prot_P-lacustris_contig1129.1038.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1129.1038.1
Unique Nameprot_P-lacustris_contig1129.1038.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length287
Homology
BLAST of mRNA_P-lacustris_contig1129.1038.1 vs. uniprot
Match: D7FVJ7_ECTSI (PFtsY, plastid signal recognition particle receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVJ7_ECTSI)

HSP 1 Score: 336 bits (861), Expect = 1.350e-109
Identity = 197/279 (70.61%), Postives = 212/279 (75.99%), Query Frame = 0
Query:    1 MMMLGL----FGASSLPCASAFASSAIVSSTASIAFVSRQRPASSTIDIAREHF------YVGSGAGSIATAVAKRRQAQQQCRGRNSTGGGMVMLFDFIKKRAQEGVEQTQNLVTAAQTGRLEEALKETSAYVKDRNSKFADGLEQSRLRFVGDLENLFGMTGPLEETLEKLEEALLQADIGATTSFQIIEDLRRTAKAEDRRLEPDDIKSVLRATLIQVLNGGIMPSSPGGADTAAITFVDPSVGGPSVLFFMGANGMGKTTTVGKVASRLREEGGK 269
            MMML L     GA+S P A AFA SA++SS AS AFVSR+   SS+ +   +                                        MVMLFDFIKKRAQEGVEQTQNLVTAAQTGRL+EALKETSAYVKDRN+KF+DGL QSRLRFVGDLENLFGM GPLEETLEKLEEALLQAD+GATTSFQIIEDLR TAKAEDRRLEPDDIKSVLRATLIQVLNGG MPS+ GG DTAAITF DPS+G PSVLFFMGANGMGKTTTVGKVASRLRE+GG+
Sbjct:    1 MMMLALGTALCGAASFPHAHAFAPSAMLSSAASNAFVSRRGFVSSSTESVEKRLTQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVMLFDFIKKRAQEGVEQTQNLVTAAQTGRLDEALKETSAYVKDRNAKFSDGLAQSRLRFVGDLENLFGMAGPLEETLEKLEEALLQADLGATTSFQIIEDLRNTAKAEDRRLEPDDIKSVLRATLIQVLNGGTMPSAEGGGDTAAITFADPSLGVPSVLFFMGANGMGKTTTVGKVASRLREDGGQ 279          
BLAST of mRNA_P-lacustris_contig1129.1038.1 vs. uniprot
Match: A0A6H5KTL2_9PHAE (SRP54 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL2_9PHAE)

HSP 1 Score: 311 bits (797), Expect = 6.690e-102
Identity = 165/187 (88.24%), Postives = 173/187 (92.51%), Query Frame = 0
Query:   83 MVMLFDFIKKRAQEGVEQTQNLVTAAQTGRLEEALKETSAYVKDRNSKFADGLEQSRLRFVGDLENLFGMTGPLEETLEKLEEALLQADIGATTSFQIIEDLRRTAKAEDRRLEPDDIKSVLRATLIQVLNGGIMPSSPGGADTAAITFVDPSVGGPSVLFFMGANGMGKTTTVGKVASRLREEGGK 269
            MVMLFDFIKKRAQEGVEQTQNLVTAAQTGRL+EALKETSA     N+KF+DGL QSRLRFVGDLENLFGMTGPLEETL KLEEALLQAD+GATTSFQIIEDLR TAKAEDRRLEPDDIKSVLRATLIQVLNGG MP + GG DTAAITF DPS+G PSVLFFMGANGMGKTTTVGKVASRLRE+GG+
Sbjct:    1 MVMLFDFIKKRAQEGVEQTQNLVTAAQTGRLDEALKETSA-----NAKFSDGLAQSRLRFVGDLENLFGMTGPLEETLGKLEEALLQADLGATTSFQIIEDLRNTAKAEDRRLEPDDIKSVLRATLIQVLNGGTMPPAEGGGDTAAITFADPSLGVPSVLFFMGANGMGKTTTVGKVASRLREDGGQ 182          
BLAST of mRNA_P-lacustris_contig1129.1038.1 vs. uniprot
Match: A0A835ZC86_9STRA (PFtsY, plastid signal recognition particle receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC86_9STRA)

HSP 1 Score: 170 bits (430), Expect = 2.550e-46
Identity = 92/187 (49.20%), Postives = 124/187 (66.31%), Query Frame = 0
Query:   85 MLFDFIKKRAQEGVEQTQNLVTAAQTGRLEEALKETSAYVKDRN-------SKFADGLEQSRLRFVGDLENLFGMTGPLEETLEKLEEALLQADIGATTSFQIIEDLRRTAKAEDRRLEPDDIKSVLRATLIQVLNGGIMPSSPGGADTAAITFVDPSVGGPSVLFFMGANGMGKTTTVGKVASRLR 264
            M+FDF KKRA EG++Q +N+   A  G+L EAL++T+AYVK R        +KF  GL +SR +F+GDL    G    L+ETL  LEE L+ +DIG+ T+ QII+ LR  A + + +LEP+D+  VLR TLI+VL G  +    G  + +AI F     G PSVLF MGANGMGKTTT+GK+A+RL+
Sbjct:    1 MVFDFFKKRATEGIKQVENIAGKAVEGKLGEALQDTAAYVKVRREADAENFAKFTQGLTKSREKFLGDLSKALGRGDTLDETLTGLEEVLMTSDIGSATTLQIIDALRDIAGSSESKLEPEDVNCVLRGTLIEVLGGNAVGPLEGANNPSAIKFAPADSGVPSVLFVMGANGMGKTTTIGKIAARLK 187          
BLAST of mRNA_P-lacustris_contig1129.1038.1 vs. uniprot
Match: A0A7S2BL25_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BL25_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.940e-44
Identity = 120/292 (41.10%), Postives = 164/292 (56.16%), Query Frame = 0
Query:    2 MMLGLFGASSLPCASAFASSAIVSSTASIAFVSRQRPASSTIDIAREHFYVGSGAGSIATAVAKRRQAQQQCRGRNS----TGGGMVMLFDFIKKRAQEGVEQTQNLVTAAQTGRLEEALKETSAYVKDRNSKFADGLEQSRLRFVGDLENLFGMTGPLEETLEKLEEALLQADIGATTSFQIIEDLRRTAKAEDRRLEPDDIKSVLRATLIQVLNG------------GIMPSSPGGADTA-----AITFVDPSV---GGPSVLFFMGANGMGKTTTVGKVASRLREEGGK 269
            ++ GLF  S+LPC              S A V+ QRPA S        F   SG G+    + ++   ++  R  +S    T     M+FDF + RA EG+EQ +N+ + A  G++ EA ++T+ YV   N KF DGL +SR + + +L++LFG    LEETLEKLEE L+ ADIG TT+ +I+ DLRRTAK  D RL+P+DIKSVLR  L+  L+G             +  ++    DT      AI F  P     G P+VLF +GANGMGKTTT+GK+A RLR E G+
Sbjct:   28 LLCGLF--STLPC--------------SHALVTPQRPAMS--------FRTTSG-GTFTGRILRKPHLEKSPRSPSSSHRCTAVPPTMIFDFFRDRATEGLEQIENIASKASQGKIGEAFEDTANYVSVTNEKFYDGLAKSRDQLISNLDSLFGGDMRLEETLEKLEELLMMADIGGTTTDEIMTDLRRTAK--DDRLDPEDIKSVLRGRLVATLDGRGGGDLASVVEASVDVANKENVDTGKNTSRAIAFASPEERANGMPTVLFVIGANGMGKTTTIGKLAHRLRNESGQ 292          
BLAST of mRNA_P-lacustris_contig1129.1038.1 vs. uniprot
Match: A0A4D9DHK9_9STRA (SRP54 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DHK9_9STRA)

HSP 1 Score: 158 bits (399), Expect = 4.110e-41
Identity = 94/200 (47.00%), Postives = 129/200 (64.50%), Query Frame = 0
Query:   80 GGGMVMLFDFIKKRAQEGVEQTQNLVTAAQTGRLEEALKETSAYVKDRN-------SKFADGLEQSRLRFVGDLENLFGMTGP--LEETLEKLEEALLQADIGATTSFQIIEDLRRTAKAEDRRLEPDDIKSVLRATLIQVLNGGIMPSSPGGADTAAITFVDPSVGG----PSVLFFMGANGMGKTTTVGKVASRLREE 266
            G   +M+FDFI+KRA+EG++Q QN+ T    G+  EAL +T++YVK R        +K  +GL +SR R +GDL+ +FG++    L +TL+KLEE L+ +DIGA T+ +II+DLR  AKAE  +LEPDD+KSVLR  LI+ L            D +     + S G     P VLF +GANGMGKTTT+GK+ASRL+ E
Sbjct:   69 GESHMMVFDFIRKRAEEGIQQVQNIATKTAEGKFVEALGDTASYVKKRQEIDAENLAKLQEGLAKSRQRLMGDLDVIFGVSEDVGLTKTLDKLEEVLMMSDIGAATTGEIIDDLRMVAKAE--KLEPDDVKSVLRLRLIEALTA---------KDRSMQLKKEASAGNGKSYPRVLFVIGANGMGKTTTIGKIASRLKNE 257          
BLAST of mRNA_P-lacustris_contig1129.1038.1 vs. uniprot
Match: W7U0S2_9STRA (Signal recognition particle-docking protein FtsY n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0S2_9STRA)

HSP 1 Score: 158 bits (399), Expect = 6.860e-40
Identity = 98/219 (44.75%), Postives = 134/219 (61.19%), Query Frame = 0
Query:   61 TAVAKRRQAQQQCRGRNSTGGGMVMLFDFIKKRAQEGVEQTQNLVTAAQTGRLEEALKETSAYVKDRN-------SKFADGLEQSRLRFVGDLENLFGMTGP--LEETLEKLEEALLQADIGATTSFQIIEDLRRTAKAEDRRLEPDDIKSVLRATLIQVLNGGIMPSSPGGADTAAITFVDPSVGG----PSVLFFMGANGMGKTTTVGKVASRLREE 266
            TA   RRQ +             +M+FDFI+KRA+EG++Q QN+ T    G+  EAL +T++YVK R        +K  +GL +SR R +GDL+ +FG++    L +TL+KLEE L+ +DIGA T+ +II+DLR  AKAE  +LEPDD+KSVLR  LI+ L            D +     + S G     P VLF +GANGMGKTTT+GK+ASRL+ E
Sbjct:   61 TASRSRRQGESH-----------MMVFDFIRKRAEEGIQQVQNIATKTAEGKFVEALGDTASYVKKRQEIDAENLAKLQEGLAKSRQRLMGDLDVIFGVSEDVGLTKTLDKLEEVLMMSDIGAATTGEIIDDLRMVAKAE--KLEPDDVKSVLRLRLIEALTA---------KDRSMQLKKEASAGNGKSYPRVLFVIGANGMGKTTTIGKIASRLKNE 257          
BLAST of mRNA_P-lacustris_contig1129.1038.1 vs. uniprot
Match: A0A7R9YG92_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YG92_9STRA)

HSP 1 Score: 146 bits (369), Expect = 3.260e-39
Identity = 87/196 (44.39%), Postives = 120/196 (61.22%), Query Frame = 0
Query:   83 MVMLFDFIKKRAQEGVEQTQNLVTAAQTGRLEEALKETSAYVKDRNS-------KFADGLEQSRLRFVGDLENLFGMT--GPLEETLEKLEEALLQADIGATTSFQIIEDLRRTAKAEDRRLEPDDIKSVLRATLIQVLNGGIMPSSPGGADTAAITFVDPSVGGPSVLFFMGANGMGKTTTVGKVASRLREEGGK 269
            + M+FDF +KRA EGV+Q +N+ +    G+L EAL +   YV +R         KF  GL +SR R + DLE++FG+    PLE  LE+LEE LLQAD+G +T+  +++D+R  AK     L+ D IK +LR  L+  L+         G  + A+T  DP    P+V F MGANGMGKTTT+GK+A RL EEGG+
Sbjct:   59 LQMVFDFFRKRAAEGVQQAKNIASKTAEGKLGEALSDAGDYVSERQKADRENLQKFTSGLAKSRDRLLSDLESVFGLQRDNPLEVALERLEEVLLQADLGTSTTMDVLDDVRALAKDAPEALDGDAIKGLLRERLVDTLDKA-------GDRSLALT-EDP----PTVFFVMGANGMGKTTTIGKLAHRLGEEGGQ 242          
BLAST of mRNA_P-lacustris_contig1129.1038.1 vs. uniprot
Match: A0A7S2EN25_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EN25_TRICV)

HSP 1 Score: 148 bits (373), Expect = 7.750e-38
Identity = 85/187 (45.45%), Postives = 118/187 (63.10%), Query Frame = 0
Query:   83 MVMLFDFIKKRAQEGVEQTQNLVTAAQTGRLEEALKETSAYVKDRNSKFADGLEQSRLRFVGDLENLFGMTGPLEETLEKLEEALLQADIGATTSFQIIEDLRRTAKAEDRRLEPDDIKSVLRATLIQVLNGGIMPSSPGGADTAAITFVDPSVGGPSVLFFMGANGMGKTTTVGKVASRLREEGGK 269
            + M+FDF +KR++EG  Q QNL  AA  G+L E L + + Y K+ N  FA GL +SR R + DLE  F   G   + LE+LE+AL++AD+G  T+  ++ ++R   +        DD++SVLR  LI+ L G   P + GG  T  + F +   G P+VLF MGANGMGKTTT+GK+ASRLR EGG+
Sbjct:   31 LSMVFDFFRKRSEEGFAQVQNLADAASRGKLGEGLLDAALYTKETNEAFAVGLAKSRNRLLYDLEAAFSGGG---DVLEELEDALIRADLGLGTAEDVLGEVRSLREDSTEIFSRDDLRSVLRGKLIEALEG---PIANGGM-TRNVKFAEEGEGCPTVLFVMGANGMGKTTTIGKLASRLRNEGGQ 210          
BLAST of mRNA_P-lacustris_contig1129.1038.1 vs. uniprot
Match: A0A7S1C0N2_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C0N2_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.530e-34
Identity = 81/188 (43.09%), Postives = 112/188 (59.57%), Query Frame = 0
Query:   81 GGMVMLFDFIKKRAQEGVEQTQNLVTAAQTGRLEEALKETSAYVKDRNSKFADGLEQSRLRFVGDLENLFGMTGPLEETLEKLEEALLQADIGATTSFQIIEDLRRTAKAED-RRLEPDDIKSVLRATLIQVLNGGIMPSSPGGADTAAITFVDPSVGGPSVLFFMGANGMGKTTTVGKVASRLREEG 267
            G  + LFDF ++++ EGV Q  NL  AA+ G L   L E + Y +  N  FA GL +SR R VGD+E LF      EE LE LE+ LL+AD+G  T+ +++E++R   ++ D +RL   D+KSV+R  L++VL  G         D       +   GG +V F MGANGMGKTTT+GK++ RLR EG
Sbjct:    3 GTSLHLFDFFQEKSAEGVAQLSNLADAARRGELGRGLAEAATYTRQSNDAFAAGLAKSRDRLVGDVERLFLGAAGGEEALEDLEDVLLRADLGVGTAEEVVEEVRELIRSGDGKRLSATDVKSVMRGRLVEVLETG-------AEDGRRALKFNEEEGGLTVWFVMGANGMGKTTTIGKLSRRLRVEG 183          
BLAST of mRNA_P-lacustris_contig1129.1038.1 vs. uniprot
Match: A0A7S1C396_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C396_9STRA)

HSP 1 Score: 139 bits (350), Expect = 4.430e-34
Identity = 81/188 (43.09%), Postives = 112/188 (59.57%), Query Frame = 0
Query:   81 GGMVMLFDFIKKRAQEGVEQTQNLVTAAQTGRLEEALKETSAYVKDRNSKFADGLEQSRLRFVGDLENLFGMTGPLEETLEKLEEALLQADIGATTSFQIIEDLRRTAKAED-RRLEPDDIKSVLRATLIQVLNGGIMPSSPGGADTAAITFVDPSVGGPSVLFFMGANGMGKTTTVGKVASRLREEG 267
            G  + LFDF ++++ EGV Q  NL  AA+ G L   L E + Y +  N  FA GL +SR R VGD+E LF      EE LE LE+ LL+AD+G  T+ +++E++R   ++ D +RL   D+KSV+R  L++VL  G         D       +   GG +V F MGANGMGKTTT+GK++ RLR EG
Sbjct:    3 GTSLHLFDFFQEKSAEGVAQLSNLADAARRGELGRGLAEAATYTRQSNDAFAAGLAKSRDRLVGDVERLFLGAAGGEEALEDLEDVLLRADLGVGTAEEVVEEVRELIRSGDGKRLSATDVKSVMRGRLVEVLETG-------AEDGRRALKFNEEEGGLTVWFVMGANGMGKTTTIGKLSRRLRVEG 183          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1129.1038.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVJ7_ECTSI1.350e-10970.61PFtsY, plastid signal recognition particle recepto... [more]
A0A6H5KTL2_9PHAE6.690e-10288.24SRP54 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835ZC86_9STRA2.550e-4649.20PFtsY, plastid signal recognition particle recepto... [more]
A0A7S2BL25_9STRA1.940e-4441.10Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A4D9DHK9_9STRA4.110e-4147.00SRP54 domain-containing protein n=1 Tax=Nannochlor... [more]
W7U0S2_9STRA6.860e-4044.75Signal recognition particle-docking protein FtsY n... [more]
A0A7R9YG92_9STRA3.260e-3944.39Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S2EN25_TRICV7.750e-3845.45Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S1C0N2_9STRA1.530e-3443.09Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S1C396_9STRA4.430e-3443.09Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013822Signal recognition particle SRP54, helical bundleSMARTSM00963SRP54_N_2coord: 131..212
e-value: 1.9E-4
score: 30.8
IPR013822Signal recognition particle SRP54, helical bundlePFAMPF02881SRP54_Ncoord: 156..207
e-value: 3.0E-8
score: 33.8
NoneNo IPR availableGENE3D3.40.50.300coord: 232..272
e-value: 8.9E-8
score: 33.7
NoneNo IPR availablePANTHERPTHR43134FAMILY NOT NAMEDcoord: 87..269
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..286
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.652
IPR042101Signal recognition particle SRP54, N-terminal domain superfamilyGENE3D1.20.120.140coord: 125..216
e-value: 2.1E-17
score: 65.0
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPFAMPF00448SRP54coord: 239..268
e-value: 3.1E-5
score: 23.7
IPR004390Signal-recognition particle receptor FtsYPANTHERPTHR43134:SF7CELL DIVISION PROTEIN FTSY HOMOLOG, CHLOROPLASTICcoord: 87..269
IPR036225SRP/SRP receptor, N-terminalSUPERFAMILY47364Domain of the SRP/SRP receptor G-proteinscoord: 128..203
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 233..269

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1129contigP-lacustris_contig1129:30821..36476 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1129.1038.1mRNA_P-lacustris_contig1129.1038.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1129 25081..36482 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1129.1038.1 ID=prot_P-lacustris_contig1129.1038.1|Name=mRNA_P-lacustris_contig1129.1038.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=287bp
MMMLGLFGASSLPCASAFASSAIVSSTASIAFVSRQRPASSTIDIAREHF
YVGSGAGSIATAVAKRRQAQQQCRGRNSTGGGMVMLFDFIKKRAQEGVEQ
TQNLVTAAQTGRLEEALKETSAYVKDRNSKFADGLEQSRLRFVGDLENLF
GMTGPLEETLEKLEEALLQADIGATTSFQIIEDLRRTAKAEDRRLEPDDI
KSVLRATLIQVLNGGIMPSSPGGADTAAITFVDPSVGGPSVLFFMGANGM
GKTTTVGKVASRLREEGGKGCYSRPRIPSGPRRWSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013822Signal_recog_particl_SRP54_hlx
IPR042101SRP54_N_sf
IPR000897SRP54_GTPase_dom
IPR004390SR_rcpt_FtsY
IPR036225SRP/SRP_N
IPR027417P-loop_NTPase