prot_P-lacustris_contig1085.710.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1085.710.1
Unique Nameprot_P-lacustris_contig1085.710.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length600
Homology
BLAST of mRNA_P-lacustris_contig1085.710.1 vs. uniprot
Match: D8LI26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI26_ECTSI)

HSP 1 Score: 636 bits (1640), Expect = 1.620e-220
Identity = 364/618 (58.90%), Postives = 429/618 (69.42%), Query Frame = 0
Query:    1 MSSASDSHYRSERLDKVGQPAP-FATFTSSGSSIDAAFRDIGRMVTAAVGEGTKQQEGTRCAMAVVFFSGGECVDSPQDSQHNLVLQEDPARIEGALGRLHDSLPLVSDIIASPARATSVSHEQEQDVCPRDKPSAAVTATLALFHSPGLDVRPFVVHPARELGRHGRRLLQEDEIGSYVGESLERSACHRDDAWR-------GGGSVSYGLHRSVCLAFGGGMGDSGPRSGGGLCIANLRRLNGIXXXXXXXXXXXXXNGASY-CPLVSSVATTG-PVFASVRDPVSKKRVTVAAGVVGAVLTSLPDSEASFHLVHAGDDVAIRGSQFRVASVRDGIIAEVVPVELK-APAATPSALED---MAGTRWGGGVSPWERPRWPCGVISAAEWCKEVVVSSTRFEKFAMQSALGVGILRRAGVRDEAT---HDRGAPAGVARNLPALGCLPVMKVNADGSISVAVDG-GARDERRGERPGAPAKENCRLRAGDLCDIRAMGVVASLQATSDAYSWLRVARLSAMIEGTDVGGGEGSCRSARVPAFQGCLSVGSRARFSPGTEAESCEELVRVAAGHGS-CQAVGMVGDTQLVSVDNVMMTCSSDVGMASLYVCGGVGENQ 599
            M SASD  YR   L+K+G+PAP FATFTSS SS+DA FRD+ R+V A VG+  +QQ+  RCAMA+V+FS  +        +H  VLQ+D   IE AL RLHDSLP V D+IASPARAT+VS + +      ++P+AAVTATLALFH+PGLD RPFV++PARELG HG RLLQEDEIG+YVGESLERSA       +       GG S   G HR++CLAF GG G +        C + L RLNGI             + +S  CPLVS+VA  G P +ASVRDP S+KRVTVAA  VGA+LT LPDSEAS HLVHAG+D+A+RGSQFRVASV  G IAEVVPVE K   AAT     D     G   G G S W+RPRWPCGVISAAEWCK+VV +STRFEK A+QSALGVG+L+RAG R+ A       G PAGVARNLPA GCL V +V AD SIS+A  G G +D+RR    G  A   C +R GDLCDIRA+GV+A++QA  DAYSWLR+ARLS +I+G        S  +A  P F GCL+ G+RAR +PG EAESCEELVRVAAGHGS C   GMVGD QLVSVDNVMMTCS  VGM+S+YVCG  GE +
Sbjct:   30 MISASDPQYRPVGLEKIGKPAPPFATFTSSSSSVDATFRDLARIVIAEVGDSMEQQQQQRCAMAIVYFSREDEASLQDPMRH--VLQDDAGEIEIALARLHDSLPFVDDVIASPARATTVSQKNQNQGARNEEPAAAVTATLALFHNPGLDARPFVLNPARELGLHGDRLLQEDEIGAYVGESLERSASRYGGGEKVSQAVEAGGSSGPRGYHRTMCLAFSGGEGGAVESEPSDPCTSTLHRLNGILGDAGRRESGAGSSSSSSRCPLVSTVAAAGYPAYASVRDPDSRKRVTVAAEAVGAILTCLPDSEASLHLVHAGNDIALRGSQFRVASVWGGDIAEVVPVESKQTEAATGVPTLDGGFAGGCGAGAGDSLWQRPRWPCGVISAAEWCKQVVSASTRFEKLAIQSALGVGVLQRAGAREGAAALGQAGGTPAGVARNLPAHGCLSVTEVKADESISLARSGRGEQDDRR-RGDGGSAGVECGVRPGDLCDIRAIGVMAAMQAEQDAYSWLRIARLSVLIQGATGDREASSATAAAAPVFHGCLTAGTRARCTPGAEAESCEELVRVAAGHGSLCPTAGMVGDAQLVSVDNVMMTCSHGVGMSSVYVCGVAGEQE 644          
BLAST of mRNA_P-lacustris_contig1085.710.1 vs. uniprot
Match: A0A6H5KMN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN4_9PHAE)

HSP 1 Score: 528 bits (1359), Expect = 1.160e-179
Identity = 302/504 (59.92%), Postives = 353/504 (70.04%), Query Frame = 0
Query:  118 SVSHEQEQDVCPRDKPSAA---VTATLALFHSPGLDVRPFVVHPARELGRHGRRLLQEDEIGSYVGESLERSACHRDDAWR-------GGGSVSYGLHRSVCLAFGGGMGDSGPRSGGGLCIANLRRLNGIXXXXXXXXXXXXXNGASY--CPLVSSVATTG-PVFASVRDPVSKKRVTVAAGVVGAVLTSLPDSEASFHLVHAGDDVAIRGSQFRVASVRDGIIAEVVPVELK---APAATPSALEDMAG-TRWGGGVSPWERPRWPCGVISAAEWCKEVVVSSTRFEKFAMQSALGVGILRRAGVRDEAT---HDRGAPAGVARNLPALGCLPVMKVNADGSISVAVDG-GARDERRGERPGAPAKENCRLRAGDLCDIRAMGVVASLQATSDAYSWLRVARLSAMIEGTDVGGGEGSCRSARVPAFQGCLSVGSRARFSPGTEAESCEELVRVAAGHGS-CQAVGMVGDTQLVSVDNVMMTCSSDVGMASLYVCGGVGENQ 599
            SVS + ++     +KP+A    VTATLA FH+PGLD RPFV+HPARELG HG RLLQEDEIG+YVGESLERSA   D           GGGS + G HR++CLAF GG G +       LC + L RLNGI             + +S   CPLVS+VA  G P +ASVRDP S++RVTVAA  VGA+LT LPDSEAS HLVHAG+D+A+RGSQFRVASV  G IAEVVP+E K   A  A P+     AG    G G S W+RPRWPCGVISAAEWCK+VV +STRFEKFAMQSALG+G+L+RAG R+ A       GAPAGVARNLPA G L V +V  D SIS+A  G G +D+RR    G  A E C +R GDLCDIRA+GV+A++QA  DAYSWLR+ARLSA+I+G        S  +A  P FQGCL+ G+RAR +PG EAESCEELVRVAAGHGS C   GMVGD QLVSVDNVMMTCS  VGM+S+YVCGG GE +
Sbjct:   30 SVSQKNQEQGAGNEKPAAVTVTVTATLAFFHNPGLDARPFVLHPARELGLHGDRLLQEDEIGAYVGESLERSASRHDGGEEVSHGVEAGGGSGARGHHRTMCLAFSGGGGGAVGSEPSDLCTSTLHRLNGILGDAGRRKSGAGSSSSSSSRCPLVSTVAAAGYPAYASVRDPGSRERVTVAAEAVGAILTCLPDSEASLHLVHAGNDIALRGSQFRVASVSGGDIAEVVPLESKQTEAATAVPTLDGGFAGGCGAGAGDSLWQRPRWPCGVISAAEWCKQVVSASTRFEKFAMQSALGIGVLQRAGAREGAAALGQAGGAPAGVARNLPAHGYLSVTEVKTDESISLAHGGRGEQDDRRRGDGGRAAAE-CGVRLGDLCDIRAIGVMAAMQAEQDAYSWLRIARLSALIQGATGDREASSATAAAAPVFQGCLTAGTRARCAPGAEAESCEELVRVAAGHGSLCPTAGMVGDAQLVSVDNVMMTCSHGVGMSSVYVCGGAGEQE 532          
BLAST of mRNA_P-lacustris_contig1085.710.1 vs. uniprot
Match: A0A6H5KUX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUX6_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 2.120e-20
Identity = 63/119 (52.94%), Postives = 75/119 (63.03%), Query Frame = 0
Query:    1 MSSASDSHYRSERLDKVGQPAP-FATFTSSGSSIDAAFRDIGRMVTAAVGEGTKQQEGTR--------CAMAVVFFSGGECVDSPQDSQHNLVLQEDPARIEGALGRLHDSLPLVSDII 110
            M SASD  YR   L+K+G+PAP FATFTSS SS+DA FRD+ R+VTA VG+  +Q             CA+AVV+FS  E   S QD     VLQ+D   IE AL RLHDSLP V DI+
Sbjct:   30 MISASDPQYRPVGLEKIGKPAPPFATFTSSSSSVDATFRDLARIVTAEVGDSMEQXXXXXXXXXXXXXCAIAVVYFSK-EDEASLQDPMCR-VLQDDAGEIESALARLHDSLPFVDDIV 146          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1085.710.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LI26_ECTSI1.620e-22058.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KMN4_9PHAE1.160e-17959.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUX6_9PHAE2.120e-2052.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1085contigP-lacustris_contig1085:6098..10982 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1085.710.1mRNA_P-lacustris_contig1085.710.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1085 6029..11897 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1085.710.1 ID=prot_P-lacustris_contig1085.710.1|Name=mRNA_P-lacustris_contig1085.710.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=600bp
MSSASDSHYRSERLDKVGQPAPFATFTSSGSSIDAAFRDIGRMVTAAVGE
GTKQQEGTRCAMAVVFFSGGECVDSPQDSQHNLVLQEDPARIEGALGRLH
DSLPLVSDIIASPARATSVSHEQEQDVCPRDKPSAAVTATLALFHSPGLD
VRPFVVHPARELGRHGRRLLQEDEIGSYVGESLERSACHRDDAWRGGGSV
SYGLHRSVCLAFGGGMGDSGPRSGGGLCIANLRRLNGILGDAGRRAKGSL
CNGASYCPLVSSVATTGPVFASVRDPVSKKRVTVAAGVVGAVLTSLPDSE
ASFHLVHAGDDVAIRGSQFRVASVRDGIIAEVVPVELKAPAATPSALEDM
AGTRWGGGVSPWERPRWPCGVISAAEWCKEVVVSSTRFEKFAMQSALGVG
ILRRAGVRDEATHDRGAPAGVARNLPALGCLPVMKVNADGSISVAVDGGA
RDERRGERPGAPAKENCRLRAGDLCDIRAMGVVASLQATSDAYSWLRVAR
LSAMIEGTDVGGGEGSCRSARVPAFQGCLSVGSRARFSPGTEAESCEELV
RVAAGHGSCQAVGMVGDTQLVSVDNVMMTCSSDVGMASLYVCGGVGENQ*
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