prot_P-lacustris_contig1083.706.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1083.706.1
Unique Nameprot_P-lacustris_contig1083.706.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length936
Homology
BLAST of mRNA_P-lacustris_contig1083.706.1 vs. uniprot
Match: D7FQ17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ17_ECTSI)

HSP 1 Score: 535 bits (1377), Expect = 3.500e-161
Identity = 425/966 (44.00%), Postives = 512/966 (53.00%), Query Frame = 0
Query:    1 MRHVLSSVLSACVAVFTTLLYQWWLTPQVQQHDNTAAVPPKIGSKDQQLPSSNTYPPSPTTVNLAQALSLGRVLLSRGEYEEAALVYLVAASAAATVSGIAGNAGTAHEHGEAKHGLGLALLATGRTADALEACREAERLDPHFAAASAGIGAVLTELGDTGGALTALRHAADKADRGGXXXXXXXXXXXXXXXXRGRLGATLLAAGDVDEAIAVLTTVELEMRRAGAAGDPHVAYNLGVAWQTKGETDKAIAAYSRAADLAPTLAPPRVNLGAQLLQSGRLSEAEAVLWSAVELACXXXXXXXXXXXXXXXXXXXXXXXDQALESYSRAVRSGAGRSSLMHIAKLHQKLGQPEHALEACRRCVVR-GDSLDTSPLLMAGLILESLGNIEAAADHFAKVVQQDAESIEATMHLGTCQQRLGRHHEALAS-----FVAASRLEP------------------ENPVIYELVLATVSEVKRAL-GGDAHHNRADRVDDGNSEREGQDAVGTFGKEEFPGRVAKQSKETQSVCVEQAGQRPAASDDGIVAGEAAPLTQAEMILEERALVDPHIPGTGGSGAAVAADPADGILLPDDSSPDGVIDVQAS-GLGGSDRMTVASSAVPEHARSVAAGNAGGKPTSVGENNNLDGGGLETSAAGVHSQATXXXXXXXATSVLAEAASLDSVRIEDELATERYGNTGLGVAVNNADQGTKAPVERVKGLVLPPTSGEDIPYGNGTIGSAMAVDLGEAA--------ATVDTETKPKSHQEEEGESGTMVYSWDVSVEEEGEVEERGWLSGTIVPITDAERGFPSPPLKNAKGEQVADDAYYADKKSDD----------SVGEGEEDPRGDHMARSDPVADLGRPVAPSIVKAHDEVVIGEDDGTTISLEHDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELAA-HAETQGTKTLGDSSVDEVVDGLKA 921
            ++  L+S LSAC+AVFTTLLYQ W +P  Q       V  KI  + +   S +T PP PTTV+LAQAL LGRVLLSRGE+EEAALVY VAASAAA V        +  EHGEA+HGLGLALLATGR  +AL ACREAERLDP    A++ IGA+LT+ GD  GALTALRHAADK +RG                  GRLGA LLAAG+VDEAI VLT VELE RRAG  GDPH AYNLGVAWQTKGET+KAI AYSRA DLAPTLA PRVNLGAQLLQSGRL+EAEAVL SA E A XXXXXXXXXXXXXXXXXXXXXX ++ALESYSRAV+SGAGR SL+HIAKLH +LGQ E A EACRR ++  GDSLD SPLL+ G+ILESLGN+  AADHF+KVV QDAE++EATMHLG CQQRLG+HHE  +      F   +R +P                    PVI +  L  V   +RA+  G     R    + G                      A+ S+ + ++     G+  A + D                                   A  A+PAD  L+  D S DG+I  Q S G+GG +   +A                            +DG GL T     H++ T        +S  A+AA LDS  +E+ELA     N G  VA +  +QGT   +E+ +  VLP  SG ++P  N                       AT+  +    S + E GE G  V   +V V EE         +G  VP T AER F SPPL +A GEQ  D A  AD + DD          SV  G +      +A  DPVAD+  P  PS+  A  + V G+       L +D+                                 E A    ET+G +   DS   EVVDG+ A
Sbjct:    2 LKSALTSALSACLAVFTTLLYQQWASPSPQLQQQHVPVATKIDREQELAGSPSTAPPWPTTVDLAQALGLGRVLLSRGEHEEAALVYRVAASAAAAVD-------SNREHGEAQHGLGLALLATGRPEEALVACREAERLDPDLPTATSCIGAILTDAGDIAGALTALRHAADKTERGEVTAGLWRDAEGTADTIHGRLGAALLAAGEVDEAIEVLTRVELEARRAG--GDPHAAYNLGVAWQTKGETEKAIVAYSRATDLAPTLAAPRVNLGAQLLQSGRLAEAEAVLLSAAERAXXXXXXXXXXXXXXXXXXXXXXXPEEALESYSRAVQSGAGRPSLVHIAKLHHELGQLEQAREACRRAMLEEGDSLDASPLLVTGVILESLGNVGEAADHFSKVVHQDAENVEATMHLGACQQRLGQHHEGPSGKPGRCFCLRNRKKPLPVNGFKTTYVYPAFESYTAPVIVKGGLRDVQPFERAICTGHWLVYRTPPAETG---------------------AAEMSQVSTALACFGGGEGDAEAKD-----------------------------------AAVANPADETLVSHDPSTDGIIGAQPSEGIGGGEDEGIAMV--------------------------VDGNGLATGTLETHAEGTPARSSGTESSAPAKAAYLDSDIVEEELAARDDDNIGSTVAGSIGNQGTADDIEQGEKHVLP--SGTELPLPNXXXXXXXXXXXXXXXXXXXXXXLATLKNKLGSSSKEGEGGERGPAVPGLEVPVVEEXXXXXERQANGRTVPATAAEREFASPPLNDANGEQTPDGAADADNEEDDGLTGLVEENGSVDGGSDSFEEGDIATRDPVADVIHPAEPSLASAKSDTVSGDGHDIATRLGNDNPVGTEDDVTAPAGGSVDAVSEKSVDEEAVHTLGEKAVVQGETEGAEARRDSHEQEVVDGVGA 874          
