prot_P-lacustris_contig1118.962.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1118.962.1
Unique Nameprot_P-lacustris_contig1118.962.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length422
Homology
BLAST of mRNA_P-lacustris_contig1118.962.1 vs. uniprot
Match: D8LD63_ECTSI (Rhomboid-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD63_ECTSI)

HSP 1 Score: 612 bits (1577), Expect = 1.100e-217
Identity = 317/391 (81.07%), Postives = 345/391 (88.24%), Query Frame = 0
Query:    3 DDAELLRSLRREIGAPTRPAATVAPSRGAGTNSGXXXXXXXXXXXXXXXXIVGSG---------------GGVNSLSSIGLLRDAEEGRAEEDEAADGNGHDADDWGDRNMDGQEYGFVMFDPVWGKPDYPPGHHTTACEFCGVLCCPCLMGRDGWRGTRNRNVWRRIRKRAAIITSGIDIAAFVLSIVLNGGFQSMWGKIDSNPLLGPSAETLIALGAKHLTLIQEGQVWRLLTPVLLHGGVLHIFMNLTSQFRMGTFLEERWGTKNWLIVYWVGGLGGNLLSCVASPNKVGVGASGAIYAIMGGWLSHVICTWHEEDEFSKGAQLTQVVAYTILGMAASLAPIVDWAAHFGGLVIGILVGWSLFHRPLEAARMLREPLRRKLVRLQGKI 378
            DDAELLRSLRREIGAPTRPAA    SRGAG +  XXXXXXXXXXXXXXXX                    GGV++LSS+GLLRDAEEGR  + +A +  G   DDW D+NMDGQEYGFVMFDPVWGKPDYPPGHHTT C+FCGVLCCPCLMGRDGWRG+RNRNVWRRIRKRAAIITSG+DI AFVLSI++NGGFQSMWGK+DSNPLLGPS ETL+ALGAKHLTLIQEGQVWRLLTP+LLHGGVLHIFMNLTSQFRMGTFLEERWGT+NWLIVYWVGGLGGNLLSCVASP+KVGVGASGAIYAIMG WLSHV+CTW+EEDEF+KGAQLTQVV YT++GMAASLAPIVDWAAH GGLV GILVGW+LFH+P+E +RMLREPLRR+L RLQGKI
Sbjct:    4 DDAELLRSLRREIGAPTRPAAA---SRGAGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVHNLSSMGLLRDAEEGRGGDRDADNSGGGYDDDWEDQNMDGQEYGFVMFDPVWGKPDYPPGHHTTKCQFCGVLCCPCLMGRDGWRGSRNRNVWRRIRKRAAIITSGVDIVAFVLSIIINGGFQSMWGKVDSNPLLGPSIETLMALGAKHLTLIQEGQVWRLLTPILLHGGVLHIFMNLTSQFRMGTFLEERWGTRNWLIVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGAWLSHVLCTWNEEDEFAKGAQLTQVVLYTMVGMAASLAPIVDWAAHVGGLVTGILVGWALFHKPVEDSRMLREPLRRRLSRLQGKI 391          
BLAST of mRNA_P-lacustris_contig1118.962.1 vs. uniprot
Match: A0A7S2R6S9_9STRA (Rhomboid-like protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6S9_9STRA)

HSP 1 Score: 175 bits (443), Expect = 1.250e-46
Identity = 97/274 (35.40%), Postives = 147/274 (53.65%), Query Frame = 0
Query:   99 DGQEYGFVMFDPVWGKPDYPPGHHTTACEFCGVLCCPCL-MGR------DGWRGTRNRNVWRRIR--KRAAIITSGIDIAAFVLSIVLNGGFQSMWGKIDSNPLLGPSAETLIALGAKHLTLIQ-EGQVWRLLTPVLLHGGVLHIFMNLTSQFRMGTFLEERWGTKNWLIVYWVGGLGGNLLSCVASPNKVGVGASGAIYAIMGGWLSHVICTWH---EEDEFSKGAQLTQVVAYTILGMAASLAPIVDWAAHFGGLVIGILVGWSLFHRPLEA 359
            D QE    + DPVWGK +  PG   +  +      CPCL +GR       G+         R +R     +++ + + +A   ++I L+ G        + NP++GP A  L  LGAK+  LI    Q WRL TP+LLH G +H+ +N+  Q R+G  LE +WG   + I+Y   G    +LSC+A P+ +GVG+SGAI  I+G WL+ ++C W    EE+   + A L  V    ++ ++ SL P+VDWAAH GGL+ G ++G  LF    ++
Sbjct:  101 DAQEETLTLEDPVWGKLELAPGQRPSPTQIICFSLCPCLCIGRCCVKTPGGFYSCHPEKGARCLRFVLTLSVLLALVQVAMLAIAIALSDGLAPT----EQNPMVGPYATILDRLGAKNAALIAYRNQWWRLFTPMLLHAGFIHLAVNVLIQVRIGVILEYQWGIAIYTIIYITSGFLSAILSCIALPDSLGVGSSGAIMGILGAWLAEIVCAWSSTPEEELGQRSANLVLVFLNILITLSFSLVPLVDWAAHIGGLLAGWMMGVVLFGHKFQS 370          
BLAST of mRNA_P-lacustris_contig1118.962.1 vs. uniprot
Match: A0A7S2AL17_9DINO (Rhomboid-like protease (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2AL17_9DINO)

HSP 1 Score: 165 bits (418), Expect = 2.880e-44
Identity = 86/258 (33.33%), Postives = 137/258 (53.10%), Query Frame = 0
Query:  106 VMFDPVWGKPDYPPGHHTTACEFCGVLCCPCLMGRDGWRGTRNRNVWRRIRKRAAIITSGIDIAAFVLSIVLNGGFQSMWGKIDSNPLLGPSAETLIALGAKHLTLIQ-EGQVWRLLTPVLLHGGVLHIFMNLTSQFRMGTFLEERWGTKNWLIVYWVGGLGGNLLSCVASPNKVGVGASGAIYAIMGGWLSHVICTWHEEDEFS---KGAQLTQVVAYTILGMAASLAPIVDWAAHFGGLVIGILVGWSLFHRPLEA 359
             ++DP+WG+     G    AC+     CCPC M   G +    R  W++     +     + +   V+++ L GG  +    ++ NP++GP    L  LGAK+   I+   + WR+L+P+LLH G LH+  NL+ Q R G  LE  WG  +WL VY   G  G L  C+ SP  +GVG+SGA+  ++G W S ++ TW++        + AQ   VV   ++ +  S  P++D+AAH GGL++G  V  ++F   L++
Sbjct:   26 TLWDPLWGEIILAEGGRKRACQHFTFACCPCAMMGCGGQA---RRFWQKFLLSWSFGLGLLQVIMMVVAVALYGGHDA----VERNPMIGPHYHVLDKLGAKNAARIRWNWEWWRILSPMLLHAGWLHLVGNLSVQLRTGAMLEAAWGGASWLCVYVTSGAFGALAGCLMSPQHLGVGSSGALCGLLGAWASFILITWNQTSPVDIKLRNAQSFSVVLSMLVIIGLSFLPLMDFAAHVGGLLMGAAVAMAIFASRLQS 276          
BLAST of mRNA_P-lacustris_contig1118.962.1 vs. uniprot
Match: A0A7S1FIW9_NOCSC (Rhomboid-like protease n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FIW9_NOCSC)

HSP 1 Score: 158 bits (400), Expect = 2.230e-40
Identity = 88/262 (33.59%), Postives = 134/262 (51.15%), Query Frame = 0
Query:  107 MFDPVWGKPDYPPGHHTTACEFCGVLCCPCLMGRDGWRGTR-----NRNVWRRIRKRAAIITSGIDIAAFVLSIVLNGGFQSMWGKIDSNPLLGPSAETLIALGAKHLTLIQEGQVW-RLLTPVLLHGGVLHIFMNLTSQFRMGTFLEERWGTKNWLIVYWVGGLGGNLLSCVASPNKVGVGASGAIYAIMGGWLSHVICTWHE---EDEFSKGAQLTQVVAYTILGMAASLAPIVDWAAHFGGLVIGILVGWSLFHRPLEA 359
            ++DP+WG          +       + CP +M   G   +R      +  W+R     + + S +     V  I ++GG          NP++GP        GAK+   I+    W RLL+ V+LH G +HI  NL  Q R+G  LE  WG   WL++YWV G  G ++S V  PN +GVGASGAI  I+G W   ++CTW++    D+ ++ +Q   VV   +  +A S  P+VDWAAH GG+++G+ +G  LF   L++
Sbjct:  128 LWDPIWGDMTLKNEDEVSWNVRVLYIMCPMIMVGFGLGQSRLVHVDKKAAWKRCFLSWSFVLSVLQTGCLVAQITVDGGIVPF----KENPMVGPGWAIFDEWGAKNAAKIKYNHEWYRLLSAVMLHAGWIHIVSNLMVQLRLGIMLEVLWGHTCWLVIYWVSGAYGTMVSSVMMPNTLGVGASGAICGIVGAWSVFIVCTWNQTLPRDKMTRNSQFMAVVWSLVALVALSFIPMVDWAAHIGGVIMGMGLGAFLFGFRLQS 385          
BLAST of mRNA_P-lacustris_contig1118.962.1 vs. uniprot
Match: A0A812VT23_9DINO (Rhomboid-like protease n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A812VT23_9DINO)

HSP 1 Score: 156 bits (395), Expect = 4.780e-40
Identity = 87/263 (33.08%), Postives = 138/263 (52.47%), Query Frame = 0
Query:  105 FVMFDPVWGK---PDYPPGHHTTACEFCGVLCCPCLMGRDGWRGTRNRNVWRRIRKRAAIITSGIDIAAFVLSIVLNGGFQSMWGKIDSNPLLGPSAETLIALGAKHLT-LIQEGQVWRLLTPVLLHGGVLHIFMNLTSQFRMGTFLEERWGTKNWLIVYWVGGLGGNLLSCVASPNKVGVGASGAIYAIMGGWLSHVICTWHE---EDEFSKGAQLTQVVAYTILGMAASLAPIVDWAAHFGGLVIGILVGWSLFHRPLEAA 360
            + + DP+WG+    + P         FC   CCPC +   G      +  W +     ++I + + +A  V  I ++GG  S     + NP+LGP    L   G K+   ++ +G+ WRL +  +LH G +H+  NL  Q   G  LE  WG   WL+VY+V G+  NLLSCV  P+ +GVG+SG +  ++GGWLS +  TW++    D   + AQ+T +V   ++ +  S  P++D+AAH GGL++G      +F   L+ A
Sbjct:   88 YSVVDPLWGEVTTTEAPSAWFRLL--FC---CCPCCI--VGCSTKEAKRAWVKFLCSCSLILAVLQVAILVAVIAVDGGMVSY----EENPMLGPKFNRLDEAGGKNAAKILLQGEWWRLASATMLHAGWIHLAGNLVVQLHAGIQLEVIWGPTAWLVVYFVSGIYANLLSCVLHPDTIGVGSSGCLCGLIGGWLSFIFITWNQTLPSDIKMRNAQVTSIVLSILMVLVFSFLPLMDFAAHVGGLLMGTGTSMVMFGSRLQHA 339          
BLAST of mRNA_P-lacustris_contig1118.962.1 vs. uniprot
Match: A0A812XH88_9DINO (Rhomboid-like protease n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812XH88_9DINO)

HSP 1 Score: 154 bits (390), Expect = 1.160e-37
Identity = 86/261 (32.95%), Postives = 135/261 (51.72%), Query Frame = 0
Query:  105 FVMFDPVWGK---PDYPPGHHTTACEFCGVLCCPCLMGRDGWRGTRNRNVWRRIRKRAAIITSGIDIAAFVLSIVLNGGFQSMWGKIDSNPLLGPSAETLIALGAKHLT-LIQEGQVWRLLTPVLLHGGVLHIFMNLTSQFRMGTFLEERWGTKNWLIVYWVGGLGGNLLSCVASPNKVGVGASGAIYAIMGGWLSHVICTWHE---EDEFSKGAQLTQVVAYTILGMAASLAPIVDWAAHFGGLVIGILVGWSLFHRPLE 358
            + + DP+WG+    + P         FC   CCPC +   G      +  W +     + I + + +A  V  I ++GG  S     + NP+LGP    L   G K+   ++ +G  WRL +  +LH G +H+  NL  Q   G  LE  WG   WL+VY+V G+  NLLSCV  P+ +GVG+SG +  ++GGWLS +  TW++    D   + AQ+T +V   ++ +  S  P++D+AAH GGL++G      +F   L+
Sbjct:  356 YSVVDPLWGEVTTTEAPSAWFRLL--FC---CCPCCV--VGCSTKEAKRAWVKFLCSCSFILAVLQVAILVAVIAVDGGMVSY----EENPMLGPKFNRLDEAGGKNAAKILLQGDWWRLASATMLHAGWIHLAGNLVVQLHAGVQLEVIWGPTAWLVVYFVSGIYANLLSCVLHPDTIGVGSSGCLCGLIGGWLSFIFITWNQTLPSDIKMRNAQVTSIVLSILMVLVFSFLPLMDFAAHVGGLLMGTGTSMVMFGSRLQ 605          
BLAST of mRNA_P-lacustris_contig1118.962.1 vs. uniprot
Match: A0A813K155_POLGL (Rhomboid-like protease n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813K155_POLGL)

HSP 1 Score: 150 bits (378), Expect = 1.680e-37
Identity = 87/262 (33.21%), Postives = 133/262 (50.76%), Query Frame = 0
Query:  105 FVMFDPVWGKPDYPPGHHTTACEFCGVLCCPCLMGR----DGWRGTRNRNVWRRIRKRAAIITSGIDIAAFVLSIVLNGGFQSMWGKIDSNPLLGPSAETLIALGAKHLTLIQE-GQVWRLLTPVLLHGGVLHIFMNLTSQFRMGTFLEERWGTKNWLIVYWVGGLGGNLLSCVASPNKVGVGASGAIYAIMGGWLSHVICTWHEE---DEFSKGAQLTQVVAYTILGMAASLAPIVDWAAHFGGLVIGILVGWSLFHRPLE 358
            F ++DP+WG            C    + CCPC+       DG+R       WR      A +     +        L+GG   +    + NP++GP    L   GAK+   I+   + WRLL+ V+LH G LH+  NL  Q R G  LE  +G   WL++Y + G    L SCV +P+K+GVG+SGA+  ++G WLS ++ TW++    D  ++  Q   V    I+ +A+S  P++D+AAH GGL++GI +   LF   L+
Sbjct:  101 FQIWDPLWGDIKLTSSEAPGFCTRLLLNCCPCVFVSCRTDDGFRA------WRSFLLSWACLLGFAQVIXXXXXXXLSGGHMPL----EENPMIGPHYHALDPAGAKNAARIKVFDEWWRLLSAVMLHAGWLHLAGNLIIQLRTGAMLEVLFGHSAWLLIYIISGAYSELCSCVINPSKLGVGSSGALCGLVGAWLSFILITWNQTLPLDVKARNVQAFSVGFSIIIIVASSFLPLMDFAAHIGGLIMGISLAMVLFAGRLQ 352          
BLAST of mRNA_P-lacustris_contig1118.962.1 vs. uniprot
Match: A0A1Q9CX31_SYMMI (GTP-binding protein yptV4 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9CX31_SYMMI)

HSP 1 Score: 154 bits (389), Expect = 5.480e-37
Identity = 89/277 (32.13%), Postives = 140/277 (50.54%), Query Frame = 0
Query:  105 FVMFDPVWGK---PDYPPGHHTTACEFCGVLCCPCLMGRDGWRGTRNRNVWRRIRKRAAIITSGIDIAAFVLSIVLNGGFQSMWGKIDSNPLLGPSAETLIALGAKHLT-LIQEGQVWRLLTPVLLHGGVLHIFMNLTSQFRMGTFLEERWGTKNWLIVYWVGGLGGNLLSCVASPNKVGVGASGAIYAIMGGWLSHVICTWHE---EDEFSKGAQLTQVVAYTILGMAASLAPIVDWAAHFGGLVIGILVGWSLFHRPLEAARMLREPLRRKLVRL 374
            + + DP+WG+    + P         FC   CCPC +   G      +  W +     + I + + +A  V  I ++GG  S     + NP+LGP    L   G K+   ++ +G  WRL +  +LH G +H+  NL  Q   G  LE  WG   WL+VY+V G+  NLLSCV  P+ +GVG+SG +  ++GGWLS +  TW++    D   + AQ+T +V   ++ +  S  P++D+AAH GGL++G      +F   +    M+   +   LV L
Sbjct:  871 YSVVDPLWGEVTTTEAPSAWFRLL--FC---CCPCCV--VGCSTKEAKRAWVKFLCSCSFILAVLQVAILVAVIAVDGGMVSY----EENPMLGPKFNRLDEAGGKNAAKILLQGDWWRLASATMLHAGWIHLAGNLVVQLHAGVQLEVIWGPTAWLVVYFVSGIYANLLSCVLHPDTIGVGSSGCLCGLIGGWLSFIFITWNQTLPSDIKMRNAQVTSIVLSILMVLVFSFLPLMDFAAHVGGLLMGTGTSMVMFGSRMTGLGMIANGILSGLVLL 1136          
BLAST of mRNA_P-lacustris_contig1118.962.1 vs. uniprot
Match: A0A812U9R2_SYMMI (YPTV4 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812U9R2_SYMMI)

HSP 1 Score: 154 bits (388), Expect = 8.020e-37
Identity = 85/256 (33.20%), Postives = 133/256 (51.95%), Query Frame = 0
Query:  105 FVMFDPVWGK---PDYPPGHHTTACEFCGVLCCPCLMGRDGWRGTRNRNVWRRIRKRAAIITSGIDIAAFVLSIVLNGGFQSMWGKIDSNPLLGPSAETLIALGAKHLT-LIQEGQVWRLLTPVLLHGGVLHIFMNLTSQFRMGTFLEERWGTKNWLIVYWVGGLGGNLLSCVASPNKVGVGASGAIYAIMGGWLSHVICTWHE---EDEFSKGAQLTQVVAYTILGMAASLAPIVDWAAHFGGLVIGILVGWSLF 353
            + + DP+WG+    + P         FC   CCPC +   G      +  W +     + I + + +A  V  I ++GG  S     + NP+LGP    L   G K+   ++ +G  WRL +  +LH G +H+  NL  Q   G  LE  WG   WL+VY+V G+  NLLSCV  P+ +GVG+SG +  ++GGWLS +  TW++    D   + AQ+T +V   ++ +  S  P++D+AAH GGL++G      +F
Sbjct:  711 YSVVDPLWGEVTTTEAPSAWFRLL--FC---CCPCCV--VGCSTKEAKRAWVKFLCSCSFILAVLQVAILVAVIAVDGGMVSY----EENPMLGPKFNRLDEAGGKNAAKILLQGDWWRLASATMLHAGWIHLAGNLVVQLHAGVQLEVIWGPTAWLVVYFVSGIYANLLSCVLHPDTIGVGSSGCLCGLIGGWLSFIFITWNQTLPSDIKMRNAQVTSIVLSILMVLVFSFLPLMDFAAHVGGLLMGTGTSMVMF 955          
BLAST of mRNA_P-lacustris_contig1118.962.1 vs. uniprot
Match: A0A813C7R9_9DINO (Rhomboid-like protease n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813C7R9_9DINO)

HSP 1 Score: 153 bits (386), Expect = 8.480e-37
Identity = 85/256 (33.20%), Postives = 132/256 (51.56%), Query Frame = 0
Query:  105 FVMFDPVWGK---PDYPPGHHTTACEFCGVLCCPCLMGRDGWRGTRNRNVWRRIRKRAAIITSGIDIAAFVLSIVLNGGFQSMWGKIDSNPLLGPSAETLIALGAKHLT-LIQEGQVWRLLTPVLLHGGVLHIFMNLTSQFRMGTFLEERWGTKNWLIVYWVGGLGGNLLSCVASPNKVGVGASGAIYAIMGGWLSHVICTWHE---EDEFSKGAQLTQVVAYTILGMAASLAPIVDWAAHFGGLVIGILVGWSLF 353
            + + DP+WG+    + P         FC   CCPC +   G      +  W +     + I + + +A  V  I ++GG  S     + NP+LGP    L   G K+   ++  G  WRL +  +LH G +H+  NL  Q   G  LE  WG   WL+VY+V G+  NLLSCV  P+ +GVG+SG +  ++GGWLS +  TW++    D   + AQ+T +V   ++ +  S  P++D+AAH GGL++G      +F
Sbjct:  520 YSVVDPLWGEVTTTEAPSAWFRLL--FC---CCPCCV--VGCSTKEAKRAWVKFLCSCSFILAVLQVAILVAVIAVDGGMVSY----EENPMLGPKFNRLDEAGGKNAAKILLHGDWWRLASATMLHAGWIHLAGNLVVQLHAGVQLEVIWGPTAWLVVYFVSGIYANLLSCVLHPDTIGVGSSGCLCGLIGGWLSFIFITWNQTLPSDIKMRNAQVTSIVLSILMVLVFSFLPLMDFAAHVGGLLMGTGTSMVMF 764          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1118.962.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD63_ECTSI1.100e-21781.07Rhomboid-like protein n=1 Tax=Ectocarpus siliculos... [more]
A0A7S2R6S9_9STRA1.250e-4635.40Rhomboid-like protein n=1 Tax=Rhizochromulina mari... [more]
A0A7S2AL17_9DINO2.880e-4433.33Rhomboid-like protease (Fragment) n=1 Tax=Alexandr... [more]
A0A7S1FIW9_NOCSC2.230e-4033.59Rhomboid-like protease n=1 Tax=Noctiluca scintilla... [more]
A0A812VT23_9DINO4.780e-4033.08Rhomboid-like protease n=2 Tax=unclassified Symbio... [more]
A0A812XH88_9DINO1.160e-3732.95Rhomboid-like protease n=1 Tax=Symbiodinium sp. KB... [more]
A0A813K155_POLGL1.680e-3733.21Rhomboid-like protease n=1 Tax=Polarella glacialis... [more]
A0A1Q9CX31_SYMMI5.480e-3732.13GTP-binding protein yptV4 n=1 Tax=Symbiodinium mic... [more]
A0A812U9R2_SYMMI8.020e-3733.20YPTV4 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A813C7R9_9DINO8.480e-3733.20Rhomboid-like protease n=1 Tax=Symbiodinium necroa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 212..355
e-value: 5.0E-32
score: 111.0
IPR035952Rhomboid-like superfamilyGENE3D1.20.1540.10coord: 190..362
e-value: 7.6E-33
score: 115.6
IPR002610Peptidase S54, rhomboidPANTHERPTHR22936RHOMBOID-RELATEDcoord: 152..395
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 303..313
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 256..276
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 159..181
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 378..396
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 277..281
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 397..421
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 314..333
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 182..216
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..158
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 339..357
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 358..377
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 236..255
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 282..302
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 217..235
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 334..338
NoneNo IPR availableSUPERFAMILY144091Rhomboid-likecoord: 167..356
NoneNo IPR availableTMHMMTMhelixcoord: 159..181
NoneNo IPR availableTMHMMTMhelixcoord: 217..236
NoneNo IPR availableTMHMMTMhelixcoord: 374..396
NoneNo IPR availableTMHMMTMhelixcoord: 331..353
NoneNo IPR availableTMHMMTMhelixcoord: 256..273
NoneNo IPR availableTMHMMTMhelixcoord: 280..302

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1118contigP-lacustris_contig1118:26254..37722 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1118.962.1mRNA_P-lacustris_contig1118.962.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1118 25799..38640 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1118.962.1 ID=prot_P-lacustris_contig1118.962.1|Name=mRNA_P-lacustris_contig1118.962.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=422bp
MPDDAELLRSLRREIGAPTRPAATVAPSRGAGTNSGGGYAGGSGGGGGTS
RRIVGSGGGVNSLSSIGLLRDAEEGRAEEDEAADGNGHDADDWGDRNMDG
QEYGFVMFDPVWGKPDYPPGHHTTACEFCGVLCCPCLMGRDGWRGTRNRN
VWRRIRKRAAIITSGIDIAAFVLSIVLNGGFQSMWGKIDSNPLLGPSAET
LIALGAKHLTLIQEGQVWRLLTPVLLHGGVLHIFMNLTSQFRMGTFLEER
WGTKNWLIVYWVGGLGGNLLSCVASPNKVGVGASGAIYAIMGGWLSHVIC
TWHEEDEFSKGAQLTQVVAYTILGMAASLAPIVDWAAHFGGLVIGILVGW
SLFHRPLEAARMLREPLRRKLVRLQGKICMWMVVSSMLVLAYWAFFESTC
TMPVPGRHPSSKGASTRPHNL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022764Peptidase_S54_rhomboid_dom
IPR035952Rhomboid-like_sf
IPR002610Peptidase_S54_rhomboid