prot_P-lacustris_contig112.979.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig112.979.1
Unique Nameprot_P-lacustris_contig112.979.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length46
Homology
[Close]
BLAST of mRNA_P-lacustris_contig112.979.1 vs. uniprot
Match: A0A6H5K4Q0_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4Q0_9PHAE)

HSP 1 Score: 50.8 bits (120), Expect = 4.560e-6
Identity = 26/40 (65.00%), Postives = 30/40 (75.00%), Query Frame = 0 
Query:    1 MRAQIKQRKLRGKFPFRRRLCFGRQLGDLLSYLHSTSILG 40
            M  + KQ+KLR KF FR+RL +G QLGDLL YLHS SI G
Sbjct:  180 MIVEFKQKKLRAKFRFRKRLGYGLQLGDLLRYLHSESIPG 219
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig112.979.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K4Q0_9PHAE4.560e-665.00Protein kinase domain-containing protein n=2 Tax=E... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig112contigP-lacustris_contig112:192480..192919 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig112.979.1mRNA_P-lacustris_contig112.979.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig112 185194..193969 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig112.979.1 ID=prot_P-lacustris_contig112.979.1|Name=mRNA_P-lacustris_contig112.979.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=46bp
MRAQIKQRKLRGKFPFRRRLCFGRQLGDLLSYLHSTSILGLCRAS*
back to top