prot_P-lacustris_contig1077.663.1 (polypeptide) Pleurocladia lacustris SAG_25_93

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-lacustris_contig1077.663.1
Unique Nameprot_P-lacustris_contig1077.663.1
Typepolypeptide
OrganismPleurocladia lacustris SAG_25_93 (Pleurocladia lacustris SAG_25_93)
Sequence length923
Homology
BLAST of mRNA_P-lacustris_contig1077.663.1 vs. uniprot
Match: D7FNN5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNN5_ECTSI)

HSP 1 Score: 589 bits (1519), Expect = 1.200e-195
Identity = 418/792 (52.78%), Postives = 492/792 (62.12%), Query Frame = 0
Query:  172 TCVAGRPAVVAEVDSAVKKSEKSLTFKSGGSQGATAQPSSTTREREYDLSHALDRLVPRLHQSEQRVTFLEACLEQAKQAESGRNALIKQVTSLDEETKLLRHRLEMRHTEALESRERRRSLEADNARLSAELRSASGQISRLETETRRKDALLAEARDGADVQSRQXXXXXXXXXXXXXXXXXAERDKKRAWQTTNASAETAKVAIMRAEAAVNEASDIRT--------------KVHVERQPERQRDQSLADVVAAAAAAPNRGGPEDIRRAWVGGGSDLLQTWPQAGRDPSKRRARSLSFERACSVEHTEPTAADSIAGNANHKYRRRSAADI-NTSTVASRNIPPRAVATTTSYPSLRGVFL------HRKDGTTWGMDIDESSPLSVPQERSGSERRMPTIIEIASPLNRATGRELWDEGDRQRHDSEGVKRALTGANPAWTDVPSLSGGGSPKVTEGCGDSENCALGRRLLEGGSTGSAIGIIPKAY----RARRE--DRGEICGGHA---IDEVGLSAEEHARTDVGDDAPRGDVLLRVYYP--AAGHKRGRDLMSSRRSSLSGAGVGVIAVTGEGYETCQVEPGSAPEARHVLAANGTQNIIANSDAFDERQVTTNGSAEREVSPSTAASISLAAANDGSST--------ACTTKVSELGRRQSSTQNPPARVSTVSLASLVGNNDSCGVSDKEGGLRRT--VSAPFATDAEEDELRPVREMERRLMLLQMEVSQLEAEQNKLRPKASKTMQARVQMREIDSRLALLATESFTLRRIIREKPWR 921
            T +AGRP V    D  V  S++ LT    G+ G T +  +  RERE +L  ALDR+VP+L Q E+RV FLEA L+QAKQ ESGRNALIKQ+T+L+EE K  R RL+ R  EALE RERR+SLEADN RLS EL SA G+I+RLETETRRKDALL EARD A  ++ +    XXXXXXXXXXXXXAERDKKRAWQ TNASAET K A+MRAEAA  EASD+R               KV  E +   +  QSL D +AAAAA  + GGPE +RR+W    SDLL   P AGRD  + R  SLS     SV+HT   AA  I  +AN+  RR S A I NT+     +IPPR VAT   +P+  GV L        ++   W  DI  SSP   P+E++GS RR+  +IE  +   R TGREL   GDRQ HDS GVK ALTGANPAWTD P LS GGSP+   GCGD EN   GRRL E    G A+   P  Y    R   E  DRG++C GH    IDEVGL  +  A  DV +DA   D    V  P  AAG +RGRD MSSRRSSLSGAG GV+ VTGE      +EP  A + R VL      N + + ++FDE Q T  G    + S STAAS+   A    S T        A  T+ S   RRQS    P  R S+V+   L+G +DS GVSDKE   RR    SAPFATDA EDELRP RE+ER+L LLQME+SQLEAEQ KL PK SKTMQAR Q+REI+ RLA+LA ES  LRR++REKPWR
Sbjct:    2 TTMAGRPPVARAADGVVASSDEPLTLVGDGNHGETTKARTIGREREAELKQALDRIVPQLLQKEERVKFLEAGLKQAKQDESGRNALIKQITTLEEENKQSRQRLDTRQAEALEWRERRQSLEADNERLSTELHSALGRITRLETETRRKDALLTEARDSATARAEKNSTFXXXXXXXXXXXXXAERDKKRAWQATNASAETVKAAMMRAEAAAKEASDLRILQNSVRWQDANSGEKVSFEGRAVNKPGQSLTDALAAAAA--DGGGPEAMRRSWGAVESDLLHNVPAAGRDVIRHRTSSLSTAVGRSVDHT---AAVDIVNHANNNLRRTSTAGIENTTATGVNHIPPRDVATAVGHPASHGVSLGNILIEREEENDAWRTDIAVSSPSKEPREKTGSGRRVHAVIETNASPTRPTGRELCLIGDRQHHDSAGVKGALTGANPAWTDTPPLSQGGSPEAIGGCGDRENLGNGRRLFERSGDG-AVNSTPITYGEECRTGEECRDRGKVCSGHGERTIDEVGLRDKARAGEDVINDASTADFSFMVPRPCPAAGCRRGRDSMSSRRSSLSGAGAGVMEVTGE---ASGLEPDRATDVRQVLPTI-FDNEVGSPESFDESQATRKGLMGHKASQSTAASVKSDAVESRSPTDHSRFGMSAFATRASGPWRRQSCAAVPNERFSSVTQGRLLGTSDSPGVSDKEAITRRERRASAPFATDAAEDELRPAREVERKLTLLQMEISQLEAEQTKLLPKTSKTMQARAQIREIEGRLAVLAKESSRLRRVLREKPWR 783          
The following BLAST results are available for this feature:
BLAST of mRNA_P-lacustris_contig1077.663.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FNN5_ECTSI1.200e-19552.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 283..317
NoneNo IPR availableCOILSCoilCoilcoord: 856..876
NoneNo IPR availableCOILSCoilCoilcoord: 231..251
NoneNo IPR availableCOILSCoilCoilcoord: 339..359

