRPDDCSKLEALLAQTHKQHPKRLQTVLHRNTTFAFPQGHMLAAACSNGKVAAADLLLRYGVEPNKQCPSGSTALSLACYNGRTACVKLLLGLPGSLRG-TAVAGVGVPSRASPRVAPAYGANALIHACRCTNEKAAEEIVGALLEADPSLPLEAAEGALALHAAAASGFPRVLERLLKSNDELPGDQCETQLGWINNDNLCALQVAEKKCETEMQREREKQAQVSRAPRPQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSPPGGPAGWQEGEVLEGGWGCVVVLVRASGNGIRNALHGSLSLKTDVVRDRLLSFLGLNALVKDISKQRDEVEQAGGNADVADDLSDYTMSVLTHVSAMYKAVLKLPRSALQGPQQSTTSRLLVELIRPRDGLPRAVDDISCLVLLEIVVNSTANPQVVRPLVLLLTEVA 586
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BLAST of mRNA_P-lacustris_contig1172.1319.1 vs. uniprot
Match: D8LKA6_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKA6_ECTSI)

HSP 1 Score: 398 bits (1022), Expect = 7.350e-122
Identity = 224/395 (56.71%), Postives = 263/395 (66.58%), Query Frame = 0 
Query:   60 TPVYRAIGDETTERIGREVSQLVTSSRADECAKLEACLARIHEQYPTQLQKVIHRNTTFSFPQGHMLAAACSNGKVAAADLILRYGVDPNKQCPSGSTALDLAXXXXXXXXXKLLLALPNSLRGPMMVGGVRAPAAADTTMTPPSGTNALIHACRCTSEKAAEDMVDALLKANPALPLVAGEGVLALHAAAASGFPRVLERLLSFKGPL-EDQNEAQLVWLDNDNQCALQVAEKKCETEMKRERQLQASLSRTRGGKKKSQQQRWGANSGGXXXXXXXXXXXXXRGSGRKEQVLEGGWGCVVVLMRASKDGIRRGLHGVNSLKTDAVRDRMLSYLGLNALLTDIRLEREKTGKEGSNDDLTDAVSGYTMSIVTHVSALYKAIIKPPRNASQEPAQ 453
            TPV+RAIGDETT++IGREVS+LV SSR D+C+KLEA LA+ H+Q+P +LQ V+HRNTTFSFPQGHMLAAACSNGKVAAADL+LRYGV+PNKQCPSGSTAL LA         KLLL LP SLRGP  V GV  P+ A   + P  G NALIHACRCT+EKAAE++V ALL+A+P+LPL A EG LALHAAA SGFPRVLERLL     L +DQ E QL W++NDN CALQ                                                                 GGWGCVVVL+RAS +GIR  LHG  SLKTD VRDR+LS+LGLNAL+ DIR +R++  K G N D+ D  S YTMS++THVSA+YKA++K PR+A Q P Q
Sbjct:   59 TPVHRAIGDETTDKIGREVSELVMSSRPDDCSKLEALLAQTHKQHPKRLQTVLHRNTTFSFPQGHMLAAACSNGKVAAADLLLRYGVEPNKQCPSGSTALSLACYNGRTACVKLLLGLPGSLRGPA-VAGVGVPSRASPRVAPAYGANALIHACRCTNEKAAEEIVGALLEADPSLPLEAAEGALALHAAAVSGFPRVLERLLKSNDQLPDDQCETQLGWINNDNLCALQ-----------------------------------------------------------------GGWGCVVVLVRASGNGIRNALHGSLSLKTDVVRDRLLSFLGLNALVKDIRKQRDEVEKAGGNADVADDFSDYTMSVLTHVSAMYKAVLKLPRSALQGPQQ 387
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1172.1319.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JX10_9PHAE9.190e-14553.58HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LKA6_ECTSI7.350e-12256.71HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 204..237
e-value: 270.0
score: 9.2
coord: 154..183
e-value: 1.1
score: 18.3
coord: 121..150
e-value: 870.0
score: 5.5
coord: 241..270
e-value: 23.0
score: 13.9
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 98..311
e-value: 8.3E-22
score: 79.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 125..297
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 126..229
e-value: 3.6E-9
score: 37.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 126..273
score: 12.859
NoneNo IPR availablePANTHERPTHR24178FAMILY NOT NAMEDcoord: 51..297

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1172contigP-lacustris_contig1172:52822..60046 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1172.1319.1mRNA_P-lacustris_contig1172.1319.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1172 42401..60598 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1172.1319.1 ID=prot_P-lacustris_contig1172.1319.1|Name=mRNA_P-lacustris_contig1172.1319.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=595bp
MADDGDGAHGGGRGGRGGGNARGGGGSRNRRNRGGAARGRRVIILQDSSS
NNSTGSNSITPVYRAIGDETTERIGREVSQLVTSSRADECAKLEACLARI
HEQYPTQLQKVIHRNTTFSFPQGHMLAAACSNGKVAAADLILRYGVDPNK
QCPSGSTALDLACYNGKVACVKLLLALPNSLRGPMMVGGVRAPAAADTTM
TPPSGTNALIHACRCTSEKAAEDMVDALLKANPALPLVAGEGVLALHAAA
ASGFPRVLERLLSFKGPLEDQNEAQLVWLDNDNQCALQVAEKKCETEMKR
ERQLQASLSRTRGGKKKSQQQRWGANSGGSRGGRGGHSGGGGRGSGRKEQ
VLEGGWGCVVVLMRASKDGIRRGLHGVNSLKTDAVRDRMLSYLGLNALLT
DIRLEREKTGKEGSNDDLTDAVSGYTMSIVTHVSALYKAIIKPPRNASQE
PAQLLAELLRPRDGLARTLDEHSCLTLLEILVNSNANPLVVRPLVLMLTE
IASSSSAEAAPAASAASLHSQGKPRNMLPCGIAQQGVRPALGLRGPLSRP
GVLRGVAKRVLVHREGRQDATVRAARTARGRARGGPLREGRVAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom