prot_P-lacustris_contig11.803.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig11.803.1
Unique Nameprot_P-lacustris_contig11.803.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length514
Homology
BLAST of mRNA_P-lacustris_contig11.803.1 vs. uniprot
Match: A0A6H5KU27_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KU27_9PHAE)

HSP 1 Score: 531 bits (1369), Expect = 2.890e-183
Identity = 355/528 (67.23%), Postives = 381/528 (72.16%), Query Frame = 0
Query:    1 MTMTDRTEEFRGAVKLFLPTVEVVNNSKEAAANRAHSDLGYRKMSEFLQLASSVAVGFEGTSKLIGRLNKLVGRKGFSNNPAAEISDVMKLFEEDMAGLQRDISSLQRHADGSSRGSPPANSQRQMHCAFIVATLRRSAQEHTKAFRDALLLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFGNGAMSDTGGPRRRPLRGRPVAIPPXXXXXXXXXXXEHNKGHKSKGSIGRGGIGPGLSSSNAAAGAVASALPFPSWNGSKMARNSGAGGTSGQGGSSWPPKPG-PSSWAAGHTSNASISNLSAGESGSGSGHSNGAVA-------------GKTKSNEPFGVGATAAPS-GNANGGVPPFGGGGTGGGRYGAAPPGAALPSTRATFRANGRATGLRKRPGREDGGEAEEESRRAAWQLQVQEDSKTRVDESHKARKRRKSTRAHVEKMIGELGQMFSRFSTMVAAQEEVVVHIEDDVEAAHAFAEEGQAHLAKYYQVMSGNRGIIIKVFIMLIVFIWVFLGLMR 513
            MTMTDRT+EF GAV  F PTV  VNNS EAA  RA +DLGYRK SEFLQLA+SVAVGFEGTS+LIGRL KLVGRKGFSNNPAAEISDVMKLFE DMAGLQ+DISSLQR+ADG +RGSPPANSQRQMHCAFIV TLRRSAQEHTKAFRDAL+LRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFG+                   A  P XXXXXXXXXX  NKGHK          GP         G  AS LPFPS NG   A     GGT   GGSSWP K   P+ W+A    N + +N S G  G G   + GA+               +T SN  F  G   AP+ G+ANG VPP  GGG+G   + AAPPG     T A+ R  GRATGLRKRPGREDGG+AEEESRRAAWQ+QVQEDSKTRVDESHK           VEKMIG+LG MFSRFSTMVAAQEEVV+HIEDDVEAAHAFAEEGQAHLAKYYQ+ SGNRGIIIKVFIMLIV IWVFLGLMR
Sbjct:    1 MTMTDRTKEFHGAVSAFRPTVTAVNNSGEAALIRAQTDLGYRKTSEFLQLAASVAVGFEGTSRLIGRLKKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQKDISSLQRYADGGTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDALMLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFGSSGXXXXXXXXXXXX----TANLPSXXXXXXXXXXXDNKGHKH---------GPRKG------GKAASVLPFPSGNGGTRA----GGGT---GGSSWPQKSAVPAPWSAEGGRNGNGNNCSTGV-GKGGYDAVGAMPRATEPAAXXXXXXXRTDSNGGFRAGPHTAPTFGSANGYVPPAAGGGSGR-AHAAAPPGFPPLRTEAS-RGGGRATGLRKRPGREDGGDAEEESRRAAWQVQVQEDSKTRVDESHK-----------VEKMIGDLGHMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFLGLMR 488          
BLAST of mRNA_P-lacustris_contig11.803.1 vs. uniprot
Match: A0A835Z5V3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5V3_9STRA)

HSP 1 Score: 115 bits (287), Expect = 2.640e-26
Identity = 70/184 (38.04%), Postives = 112/184 (60.87%), Query Frame = 0
Query:    3 MTDRTEEFRGAVKLFLPTVEVVNNSKEAAANRAHSDLGYRKMSEFLQLASSVAVGFEGTSKLIGRLNKLVGRKGFSNNPAAEISDVMKLFEEDMAGLQRDISSLQRHADGSS--RGSPPANSQRQMHCAFIVATLRRSAQEHTKAFRDALLLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLF 184
            M DRT EF+G ++       V++        R   +    + ++F +  S++A+  EGT+KLI +L +LVGRKG SN+P  EI+DV +LF+ DM  +Q+++S+LQ   DG S  RG+P   SQR  H  +++  L++ AQE   AF+ AL  R AV ++ N+R++ +S +R V  + Q++ PLF
Sbjct:    1 MIDRTAEFQGCIR-------VLHQHDGRPDQRPQYEAP--QPTDFTKAVSALALSLEGTAKLIEQLMRLVGRKGTSNDPTMEITDVSRLFKGDMDAVQQELSALQAFIDGRSGKRGAPAPGSQRHKHSLYMLDALKQLAQEQVAAFQAALKQRNAVMRELNDRRKVYSTTRSVGLSVQMNSPLF 175          
BLAST of mRNA_P-lacustris_contig11.803.1 vs. uniprot
Match: A0A835ZFW2_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW2_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.300e-24
Identity = 52/72 (72.22%), Postives = 61/72 (84.72%), Query Frame = 0
Query:  437 MIGELGQMFSRFSTMVAAQEEVVVHIEDDVEAAHAFAEEGQAHLAKYYQVMSGNRGIIIKVFIMLIVFIWVF 508
            MIGELG MFS+FS +VAAQEE VVHIEDDVE AH FA +G AHL++YYQ +SGNRGII+KV I+L  F+WVF
Sbjct:    1 MIGELGHMFSKFSALVAAQEETVVHIEDDVEMAHGFAVDGHAHLSRYYQTISGNRGIIVKVLILLAFFVWVF 72          
BLAST of mRNA_P-lacustris_contig11.803.1 vs. uniprot
Match: A0A7S2XXW7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXW7_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 9.160e-13
Identity = 44/106 (41.51%), Postives = 64/106 (60.38%), Query Frame = 0
Query:  408 QVQEDSKTRVDESHKARKRRKSTRAHVEKMIGELGQMFSRFSTMVAAQEEVVVHIEDDVEAAHAFAEEGQAHLAKYYQVMSGNRGIIIKVFIMLIVFIWVFLGLMR 513
            ++Q  SK RV+E+             +E  I E   MFS+ +TMVA Q E+V  I+DD+E A      G   L +YY ++SGNRG+IIK+FI L+VFI++F+ L +
Sbjct:   11 ELQTSSKQRVEEARS-----------IEATISEFATMFSKMATMVAQQGELVTRIDDDMELALGNVSAGHTELTRYYSIISGNRGLIIKIFITLMVFIFLFVVLFK 105          
BLAST of mRNA_P-lacustris_contig11.803.1 vs. uniprot
Match: I2CQ48_NANGC (t-SNARE coiled-coil homology domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQ48_NANGC)

HSP 1 Score: 73.2 bits (178), Expect = 4.270e-12
Identity = 40/75 (53.33%), Postives = 54/75 (72.00%), Query Frame = 0
Query:  434 VEKMIGELGQMFSRFSTMVAAQEEVVVHIEDDVEAAHAFAEEGQAHLAKYYQVMSGNRGIIIKVFIMLIVFIWVF 508
            VEK I ELGQ FSR + +VAAQ EVV+ I+DD+EAA    ++G A +  Y +++ GNR +I KVF +L+VFI VF
Sbjct:   38 VEKAIVELGQTFSRMAGLVAAQGEVVMRIDDDMEAALEDVQKGHAEMVNYLRIVKGNRAVIFKVFALLLVFIVVF 112          
BLAST of mRNA_P-lacustris_contig11.803.1 vs. uniprot
Match: F0Y6L6_AURAN (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6L6_AURAN)

HSP 1 Score: 72.0 bits (175), Expect = 5.870e-12
Identity = 41/84 (48.81%), Postives = 57/84 (67.86%), Query Frame = 0
Query:  425 KRRKSTRAHVEKMIGELGQMFSRFSTMVAAQEEVVVHIEDDVEAAHAFAEEGQAHLAKYYQVMSGNRGIIIKVFIMLIVFIWVF 508
            +RR  T  ++EK IG+LG++FSRFS++VA Q EVV  ++DDVE A    E G A L K  +V+ GNR + +KVF +LI  I +F
Sbjct:    7 RRRLDTAHNIEKEIGKLGEVFSRFSSLVAQQAEVVERLDDDVEGALGEVEMGHAELLKAQEVLRGNRALFLKVFAVLIALIVLF 90          
BLAST of mRNA_P-lacustris_contig11.803.1 vs. uniprot
Match: A0A7S3H3X9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3X9_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 9.830e-12
Identity = 37/73 (50.68%), Postives = 55/73 (75.34%), Query Frame = 0
Query:  433 HVEKMIGELGQMFSRFSTMVAAQEEVVVHIEDDVEAAHAFAEEGQAHLAKYYQVMSGNRGIIIKVFIMLIVFI 505
            +V+K IGEL QMFS+ + +V AQEE++  I+ D+++     +EGQ HL KY+Q +S NRG+IIKVF++LI F+
Sbjct:  223 NVQKTIGELAQMFSKMAVLVTAQEEMIQRIDSDLDSTITNVDEGQQHLLKYFQYISSNRGLIIKVFLILIFFV 295          
BLAST of mRNA_P-lacustris_contig11.803.1 vs. uniprot
Match: A0A6G0WSE7_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSE7_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 6.410e-11
Identity = 37/89 (41.57%), Postives = 61/89 (68.54%), Query Frame = 0
Query:  421 HKARKRRKSTRAHVEKMIGELGQMFSRFSTMVAAQEEVVVHIEDDVEAAHAFAEEGQAHLAKYYQVMSGNRGIIIKVFIMLIVFIWVFL 509
            H+  + R +   H+E  I E+G M+SR + ++A+QEE++  IEDD+  AHA  E G   L KY+  +S NR +I+K+F++L++FI++FL
Sbjct:  221 HRTAQARLNDAQHMEATISEIGGMYSRMTGLLASQEEMLGRIEDDMTTAHANVESGYEELMKYFSTVSSNRSLILKIFLILLLFIYLFL 309          
BLAST of mRNA_P-lacustris_contig11.803.1 vs. uniprot
Match: A0A485LIS1_9STRA (Aste57867_21905 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIS1_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.330e-10
Identity = 39/89 (43.82%), Postives = 62/89 (69.66%), Query Frame = 0
Query:  421 HKARKRRKSTRAHVEKMIGELGQMFSRFSTMVAAQEEVVVHIEDDVEAAHAFAEEGQAHLAKYYQVMSGNRGIIIKVFIMLIVFIWVFL 509
            H+  + R +   +VE MIGE+G M+SR + ++A QEE++  IEDD+  AH+  E G   L KY+  +S NR +I+K+F++L+VFI++FL
Sbjct:  237 HRTAQSRLNDAQNVEAMIGEIGGMYSRMTGLLANQEEMLGRIEDDMTTAHSNVEGGYEELMKYFSTVSSNRSLILKIFLVLLVFIYLFL 325          
BLAST of mRNA_P-lacustris_contig11.803.1 vs. uniprot
Match: W4GGU1_9STRA (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGU1_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.450e-10
Identity = 38/89 (42.70%), Postives = 59/89 (66.29%), Query Frame = 0
Query:  421 HKARKRRKSTRAHVEKMIGELGQMFSRFSTMVAAQEEVVVHIEDDVEAAHAFAEEGQAHLAKYYQVMSGNRGIIIKVFIMLIVFIWVFL 509
            H+  + R +   H+E  I E+G M+SR + ++A+QEE +  IEDD+  AHA  E G   L KY+  +S NR +IIK+F++L+VF ++FL
Sbjct:  238 HRTAQSRLNDAQHMEATIVEIGGMYSRMTGLLASQEETLGRIEDDMTTAHANVESGYDELMKYFSTVSSNRSLIIKIFVVLLVFTYLFL 326          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig11.803.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KU27_9PHAE2.890e-18367.23t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835Z5V3_9STRA2.640e-2638.04Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835ZFW2_9STRA1.300e-2472.22t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S2XXW7_9STRA9.160e-1341.51Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
I2CQ48_NANGC4.270e-1253.33t-SNARE coiled-coil homology domain-containing pro... [more]
F0Y6L6_AURAN5.870e-1248.81t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S3H3X9_9STRA9.830e-1250.68Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A6G0WSE7_9STRA6.410e-1141.57t-SNARE coiled-coil homology domain-containing pro... [more]
A0A485LIS1_9STRA1.330e-1043.82Aste57867_21905 protein n=1 Tax=Aphanomyces stella... [more]
W4GGU1_9STRA2.450e-1042.70t-SNARE coiled-coil homology domain-containing pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 89..109
NoneNo IPR availableGENE3D1.20.5.110coord: 409..512
e-value: 1.9E-12
score: 48.7
NoneNo IPR availablePANTHERPTHR19957:SF3SYNTAXIN-5coord: 3..181
NoneNo IPR availablePANTHERPTHR19957SYNTAXINcoord: 3..181
NoneNo IPR availablePANTHERPTHR19957:SF3SYNTAXIN-5coord: 397..509
NoneNo IPR availablePANTHERPTHR19957SYNTAXINcoord: 397..509
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 513..513
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..492
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 493..512
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 423..485
NoneNo IPR availableTMHMMTMhelixcoord: 492..511
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 409..483
e-value: 8.8E-5
score: 31.9
IPR000727Target SNARE coiled-coil homology domainPFAMPF05739SNAREcoord: 458..509
e-value: 2.6E-7
score: 30.5
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 421..483
score: 10.256
IPR010989SNARESUPERFAMILY47661t-snare proteinscoord: 44..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig11contigP-lacustris_contig11:27425..35119 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig11.803.1mRNA_P-lacustris_contig11.803.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig11 26834..35120 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig11.803.1 ID=prot_P-lacustris_contig11.803.1|Name=mRNA_P-lacustris_contig11.803.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=514bp
MTMTDRTEEFRGAVKLFLPTVEVVNNSKEAAANRAHSDLGYRKMSEFLQL
ASSVAVGFEGTSKLIGRLNKLVGRKGFSNNPAAEISDVMKLFEEDMAGLQ
RDISSLQRHADGSSRGSPPANSQRQMHCAFIVATLRRSAQEHTKAFRDAL
LLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFGNGAMSDTGGPRRRPL
RGRPVAIPPPPPPPAPEEDDEHNKGHKSKGSIGRGGIGPGLSSSNAAAGA
VASALPFPSWNGSKMARNSGAGGTSGQGGSSWPPKPGPSSWAAGHTSNAS
ISNLSAGESGSGSGHSNGAVAGKTKSNEPFGVGATAAPSGNANGGVPPFG
GGGTGGGRYGAAPPGAALPSTRATFRANGRATGLRKRPGREDGGEAEEES
RRAAWQLQVQEDSKTRVDESHKARKRRKSTRAHVEKMIGELGQMFSRFST
MVAAQEEVVVHIEDDVEAAHAFAEEGQAHLAKYYQVMSGNRGIIIKVFIM
LIVFIWVFLGLMR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
IPR010989SNARE