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-lacustris_contig1077contigP-lacustris_contig1077:23434..27167 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pleurocladia lacustris SAG_25_932021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-lacustris_contig1077.663.1mRNA_P-lacustris_contig1077.663.1Pleurocladia lacustris SAG_25_93mRNAP-lacustris_contig1077 23434..27167 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-lacustris_contig1077.663.1 ID=prot_P-lacustris_contig1077.663.1|Name=mRNA_P-lacustris_contig1077.663.1|organism=Pleurocladia lacustris SAG_25_93|type=polypeptide|length=923bp
WAPFFLGNGIIATLATTNEHNNTHNIVADLFPTGFSSSSADETPPAATAA
AKHPDGVITTKSILERKEPVLLAPGAVTLFSPNCLVADFVSEGQARQLLP
SPVNAKERTRHQRSSFLIPPLEPSLASSPQQVGHPDLRQHLLCHQPNTNP
KVGERSPSIAEPTGWASPKGTTCVAGRPAVVAEVDSAVKKSEKSLTFKSG
GSQGATAQPSSTTREREYDLSHALDRLVPRLHQSEQRVTFLEACLEQAKQ
AESGRNALIKQVTSLDEETKLLRHRLEMRHTEALESRERRRSLEADNARL
SAELRSASGQISRLETETRRKDALLAEARDGADVQSRQILTLQIELRHKD
QLLEEAERDKKRAWQTTNASAETAKVAIMRAEAAVNEASDIRTKVHVERQ
PERQRDQSLADVVAAAAAAPNRGGPEDIRRAWVGGGSDLLQTWPQAGRDP
SKRRARSLSFERACSVEHTEPTAADSIAGNANHKYRRRSAADINTSTVAS
RNIPPRAVATTTSYPSLRGVFLHRKDGTTWGMDIDESSPLSVPQERSGSE
RRMPTIIEIASPLNRATGRELWDEGDRQRHDSEGVKRALTGANPAWTDVP
SLSGGGSPKVTEGCGDSENCALGRRLLEGGSTGSAIGIIPKAYRARREDR
GEICGGHAIDEVGLSAEEHARTDVGDDAPRGDVLLRVYYPAAGHKRGRDL
MSSRRSSLSGAGVGVIAVTGEGYETCQVEPGSAPEARHVLAANGTQNIIA
NSDAFDERQVTTNGSAEREVSPSTAASISLAAANDGSSTACTTKVSELGR
RQSSTQNPPARVSTVSLASLVGNNDSCGVSDKEGGLRRTVSAPFATDAEE
DELRPVREMERRLMLLQMEVSQLEAEQNKLRPKASKTMQARVQMREIDSR
LALLATESFTLRRIIREKPWRM*
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