BLAST of mRNA_P-lacustris_contig1083.706.1 vs. uniprot
Match: A0A6H5KCW1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCW1_9PHAE)

HSP 1 Score: 303 bits (777), Expect = 3.190e-83
Identity = 176/302 (58.28%), Postives = 208/302 (68.87%), Query Frame = 0
Query:  244 TKGETDKAIAAYSRAADLAPTLAPPRVNLGAQLLQSGRLSEAEAVLWSAVELACXXXXXXXXXXXXXXXXXXXXXXXDQALESYSRAVRSGAGRSSLMHIAKLHQKLGQPEHALEACRRCVVR-GDSLDTSPLLMAGLILESLGNIEAAADHFAKVVQQDAESIEATMHLGTCQQRLGRHHEALASFVAASRLEPENPVIYELVLATVSEVKRALGGDAHHNRADRVDDGNSEREGQDAVGTFGKEEFPGRVAKQSKETQSVCVEQAGQRPAASDDGIVAGEAAPLTQAEMILEERALVDPH 544
            T GET+KAI AYSRAADLAPTLA PRVNLGAQLLQSGRL+EAE VL SA E A                        ++ALE YSRAVRSGAGR SL+HIAKLH +LG+ E A EACR+ ++  GDSLD SPLL+ GLILESLGN+  AADHF KVV QDAE++EATMHLG CQQRLG+HHEALASF+AASRL+P+NPVIYE +L+TVS+ KRA G +   N    V D N E EG  A     +E  P  V +Q+   + V VE+AG R   S+DG+VA EA    Q+   LEE+  +DP 
Sbjct:    6 TPGETEKAIVAYSRAADLAPTLAAPRVNLGAQLLQSGRLAEAEVVLLSAAERARDDPISLAATYSNLGAVLKRSEKPEEALEYYSRAVRSGAGRPSLVHIAKLHHELGRSEQAREACRKAMLEEGDSLDASPLLVTGLILESLGNVGEAADHFTKVVHQDAENLEATMHLGACQQRLGQHHEALASFLAASRLQPDNPVIYESLLSTVSDAKRATGKEVDDNENGDVGDRNPEPEGHVAADALDEETSPELVVEQAGSAKFVDVERAGGRQEGSNDGVVAVEADLAAQSTGGLEEQDSLDPQ 307          
BLAST of mRNA_P-lacustris_contig1083.706.1 vs. uniprot
Match: A0A6H5KFC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFC6_9PHAE)

HSP 1 Score: 251 bits (642), Expect = 1.120e-73
Identity = 147/245 (60.00%), Postives = 169/245 (68.98%), Query Frame = 0
Query:    1 MRHVLSSVLSACVAVFTTLLYQWWLTPQVQQHDNTAAVPPKIGSKDQQLPSSNTYPPSPTTVNLAQALSLGRVLLSRGEYEEAALVYLVAASAAATVSGIAGNAGTAHEHGEAKHGLGLALLATGRTADALEACREAERLDPHFAAASAGIGAVLTELGDTGGALTALRHAADKADRGGXXXXXXXXXXXXXXXXRGRLGATLLAAGDVDEAIAVLTTVELEMRRAGAAGDPHVAYNLGVAWQTK 245
            +R  L+S LSAC+AVF TLLYQ W  P  Q       V  K+  + +   S +T  PSPTTV+LAQAL LGRVLLSRGE+EEAALVY VAASAAA +        +  EHGEA+HGLGLALLATGR  +AL ACREAERLDP    A++ IGA+LT+ G+  GALTALRHAA+KA+R G                 GRLGA LLAAG+VDEAI VLT VEL+ RRAG  GDPH AYNLGVAWQTK
Sbjct:    2 LRSALTSTLSACLAVFATLLYQQWARPSPQLQQQHVTVATKVDREQELAGSPSTAAPSPTTVDLAQALGLGRVLLSRGEHEEAALVYRVAASAAAAID-------SNREHGEAQHGLGLALLATGRPEEALAACREAERLDPDLPTATSCIGAILTDAGNIAGALTALRHAAEKAERAGVTAGLWRDAEGTADTIHGRLGAALLAAGEVDEAIEVLTRVELDARRAG--GDPHAAYNLGVAWQTK 237          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1083.706.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FQ17_ECTSI3.500e-16144.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCW1_9PHAE3.190e-8358.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFC6_9PHAE1.120e-7360.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 304..337
e-value: 0.14
score: 21.3
coord: 232..265
e-value: 0.0068
score: 25.6
coord: 266..299
e-value: 180.0
score: 4.0
coord: 338..370
e-value: 230.0
score: 2.9
coord: 111..144
e-value: 0.0045
score: 26.2
coord: 406..439
e-value: 0.17
score: 21.0
coord: 145..178
e-value: 420.0
score: 0.7
coord: 372..405
e-value: 20.0
score: 12.3
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 372..405
score: 7.169
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 266..299
score: 5.222
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 304..337
score: 9.293
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 406..439
score: 9.116
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 232..265
score: 10.03
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 111..144
score: 7.906
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 58..192
e-value: 3.3E-12
score: 48.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 193..376
e-value: 2.2E-27
score: 97.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 377..462
e-value: 4.0E-10
score: 41.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 68..217
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 199..443
NoneNo IPR availablePFAMPF13432TPR_16coord: 199..264
e-value: 0.0018
score: 18.9
coord: 117..175
e-value: 0.0016
score: 19.1
coord: 309..362
e-value: 0.0018
score: 18.8
NoneNo IPR availablePANTHERPTHR45586FAMILY NOT NAMEDcoord: 68..332
coord: 244..476
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..935
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availableTMHMMTMhelixcoord: 7..26
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 111..439
score: 28.495

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1083contigP-lacustris_contig1083:51481..58651 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1083.706.1mRNA_P-lacustris_contig1083.706.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1083 51432..60992 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1083.706.1 ID=prot_P-lacustris_contig1083.706.1|Name=mRNA_P-lacustris_contig1083.706.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=936bp
MRHVLSSVLSACVAVFTTLLYQWWLTPQVQQHDNTAAVPPKIGSKDQQLP
SSNTYPPSPTTVNLAQALSLGRVLLSRGEYEEAALVYLVAASAAATVSGI
AGNAGTAHEHGEAKHGLGLALLATGRTADALEACREAERLDPHFAAASAG
IGAVLTELGDTGGALTALRHAADKADRGGGAAGVLREAEGTADAIRGRLG
ATLLAAGDVDEAIAVLTTVELEMRRAGAAGDPHVAYNLGVAWQTKGETDK
AIAAYSRAADLAPTLAPPRVNLGAQLLQSGRLSEAEAVLWSAVELACDDP
PSLAAAHANLGALLQRSGRFDQALESYSRAVRSGAGRSSLMHIAKLHQKL
GQPEHALEACRRCVVRGDSLDTSPLLMAGLILESLGNIEAAADHFAKVVQ
QDAESIEATMHLGTCQQRLGRHHEALASFVAASRLEPENPVIYELVLATV
SEVKRALGGDAHHNRADRVDDGNSEREGQDAVGTFGKEEFPGRVAKQSKE
TQSVCVEQAGQRPAASDDGIVAGEAAPLTQAEMILEERALVDPHIPGTGG
SGAAVAADPADGILLPDDSSPDGVIDVQASGLGGSDRMTVASSAVPEHAR
SVAAGNAGGKPTSVGENNNLDGGGLETSAAGVHSQATAASSSGTATSVLA
EAASLDSVRIEDELATERYGNTGLGVAVNNADQGTKAPVERVKGLVLPPT
SGEDIPYGNGTIGSAMAVDLGEAAATVDTETKPKSHQEEEGESGTMVYSW
DVSVEEEGEVEERGWLSGTIVPITDAERGFPSPPLKNAKGEQVADDAYYA
DKKSDDSVGEGEEDPRGDHMARSDPVADLGRPVAPSIVKAHDEVVIGEDD
GTTISLEHDSSIGLEGDAATLARNIVENVPRAVDEDVVHSMEEELAAHAE
TQGTKTLGDSSVDEVVDGLKALLMPKTAQWKMLLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom